TCONS_00015494 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015494
Unique NameTCONS_00015494
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1435

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015494 ID=TCONS_00015494|Name=TCONS_00015494|organism=Clytia hemisphaerica|type=transcript|length=1435bp
gtcccaatcttcagtagaacaggtcatatttttccagctggtcccaatct
tcagtagaacagaccatatttttccagctGGTCcaaatcttcagtagaac
agaccacttttttccagcagacttttttctttagttcgctaagaTAAGAA
Cagccgccatatccagctggaacgtgccttcagaacagatattttgaagt
cccccttcggtggatgctttcgtaaGAAGGCTTTCTGATGCCACCACGTT
GCTTTTGGTAACTAGAATAGAATTTAATATACCTGTATGAATCCCTTTTT
TCAAACACACTGTCAAATTTACTGTTAGAAATTCTAGGAAAAAAGTCGAA
TATTCGAACGTGGACCACGCAGCACGTGATGTCGGCATGTTCGTTTTCTA
AATGCTCGCATTTGAGTGAAATGTAATCCGTCAAGCATAGGAATGAAAAA
AAAGCTGTCCTTTTTTCGGTTTTAGTTCTGTGAACTTTCGAACCCTCTCA
ACATCTTAACGGATGAGAAAGTTTTAACATCTGCGAATCTTGATACATCG
TAGCTCATCAAACCTTAGAGCCTATCTACATCTTAAAGTTTAGTGTACGC
GGGGCTTTAAGAGCATGCGCCAAGAAagtcaaaatcaaagaaaattttgg
agCCGAAAAAGAAAGCAGACAGCACAGCAGACAGGCAGAGAAGAAGTTCT
GAATCAGGATCTTTCCAAGAAGAATGGCTGACAGAAAACGAAGATTAGAT
GTTGATGGAGCATCATCCAGCTACAAAAAGATGAAAGAGCAAATCCTTCA
AACCACCCCAAAAACAAGTAGCAGtttctCTTCCATACCTGCAAAGATAG
TGTCCGGATACAAAGAAAATCTTCCACCACTAAATCCTATGAATCAAAAG
CCATGGAGTGAACGTTTTAGAACCATCCTGAAAAAGCGCCTGAACTTACC
AGTATGGGAGTATCGAGATGAGTTCATCAAGACATGCAGTGAAAATCAAT
GCGTTGTTTTGGTGGGAGAAACTGGTTCAGGCAAAACTACACAGATTCCA
CAATGGTGCTTAGATTTAGTAATGTTGGGAAAACGTAAGCACGTCTGTTG
TACGCAACCACGTCGAGTAGCTGCAATGAGTGTTGCTCAACGTGTTGCTG
ATGAAATGGACTGTGTGATTGGTCAGGAAGTTGGATATTCTATTCGTTTC
GAAGACTGCTCCAGCTCAAGAACTGCAATGAAataCATGACAGACGGTAT
GTTGCTAAGAGAAGCAATGACAGATCCTTTGCTAGATAGATATGGTGTCA
TCTTACTCGATGAAGCTCACGAACGTACCCTTGCTACTGATATCTTGATG
GGTCTTATTAAAGAGGTTGTTAAGCAACGTCCTGATTTAAAGGTTATTAT
TATGTCTGCCACTCTTGATGCTGGTAAATTTCAAN
Run BLAST on NCBI

transcript from alignment at sc0000212:54778..69960+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015494 ID=TCONS_00015494|Name=TCONS_00015494|organism=Clytia hemisphaerica|type=transcript|length=15183bp|location=Sequence derived from alignment at sc0000212:54778..69960+ (Clytia hemisphaerica)
gtcccaatcttcagtagaacaggtcatatttttccagctggtcccaatct
tcagtagaacagaccatatttttccagctGGTCcaaatcttcagtagaac
agaccacttttttccagcagacttttttctttagttcgctaagaTAAGAA
Cagccgccatatccagctggaacgtgccttcagaacagatattttgaagt
cccccttcggtggatgctttcgtaaGAAGGCTTTCTGATGCCACCACGTT
GCTTTTGGTAACTAGAATAGAATTTAATATACCTGTATGAATCCCTTTTT
TCAAACACACTGTCAAATTTACTGTTAGAAATTCTAGGAAAAAAGTCGAA
TATTCGAACGTGGACCACGCAGCACGTGATGTCGGCATGTTCGTTTTCTA
AATGCTCGCATTTGAGTGAAATGTAATCCGTCAAGCATAGGAATGAAAAA
AAAGCTGTCCTTTTTTCGGTTTTAGTTCTGTGAACTTTCGAACCCTCTCA
ACATCTTAACGGATGAGAAAGTTTTAACATCTGCGAATCTTGATACATCG
TAGCTCATCAAACCTTAGAGCCTATCTACATCTTAAAGTTTAGTGTACGC
GGGGCTTTAAGAGCATGCGCCAAGAAagtcaaaatcaaagaaaattttgg
agCCGAAAAAGAAAGCAGACAGCACAGCAGACAGGCAGAGAAGAAGTTCT
GAATCAGGATCTTTCCAAGAAGAATGGCTGACAGAAAACGAAGATTAGAT
GTTGATGGAGCATCATCCAGCTACAAAAAGATGAAAGAGCAAATCCTTCA
AACCACCCCAAAAACAAGTAGCAGGTATTatcttttcttttaatttttca
gggaGAGGGGTAtaagtttgttaaaaaaattgccgtacGAACAAGGGGAA
CctcttcatacaaaatttacgtgaaacacatatttggacttcATACCCAA
TATTGCATGCAAGCACTTAcggtgagattgggtaacttgcatcagtggag
gctaaaatgcatagccctcaaatgaatgacctgtcttgTNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNcctttcgtccaaagcaaaagacttgcttttc
tcgccgccatcttgttttagaatgagaattattttcagttCCAGTTCCCA
CGGTCTTTAGTTCATCCagtcagatcgcgcgatttcacttttgctttctc
tagtccaataagactgcgggatttgagtcatttgacatctctattgaaaa
acccgcgcagaataaaatagaaatacagggggtcacactactggctacag
gcagtgtagctggaacctcaatattccaggattagaaaaagctatacctg
ttatcttttttctttaaaccattttaaagaatcaacaagccatcaacatt
gataaattacacacatttcctcagaaacttttaaaattatctgccattat
gactttcttgaaagccgttccgaaattaaccaatcgggttatgtgtcaga
attcctatgggaattcttttccgagatttgtaaaatagctaagtcggcaa
aaaaacttttcctgggggtttgaggggaaaacagaactgctatcatttgt
tttttatttaaccatatatttaaatttgcgctcaaaaatatttaaataaa
taagttaacaatattcaacacactatttgtatctctcagaaaataaacac
ttacagaacgacatagtttatcatttggaatacccccgtatttggaccat
tctatcgtgggtgcaaaatagggcggaaactaagtagcaccctcagtgga
AAATTACCGCCTcgtctttattcgcccgcgtgAGAAtacgagctaatcat
ttttttctcgagcgctcaaggggaaaaggaaagtgatcaatattctttga
aggaaaaacgtcagaaacaaacccaatgaccaaaagatgtattttgttgt
tgacaatcaatcctgtgaagatgaaaaaaaatttttcggaacgttaaaaa
actctaatttcgatcttttcttaaggtaaagaggttgtgacatttgggtt
agcgaggcaaaaattgctaaaaagctggtaaaatcgtaatcctcaaaaat
cgaagttccagcctcaaaaaaattaaggccaatatgtttggtttttctga
aggacaaaaggtatgggaagctttactgaaggagggataaggctgggact
atctatttaaaagatatggacaaaaaaaggcacttttttgggtgataatt
gagattttacttagaaactttaattcttttacccccgtctcggccccccc
tgatatgagcaagggaaccatgttggccacccctgctgaaaatttcagat
caaaacaaacaaggagttgattcctgtaactcgatgaaaattggaaaaag
ctgcagtttttgactgtttctgatcctaaagtgctatttatTGGTAAatg
ctatgcaatttatgtttggatttctagaaagcttacccattcattgtcaa
tatattttttatttgaaagtaatctcttcatggaataaaaagatatatag
tcaaatcttgtagggtcatttttcaaaaaaatttctccgaaataaatttt
cgcatttcgccattttaccctacgcaaacgcacgtgagtcaggccacgtg
cgtttggttttggaaagcgaaacacgaacgcgaactaccaatgtcaaaac
ttttcaatattatctccagaactaacagattttttgaaattctgtaaaat
gGTCCAAGTTCCTGagtagttttactatgttctgtgaaaaattCATAACC
ATCAGagaaatactcgttcatctatttaagattgaagacaaaaatttccg
aagaaaaataaacctttagcaaaaaaaatgcttttttaaacacttttttc
caccgaaaaacttttatagacttatcttccccaaacattgaagaagcctc
tactaattcaagtaaatgagataagataagataaaaccttaaaatcaacc
agaatttacaacctttcgtccaaacagtgtggctcgaatccttcagatcc
ttggttagaaaaagctatacctgtttacttttttcttgccagtttcaaca
agccatcaaccaacaaaattacaACTAACATCTGAAAATTCACACGGCCT
TTCCACAGtagacacttctaaattatctgccattatgaagatgttccaaa
attaaccaatcgggtttacaatcggaattcctctgggagttagcgagttg
ggaaatgtaaagttacgtaataagaaaatactgtttttccgggggttaaa
catataaaagaaaattgaaacggtttatttttttcttcattaatatattt
aagtttccgttatcaaaattctagaaatgctaatttgtagaccatattac
aaaatgtttatatatttcgcaaaataaacacttacaaagatattacttac
tatttttacccccgctttTTAAACATCGTCTTCTGTGGGCGTGATATCAG
GCAAAGACAAAACGCCCTCATTGTAAGATTCTCGGGTCATCTTattgttt
gtttcttttgtcAAGTCTGTTGGTCCTATTGTTCATGCTAAATCCATACA
CGATGACGTCAACGTTTGGcggcatacctgaaaataaaaacataaagatt
attattatttttgcataaattaatgtttttttatgcaatttatgtttgga
tttctagaaagcttacccatccATTGTCANCGCTACCTTATACgttatta
taaaattatacaaaacgaaaGCGAGTCTAGGCCGCCCGCCTAGAGAGCGC
AagccctaatattttttctctcgcggcCTTCAGggaaaaacgaaagtgat
caatattcttCAGAAGGAAGAACTTGCCAAAAAAACCCTAGACAAAAAGA
TGATTTTCgaggttgggaatggatcctgcgaagatgaaaaaattctgact
agggttttttttggcaaacccaaaaactctaatttttttcttccctcaag
ctaaaaaggttacgggttttgggcaattgaggcaaaaatcagcaaaaagc
tggtgttttccgtaaatctgagaatcgcgataagatcctcactgccaaag
caaaagacttgcttttctcgccgccatcttgttttagaatgagaattatt
tttgtGTCAGTTCACATGGAAATTTTtacatccaatcagatcgcgcgatt
tcactttcgctttctctagtccaataagactgcaggatttgagtcatgtg
acatctctattgaaaaacttGTGCGAAAtacaatagaaatacagggggtc
acactactggctacaggaactgaaagcaaacaattaagtccaatattttt
ggtttttctgaaggacaaaaggtataggaagctttactgaaggagggata
aggctgggactatctatttaaaagatacagacaaaaaaggcacttttttg
ggtgataattaagttttacttagaaactttaattctcttacccccgtctc
gggcccCCCCTGATATNattttacttagaaactttaattctcttacccac
GTCCTACCCCCcttgatatgagcaagggaaccatgttggccacttctact
gaaaatttcagatcaaaacaaacaaggaattaattcctgtaactcgatga
aaattggaaaaagctggtttttgactgtttctgatcctaaagtgctattt
tttggtaaaagctatgtaATTTaggtttggatttctagaaagcttaccca
tccattgtcaatatattttttataaagtaattgcttcatggaataaaaag
atatagtcaaatcttgtaaggtcatttttttaaattttgccaaaatcgat
tttcacattttgcaattttaccCTACACAAACGCACAtgaggctagctct
aaagctctaaaacagcatctaataacatgaaaaccagaatatgattcttc
aatgggaatcaaggGGCCATCAATaaatgaaaatcctttttttaacGGTC
TCAAGCCGTTAAGACTCtgatatgtcagatctaacaaaattaataatagC
ACcatgtcatcattgacaataaaacaaaggattttctgtcaagagctttg
taaacattccaacaactttcatcgaaatgatctgtcactCCCACTGCAAC
ACTGCtagagtctaccatttttagtgcGGTCAGAGGAgaagtccaaatat
gtgtttcccataatttttgtatgaagagttcaGTCTATACAGTCTTGCAA
TAGTGGATGTTCCTAAAAAGAACTGTCAGGGTTACTTTATTCATCAGtca
gtctaagcttaaactcTTATATCAGGatttagaaactaggctagtcttac
gtcttttatctttccctttacatTTACATCTTTACATCTTCATTCATTTA
ACTGCATTTAAGAGCAAACAGATTTAtagaaaattgttaaaataaaattg
ttttttggggttggtaaagttcacctttgcagatttgagagtttagaagt
acattttgacagacttgatccttaaaaatggtagatcaggaggtaaagat
cttgatgaaagtttgtactatccccatgaaacttttcaaaaaccaaGATT
TCATTGTCTTAGAgggctcattttctgttcaatcttgagcaaaaattgtt
gttttgagcagcattgtcaagatttttaggattttagagtTAAGACAGAC
TTTGATAGTACAGTCTAATTGTGTAAAAATTGTGCACAAAGGCGTACAAG
CATTAGACTTTGCACAATTGaagtttaggggtcaaaaatggatttaaatc
tcagacccaaaaaattggcacctgtttgtgtattttacagaccagaacag
gTTTCCAGGctaaattaaatttcttttactccaaagtatgtcatgttaca
taccgttggaaagcatttttcatgctcgtttagaaaaacattacaaccta
tatctgaaaatgaagccaaaaaaagttattaaggaaaggctttttaaaaa
ttgcagaaaaatgacgtaattgctgatgtcagcaaaaattcAAGGACCAC
CCAAAAATGTTTATTTCTATCAAATTAAATAGagtcaaaagttacagcca
ttatttgtctcagctgcaaactatttcgagacagactttattataggatg
ctttcacaaaatcaagaatcaagtttcaatgggtactcattttgggcaaa
aatttcagccaaaaatgtacttttaagtcaatttttcaaaattaaggtGG
TCAGGGGAGTTAGAAGCTGTCTTTGAGTGAAATTTCAGCCTCTTTAAATT
TTCCTGGAAACCTTTCTGGAATGTGATgaggaatcatgattttcagataa
aatttactttctaactgccaattactggcggcaatagaatgacctcagct
ctagtaaaaaaaattgaaaaaaagcctttttggcccataaaagcacattt
gacaacttttttcacctagtttcattgtttttatacaaaagattcatcat
agcccttatattataaaaattcagtgacctagacccctttgaagtttgcc
aatgggccaaagggccaaaatatcccaaattttagtcatttttcgagTGA
TGTTAAGGATTTGGGATTTTACTAAGTTCATTGCACTTAAAAACATAtcc
caaaatccaaaaaaatctaagtttcaaactattggaactGCCCCAGACTG
CCCCAAACTgccccattcttaaaaaaactggctcttaataATTATGGTAT
CGAGTCATTGTATAATAAAAGGGAAATCGTGAAATTTTTATCACATTATT
AGAAAAATACAATTagtaaaagaaatatttttcaatagttTTAGTGGACA
ATAGATATCCAATCAgtatctttataaaaacaatattatttattttcttt
cagtttctCTTCCATACCTGCAAAGATAGTGTCCGGATACAAAGAAAATC
TTCCACCACTAAATCCTATGAATCAAAAGCCATGGAGTGAACGTTTTAGA
ACCATCCTGAAAAAGCGCCTGAACTTACCAGTATGGGAGTATCGAGATGA
GTTCATCAAGACATGCAGTGAAAATCAATGCGTTGTTTTGGTGGGAGAAA
CTGGTTCAGGCAAAACTACACAGGTAAGACTTAAATGATGTAATAatagt
tttttgaattttgttgttGCTGTCGTTTTCTGTCCAAGCAGTTTGATTAG
TGACCTGAAGTTCAGGATGCAGTGTCAGGGAAGTTGAAAAAGAGGCTCCC
TGTCTCAAATATCCACacaatttgtcaaaatttgaagaatctgAAATTCT
ATGCTGtgaaaaaaccagtttttcatCTCAGCAGGGGGGATATcgagtca
gtgtactggcccatagctggtggggtggtgtattttttaggttaaattga
gttagtacactgtactaaaagggtggtcctctgtctctgagaaaaataca
atgaaaaagttagtacactgtactaaaaagggtggtgttctgaattgata
cacactgagaagttagtacattgtactaaaaagggtggtgttcTGAATTG
ATACACACTGAGAAGTTAGTACATTGTACTAATTTCAGTGGTAAAAATAC
ACAGACCCAGAGAATGCCCATGTATATTTGCCCTAATTTGCCAGGTCCAA
GCTGGAGACCTTCAAATCAAGGCTGaagctaaagtctgtctcgaaataat
ttgcagctggagaaataaatagctgtaacttttgatagaattcgaatcac
gttacggttttgtgctcgttaaaaagatattcgtgagtggaatattatca
agtaaaaaaattgagaaaaaaaaggaaaatgaaaatgaaaaaaagaagaa
gaaaaaaattaacttcttgtagaaatgtggtataattatcattttcacag
gagtgactcttcaatctttattcatcatcactgtgaaaaaattttNNNNN
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NNNNNNNNNNNNNNNttacttgataatattccactcacaaatatcttttt
aacgagcacaaaaccgcaacttgattcgaattctatcaaaagtcacagcc
atttttttctccagctgcaaattatttcgagacagactttacactgattt
tctcccaatgtttcctgtttacttgattggatttgtttcagAGTCGCAGC
ATgcacaagtggagaccggccttaagtccaatcttttttacattttcttt
aaaactttatctacattatggcaacaaaagaatttgaatgtGTAAACGTT
CAAATCGAACCTTTCAAGTCACTTActtttctatttcaaaaaagaaaaac
tgctaCAGCTTGCCAGACAACCAGAAATCAAGTCATAAAAGGGAAATAAC
TCAAAGTTGGTTTTGAGTATTTTGACTTGCTAATTTCACTGTATTCGAAt
gactttgtctgcttcattgtTTCAGTGTTTGTACTACAAGGATTCAGATA
TTTtaaatattcaaatctttccttttatataatttggtgcttttcttagc
aaaaatgcttcaaaaccttTGTATATGGTGGTAATTAAACTTATCTGGCC
AAGGAGAAATTAAaacagtgcactataagggaTGGTTTCTAAACTTATCT
GATCTAAAAAACAGCTAGTatagtgtactaaaagggtggtatcaaaaATC
CGGTCATGGAGAAAAGTCAGTACAGTGTgctaaaagggtggtgtcaaagc
tcCGGCCGTGGAAGGatgttagtacagtgtactaaaagggtggtatcaaa
aATCTGGTCACGGAGATGAGTCAGTACAGTGTgctaaaagggtggtgtca
aagctcCGGCCGTGGAAggaagttagtacagtgtactaaaagggtggtat
caaaaATTCGGTCGTGGAGAAAcgtcagtacagtgtactaaaagggtggt
gtcaaagccccgaccgtggaagaaagttagtacagtgtactaaagaGGGT
GGTggtctatttttttttcaaaaatcaagttagtaccctatggtccagta
cactgacttggtacccccccccctcctgaTCTCAGATGTTTTGTTCACTC
ACACTAAAGGGGCACTAATAACACTGCAATAGTAGTATTGATCAATTTAA
TAGTTGTTATATTTCTGACTTGAAATTATTTTCCTGAATActgaaaattt
gtacaaaaaattttcggcaaaataaagtaaaaactttatttttaccCTTA
TTTTTATCCtgattaaatttaaaagaaaaaaagaaaattgttaaaacTTT
CCAAATACGCAAAAAAGTAGTACCTAATTTACCAACTACAACCCAGGATT
TTTGATTCGACAGCCATGCCAAGTGCTAAAAGGTTCTGGTGTCTTAATGT
ACGACTTATTATTTCTGAACGAGAGTGGAACAATCTTTGCAATCTTTTGA
TTAAAACCTGTTGTTTTTACTTCAGATTCCACAATGGTGCTTAGATTTAG
TAATGTTGGGAAAACGTAAGCACGTCTGTTGTACGCAACCACGTCGAGTA
GCTGCAATGAGTGTTGCTCAACGTGTTGCTGATGAAATGGACTGTGTGAT
TGGTCAGGAAGTTGGATATTCTATTCGTTTCGAAGACTGCTCCAGCTCAA
GAACTGCAATGAAGTAATACTTTTGTTTTTACAGTTTAACTTTTCAATTA
GGTAGCACTTTCAAACTTAACTTTTAAGTATTCAGtattcaattataatt
tttctcTTGATTGGTAGAAAGTTGATCTTCATTCTGTACTTCCAGCCCCT
TcctttttatagaaaattttaGGGTGTAACTTTCTTCActttctaggggg
gggggctgatgCTCAGAGAAAGTTGATCTTTACTATGGTTGACAGTCGAG
TGAGTTGAAACAATCTAACAAGTAATAAAATACTGGTTTCCAAAACCAGT
GCTTTATTTCTTGTTAGATTGTTTCAACTCACTCGTGCAACCAagcttca
ttttcttttattaaGCTTTCTTTCCTACTAATTCTgcgattttaattttt
cagataCATGACAGACGGTATGTTGCTAAGAGAAGCAATGACAGATCCTT
TGCTAGATAGATATGGTGTCATCTTACTCGATGAAGCTCACGAACGTACC
CTTGCTACTGATATCTTGATGGGTCTTATTAAAGAGGTATAAGTTGTCAA
GTTTTTGTGAATCAATCTTGAGTCCATTCTATTCATTCTGTCATCTTGTT
CTTCTGCTATCTCGTTATAGTTCAAACAATAAACAAAGAGCTTGTTATTT
ATTTGAAGGCTGATTAACTCAAATGATATtcaattcacaaaatttaaatT
GCAATACTAATCTTTTGTAGGTTGTTAAGCAACGTCCTGATTTAAAGGTT
ATTATTATGTCTGCCACTCTTGATGctggtaaatttcaaaattattttgg
tgATGCACCTCTTTTGACTATCCCTGGCCGTACCCATCCTGTAGAGATCT
TCTACACTCCAGAACCAGAACGTGACTACTTGGAAGCTGCTATTCGTACT
GTCGTTCAAATTCACTTATGTGAAGAAGTCGAGGGCGATCTCCTCATGTT
CTTGACTGGGCAAGAAGAAATAGACGAAGCATGTAAAAGAATTAAACGTG
AGGTCGACAATCTAGGACCAGAAGTCGGCGACATGAAGATCATTCCACTC
TACTCTACCCTTCCACCGCAATTGCAACAGCGTATTTTTGAGGCTGCGCC
ACCCAAGAAAGCCAATGGCGCTCTTGGTCGTAAAATTGTTGTATCAACAA
ATATCGCTGAAACATCTCTGACTATTGACGGTGTCGTTTTTGTCATTGAT
CCTGGATTCTCGAAACAAAAGGTTTGTGCACTTACTcgggggaatttttt
tttcagaaaataggaaaagggggggttttcaaaaatctagggGGGGGGGN
TAAATATTCAGTATTCAACTATAATTTTTCTCTTGATTGGTAGAAAGTTG
ATCTTCATTctgtacttccagccccctccttttTATAGAAAATGGGGGGG
GCTGATGCTCAGAGAAAGTTGATCTTTACTATGGTTGACAGTCGAGTGAG
TTGAAACAATCTAACAAGTAATAAAATACTGGTTTCCAAAACCAGTGCTT
TATTTCTTGTTAGATTGTTTCAACTCACTCGTGAAAGCAagcttcatttt
cttttattaaGCTTTCTTTCCTACTAATTCTgcgattttaatttttcaga
taCATGACAGACGGTATGTTGCTAAGAGAAGCAATGACAGATCCTTTGCT
AGATAGATATGGTGTCATCTTACTCGATGAAGCTCACGAACGTACCCTTG
CTACTGATATCTTGATGGGTCTTATTAAAGAGGTATAAGTTGTCAAGTTT
TTGTGAATCAATCTTGAATCCATTCTATTCATTCTGTCATCTTGTTCTTC
TGCTATCTCGTTATAGTTCAAACAATAAACAAAGAGCTTGTTATTTTAAA
GGCTGATTAACTCAAATAATATtcaattcacaaaatttatatTGCAATAC
TAATCTTTTGTAGGTTGTTAAGCAACGTCCTGATTTAAAGGTTATTATTA
TGTCTGCCACTCTTGATGCTGGTAAATTTCAAN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008651XLOC_008651Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015494-exon-sc0000212-1491911889:54778..55601TCONS_00015494-exon-sc0000212-1491911889:54778..55601Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1510915933:54778..55601TCONS_00015494-exon-sc0000212-1510915933:54778..55601Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1575043694:54778..55601TCONS_00015494-exon-sc0000212-1575043694:54778..55601Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1491911889:63331..63550TCONS_00015494-exon-sc0000212-1491911889:63331..63550Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1510915933:63331..63550TCONS_00015494-exon-sc0000212-1510915933:63331..63550Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1575043694:63331..63550TCONS_00015494-exon-sc0000212-1575043694:63331..63550Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1491911889:67803..67990TCONS_00015494-exon-sc0000212-1491911889:67803..67990Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1510915933:67803..67990TCONS_00015494-exon-sc0000212-1510915933:67803..67990Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1575043694:67803..67990TCONS_00015494-exon-sc0000212-1575043694:67803..67990Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1491911889:69577..69709TCONS_00015494-exon-sc0000212-1491911889:69577..69709Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1510915933:69577..69709TCONS_00015494-exon-sc0000212-1510915933:69577..69709Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1575043694:69577..69709TCONS_00015494-exon-sc0000212-1575043694:69577..69709Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1491911889:69891..69960TCONS_00015494-exon-sc0000212-1491911889:69891..69960Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1510915933:69891..69960TCONS_00015494-exon-sc0000212-1510915933:69891..69960Clytia hemisphaericaexon
TCONS_00015494-exon-sc0000212-1575043694:69891..69960TCONS_00015494-exon-sc0000212-1575043694:69891..69960Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000212supercontigsc0000212:54778..69960 +
Expression
No biomaterial libraries express this feature.
Blast
[Close]
BLAST of TCONS_00015494 vs. Swiss-Prot (Human)
Match: DHX15 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Homo sapiens GN=DHX15 PE=1 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 2.730e-88
Identity = 141/210 (67.14%), Postives = 166/210 (79.05%), Query Frame = 1 
Query:  814 TSSSFSSIPAKIVSGYKENLPP-LNPMNQKPWSERFRTILKKRLNLPVWEYRDEFIKTCSENQCVVLVGETGSGKTTQIPQWCLDLV--MLGKRKHVCCTQPRRVAAMSVAQRVADEMDCVIGQEVGYSIRFEDCSSSRTAMKYMTDGMLLREAMTDPLLDRYGVILLDEAHERTLATDILMGLIKEVVKQRPDLKVIIMSATLDAGKFQ 1434
            T S+ S+           +LP  +NP    P + R+  ILKKRL LPVWEY+D F      +Q  VLVGETGSGKTTQIPQWC++ +  + G ++ V CTQPRRVAAMSVAQRVADEMD ++GQEVGYSIRFEDCSS++T +KYMTDGMLLREAM DPLL+RYGVI+LDEAHERTLATDILMG++KEVV+QR DLKVI+MSATLDAGKFQ
Sbjct:   92 THSTHSAHSTHAGHAGHTSLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQ 301
The following BLAST results are available for this feature:
BLAST of TCONS_00015494 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHX152.730e-8867.14Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
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