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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015394 ID=TCONS_00015394|Name=TCONS_00015394|organism=Clytia hemisphaerica|type=transcript|length=9672bp transcript from alignment at sc0000211:16992..44315+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00015394 ID=TCONS_00015394|Name=TCONS_00015394|organism=Clytia hemisphaerica|type=transcript|length=27324bp|location=Sequence derived from alignment at sc0000211:16992..44315+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Blast
BLAST of TCONS_00015394 vs. Swiss-Prot (Human)
Match: DYH7 (Dynein heavy chain 7, axonemal OS=Homo sapiens GN=DNAH7 PE=1 SV=2) HSP 1 Score: 4156.67 bits (10779), Expect = 0.000e+0 Identity = 2059/3193 (64.48%), Postives = 2552/3193 (79.92%), Query Frame = 2
Query: 140 PTKFLPSLPETRRKPEWQQI--NFKGPMKLDGDCVELTRSIDGNNKNNSLVKKTSHPLPPVKQQKRLSQVS------SSGKTGISYPKKDREAFRQALVSIIMQNEDATGSPKVPSVTDKDYEPGRPGSPSHAEKDVLRYYYYIHHGIDTKNVAPMEDVWIDNVLSLVPAATKMNLEELIEDLSDEVREDYLLSVKKAIVDFVLRDPREKENNVVEETLP-HRIEMMQVPKPWKQSFLSAYATMEHELHITNPTMMAVLSLWHKNYSALSLVNREDIKERNEAMELSFFQNLLMRHVENAKETLLKKWFPEVQNIFYQGNKRKLLPGTQQRKRLTAFFNSAAILMXXXXXXXXXXXXXEFESLLQPISQSSGRFARFTHPGFVIRLVLDGSTVKFEPDFHDFEVILLNVFDVMLKAVTVVPCVETKLYSEWSGQKK--YLRPNILDSILETLRNSVSKIVKQQSAGPIAHAREYDRFENLITSKAETEIEEYLLQSHTFEELAEEVSRYNALIDEISFDCQKVVSTGMFEMHCDEIIRTLTKRAENVRSRLLTKMLQDHSVANKALSNEYEAIAEKALTSPSNTEHLMELKSFIETVQNVTIFELESRLVNTKERLSFLVDFVTLSPGDIRNNNSVFQWHQRMPEVFQEHQKIVDANRLQYENALKLRRERFIDDLEGYAKQVEEFQTYGNMKEVNRYLKKAQALQQRLDAASEKIQAINEEEEAFGWEATNYPVRQHVATQLAPFLKLYESTVDFETQHTKWMEGSLSSSPDPDFIETETGNLWRGFYKLEKQFKETPNAMKIAMKMKTKVDSFKDHLPLVSLLFNPGLRDRHWESMSEIVGYPLQPDESSNLQRFVDMKLEPFLSKFEGISEAASKEYSLEKAMEKMSKEWTDIKFVVIPYRETGTHILSSIDDIQNVLDDQIVKTQTMRGSPFIKPFEDEIKSWEDTLILIQEILDEWLKVQATWLYLEPIFSSPDIMAQMPEEGRRFSTVDKTWRDTMKTVLQDEHVMTVAKIDQLLDKLKKSNELLELILKGLNEYLEKKRLYFPRFFFLSNDELLEILSETKDPTRVQPHLKKCFEGIAKLEFTDELDITHMKSSEGEVVPLNRSISTAEARGQVXXXXXXXXXXXXXXXREMIIASTAAYLKEVRTDWVRAWPGQAVLAVSQFYWTNGVQEAIKAGGDKLNDFLQINNKQIDEIVALVRGKLSKQNRATLGALVVLDVHARDVLEELSEDGVNDENDFKWLAQLRYYWEDDNMMTRMISAQLAYGYEYLGNSGRLVITPLTDRCYRTLFGALQLHLGGAPEGPAGTGKTETTKDLAKAVAKQCVVFNCSDGLDYIALGKFFKGLASCGAWSCFDEFNRIDLEVLSVVAQQILTIQMGINSGNDKLMFEGTEIHLDPSCAVFITMNPGYAGRSELPDNLKSLFRSVAMMVPNYALISEISLYSFGFVNARPLAVKIVTTYTLCSEQLSSQAHYDYGMRAVKSVLTAAGNLKLKYPDENEDILILRSIIDVNLPKFLAQDLPLFKGITSDLFPGISLPEPDYMTLTQNIKNNAEKMNLQLTEFMLDKILQIYEMMIVRHGFMIVGEPFGGKTMAYKVLAGALSDIKDQGLLDENKVQICVINPKAITMGQLYGQFDPVSHEWSDGILAVNYRAFATSQTPDRKWLIFDGPVDAVWIENMNTVLDDNRKLCLNSGEIIQLAPTTNLIFEPMDLEVASPATVSRCGMIYMEPHMLGWRPLTISWLNTLPKTINKETKELILENYDRLVPPLLNFLRKGGVKELSPTTDTNIVKSCMNLMDCLMDEFHDEEVIKKLNDREVAAWIECIFMFACVWSFGASIDGMGRQCFDEFFRELLQGPMSLEMKEKYHILDMVDGPARPYL-CPFPSKGDVYEYQFIKEGMGRWEHWSEEIKDAPPIPKDMEFNEIIVPTIDTVRYTYLIKHLVTHEKSILIVGPTGTGKSVYITDFLLKKID-EKYKPLIINFSAQTTAKQTQDIIMSKLDKRRKGLFGPPLGKKTIVFVDDLNMPARETYGAQPPIELLRQWLDHWNWYDLKDTSPIQLTDIQLMAAMCPPGGGRNPITPRFLRHFNKITINEFGENQMSKIFGRIMDWHMN-TKGFSQPFAALGQKLVGATVCVYKSAMSNLLPTPAKSHYLFNLRDFGRIIRGVLLSKPDTLGDENSLIRLWTHEVFRIYYDRLIDDEDRTWFTNNVKEVLKDELKSNFDELFAHLDRNNDGIIDDHELHALMFCDFVDVKSDPRPYLEVVEPDKVRKTVEGFLDEFNNMSKKPMNLVLFRFAIEHVARIARVLKQPRGHCLLVGVGGSGRQSLTRLAAFMADYELHQVEIARGYTSVEWREDLKVILRKTTEGDAPGVFLFTDTQIKEESFLEDLNNLLNAGEVPNLFALDERQEICEKMRLIDKQKEKAKQTDGSPLALFNLFIERTKEMLHIVLAMSPIGEAFRNRLRKFPSLISCCTIDWFQEWPEDALTVVAQRFLADVNLSSAVIKGCVKICKTFHVTTRDLSKRFFNELKRNNHVTPTSYLELISTYKTLLAQRQETVMKQKQRYEVGLEKLASAASQVSTMQVELRDLQPKLVVAQKEVDEVMKVIEVDSVEVAKTEKIVKADEAVANEQAMAAKAIKDECDRELAEAIPILESALAALNTLTPKDITVVKSMSNPPPAIKMVMEAICSIKGIKPDRVPDP-ATGKRVEDYWGPSKKLLGDMKFLDSLKTFDKDNIPPANVKIIRDKFLPDPEFVPDKIRSASTAAEGLCKWVIAIESYDRXXXXXXXXXXXXXXXEGELAEAMGSLELKRANLKEVQDKLAKLQETFDINTKKKEDLEKQVDMCSKKLIRAEQLIGGLGGEKDRWSKSAHNLGVTYENLSGDVLISSGVVAYLGAFTSNYRQEQTNEWTSVCKKIGVPCSDVVSPTHILGDPVKIRDWNISGLPTDXXXXXXXXXXXXXXRWPLMIDPQGQANRWVKNMEKG-SLSVIKLSDADYIRTLENSITFGNPVLLENVGXXXXXXXXXXXXKQVFKQGGSMCMRLGDSTIEYSKDFRFYITTKLRNPNYPPETAVKVTLLNFMITPEGLQDQLLGIVVARERPELEEEKNALILQGAENKRQLKEIEDKILEVLSSSEGNILEDETAIQVLSSSKTLSNEIAEKQAIAEETEKKIDLARLGFKPIAIHST 9670
P + LP L KP WQQ +F +K D + E S+ + +++ K+ K QV S+ K+ P K+RE FR LV++IMQ +DA VP D P +P + S EKD+LRYYYYIHHGIDT +VAPMED W+++VL LVP K+ + ++ LSDE+REDYLLSV+K+IVDFVL+DPREK ++ + LP HR EM +PKPW++SFL+A + + L+ NPTM+AVL LWH N+ L LV+ ++ +A+ELS FQN++MRH+++AKETLLK WFPEVQNI+YQGNK+K LP +L +FFN AA LM+ QLQ L L S+ +F L I+Q F HPGF++RL+LD T+KFEP+ D+ I LNV+DVM+KAV+ VP VETKLYS+W + K L+P IL+ I++ + + +++ ++S P H R YD+++ LIT KAE +++ +L ++H++E++ +E+ +Y LI+EI + K + GMFEMHC+E+IR L KRA+ + +LL KM +DH N L +E+E IAEKAL++P NT LME+K++I+ V+ + ELE RLV++K L+FL+++V SP D+R NNSVFQW+ RM E+F+EH+KI+ QY+ LKLR ERF+++LE YAKQ EEF ++G++++V RYLKKAQ L +LD A++KI+ N EEEAFGW + YP R+ + L P+L+LYE+ V+F + + W EG +PD +E + GN WRG YKLEK F ++P A+ + K+++KV+ FK H+PL+ ++ NPGLR RHWE+MS IVGYPLQP + S + F+DM LEP++ +FEGISEAASKEYSLEKAMEKM EW ++FV+ YRETGT IL+S+D+IQ +LDD I+KTQTMRGSPFIKP+E +++ WE L+L+QEILDEWLKVQATWLYLEPIFSSPDIM+QMPEEGRRF+ VDKTWRD M++V+QD+HV+TV ID++L++LKKSNELLELILKGLNEYLEKKRL+FPRFFFLSNDELLEILSETKDPTRVQPHLKKCFEGIAK+EFT+ LDITHMKSSEGEVV L ISTA+ARGQVEKWL+EL+ +M+ S+ ++ +T AY K R +WVR WPGQ VL VSQ +WT VQ AI G L +L+ N+QID+IV LVRGKLS QNR TLGALVVLDVHARDVL L + ++D++DF+WL+QLRYYW+++++ T+MI+A L YGYEYLGNS RLVITPLTDRCYRTLFGAL LHLGGAPEGPAGTGKTETTKDLAKAVAKQCVVFNCSDGLDY+ALGKFFKGL SCGAW+CFDEFNRIDLEVLSVVAQQILTIQ GIN+G D LMFEGTE+ LDP+CAVFITMNPGYAGRSELPDNLK+LFR+VAMMVP+YA+I+EI LYS GFV ARPL+VKIV TY LCSEQLSSQ HYDYGMRAVKSVLTAAGNLKLKYP+ENE+IL+LRSIIDVNLPKFL+ DLPLF+GITSDLFPG+ LP+PDY L IK+N MNLQ+T F +KILQ+YEMMIVRHGFMIVGEPFGGKT AY+VLAGAL+DI ++GL++ENKVQI V+NPK++TMGQLYGQFD VSHEWSDG+LAV++RAFA+S TPDRKWLIFDGPVDAVWIENMNTVLDDN+KLCL SGEIIQ++P NLIFEPMDLEVASPATVSRCGMIYMEPHMLGWRPL +SW+N LP +++ KE I+ +DR+VP + F+RK KELSPT+DTN+V+S MNL+DC MD+F DE +K+ NDRE + +E IF+F+ +WS GAS R F++ REL++ P+S + + + + + L PFP KG +Y+YQF+ EG+G+WE W +++K+APPIPKD+ FNEIIVPT+DT+RY+ L++ L TH+K + VGPTGTGKSVYIT+FLL +++ E YKPL+INFSAQTTA QTQ+I+MSKLDKRRKG+FGPPLGK+ +VFVDD+NMPARE YGAQPPIELLRQWLDHWNWYDLKD S I+L DIQ+M AM PPGGGRNP+TPR++RHFN ITINEF + M IF RI+ WH+ F F L ++V T+ +YK AM NLLPTPAKSHYLFNLRDF R+I+GV LS+P+T + RLW HEV R+YYDRL+D+ DR+W N ++E+L++ + +F ELF LD +NDG+++ +L +LMFCDF D K + Y E+ + D +R VE L+E+NN+SKKPMNLVLFRFAIEH++RI+R+LKQPR H LLVGVGGSGRQS+TRLAA MADY + QVEI++GY + EW EDLKVILRK EG+ GVFLFTDTQIKEESFLED++NLLNAGE+PNLFALDE+QEIC+KMR +D+Q++K KQTDGSP+ALFN+FI+ + LH+VLAMSPIG+AFRNRLRKFP+L++CCTIDWFQ WPEDAL VA RFL ++ +S + GC+ +CK+FH +T DLSK FF EL+R N+VTPTSYLELIST+K LL +++ VMK K+RYEVGLEKL SA+SQV+TMQ+EL L P+L VA KEVDE+M +IE +SVEVAKTEKIVKADE +ANEQAMA+KAIKDECD +LA A+PILESALAAL+TLT +DITVVKSM +PP +K+VMEAIC +KGIK D++PDP +GK++ED+WGP+K+LLGDM+FL SL +DKDNIPPA + IIR ++P+P+FVP+KIR+ASTAAEGLCKWVIA++SYD+VAK+VAPKK L AEGEL AM L K+A LKEVQDKLA+LQ+T ++N +KK DLE QVD+CSKKL RAEQLIGGLGGEK RWS +A LG Y NL+GD+LISSGVVAYLGAFTS YRQ QT EWT++CK +PCSD S LG+ V IR WNI+GLP+D+FSI+NGIII N+ RWPLMIDPQ QAN+W+KNMEK SL VIKLS+ DY+RTLEN I FG PVLLENVGEELDP+LEPLLLKQ FKQGGS C+RLGDSTIEY+ DFRFYITTKLRNP+Y PET+VKVTLLNFMITPEG+QDQLLGIVVA+ERP+LEEEK ALILQGAENKRQLKEIEDKILEVLSSSEGNILEDETAI++LSSSK L+NEI++KQ +AEETEKKID R+G++PIAIHS+
Sbjct: 38 PARALPQLSMVSTKPHWQQAAPSFHLSVKQDDESPE-PFSVKNEQSHAEYMERFG------KKGKLPHQVDDSYVGPSTSKSKGKSPHKERENFRSTLVNVIMQ-QDADLDSAVP---DGSTIP-KP-TASAIEKDILRYYYYIHHGIDTDHVAPMEDSWLEHVLDLVPQHLKVFTDSIVT-LSDEMREDYLLSVRKSIVDFVLKDPREKGDDKKTDELPAHRAEMEILPKPWRKSFLAASSYIRDHLNAMNPTMLAVLDLWHTNFKKLRLVDIKEFHNCQDALELSSFQNIIMRHMDSAKETLLKMWFPEVQNIYYQGNKKKQLPTGDSSAKLESFFNCAAALMTLQLQDLTLVSMQDFTDL---IAQPPDSVRAFEHPGFIMRLILDNDTIKFEPELSDYIDIFLNVYDVMIKAVSFVPRVETKLYSKWESKSKPTTLKPIILNEIVDAHKEKIKEVIMKESVAPTEHLRLYDKYDFLITRKAERDVDNFLAENHSYEKIIDEICKYQKLIEEIQYTSIKTIRLGMFEMHCEELIRALVKRADIICGKLLAKMFRDHQEVNTRLCDEFERIAEKALSTPPNTAELMEMKAYIQKVEVTDMIELEQRLVDSKNCLAFLIEYVNFSPADMRLNNSVFQWYGRMGEIFEEHRKIIKEKIEQYQEGLKLRCERFVEELESYAKQSEEFYSFGDLQDVQRYLKKAQILNGKLDLAADKIEQFNAEEEAFGWLPSVYPQRKKIQDGLNPYLRLYETAVEFSSNYRAWTEGPYHKV-NPDQVEADIGNYWRGLYKLEKTFHDSPYALAMTKKVRSKVEDFKQHIPLIQVICNPGLRPRHWEAMSAIVGYPLQPSDDSTVSSFLDMNLEPYIDRFEGISEAASKEYSLEKAMEKMITEWDAVEFVIHSYRETGTFILASVDEIQMLLDDHIIKTQTMRGSPFIKPYEKQMREWEGKLLLLQEILDEWLKVQATWLYLEPIFSSPDIMSQMPEEGRRFTAVDKTWRDIMRSVMQDKHVLTVVTIDRMLERLKKSNELLELILKGLNEYLEKKRLFFPRFFFLSNDELLEILSETKDPTRVQPHLKKCFEGIAKVEFTETLDITHMKSSEGEVVELIEIISTAKARGQVEKWLVELERVMINSIHKVTGDATFAYTKYERINWVRDWPGQTVLCVSQIFWTKEVQTAIPMGIKALEQYLKTCNRQIDDIVTLVRGKLSMQNRVTLGALVVLDVHARDVLSSLVKKNISDDSDFEWLSQLRYYWQENHLETKMINAGLRYGYEYLGNSPRLVITPLTDRCYRTLFGALHLHLGGAPEGPAGTGKTETTKDLAKAVAKQCVVFNCSDGLDYLALGKFFKGLLSCGAWACFDEFNRIDLEVLSVVAQQILTIQRGINAGADILMFEGTELKLDPTCAVFITMNPGYAGRSELPDNLKALFRTVAMMVPDYAMIAEIVLYSCGFVTARPLSVKIVATYRLCSEQLSSQHHYDYGMRAVKSVLTAAGNLKLKYPNENEEILLLRSIIDVNLPKFLSHDLPLFEGITSDLFPGVKLPKPDYNDLLAAIKDNCASMNLQMTAFFSEKILQVYEMMIVRHGFMIVGEPFGGKTSAYRVLAGALNDICEKGLMEENKVQITVLNPKSVTMGQLYGQFDSVSHEWSDGVLAVSFRAFASSVTPDRKWLIFDGPVDAVWIENMNTVLDDNKKLCLMSGEIIQMSPQMNLIFEPMDLEVASPATVSRCGMIYMEPHMLGWRPLMLSWVNLLPASVSVIQKEFIMGLFDRMVPVSVEFIRK-HTKELSPTSDTNLVRSLMNLIDCFMDDFADEVKLKERNDRETYSLLEGIFLFSLIWSVGASCTDDDRLKFNKILRELMESPISDRTRNTFKLQSGTEQTSSKALTVPFPEKGTIYDYQFVTEGIGKWEPWIKKLKEAPPIPKDVMFNEIIVPTLDTIRYSALMELLTTHQKPSIFVGPTGTGKSVYITNFLLNQLNKEIYKPLLINFSAQTTAAQTQNIVMSKLDKRRKGVFGPPLGKRMVVFVDDVNMPAREVYGAQPPIELLRQWLDHWNWYDLKDCSMIKLVDIQIMCAMGPPGGGRNPVTPRYMRHFNIITINEFSDKSMYTIFSRILTWHLEICYKFPDEFLDLTTQIVNGTMTLYKEAMKNLLPTPAKSHYLFNLRDFSRVIQGVCLSRPETTETTEVIKRLWVHEVLRVYYDRLLDNTDRSWLINYIQEILRNYMYEDFHELFQRLDFDNDGMVEADDLRSLMFCDFHDPKREDTNYREIADVDNLRMIVEIHLEEYNNISKKPMNLVLFRFAIEHISRISRILKQPRSHALLVGVGGSGRQSVTRLAAHMADYSVFQVEISKGYDTTEWHEDLKVILRKCAEGEMQGVFLFTDTQIKEESFLEDVSNLLNAGEIPNLFALDEKQEICDKMRQLDRQRDKTKQTDGSPIALFNMFIDHCRSQLHVVLAMSPIGDAFRNRLRKFPALVNCCTIDWFQSWPEDALQAVASRFLEEIEMSEEIRDGCIDMCKSFHTSTIDLSKSFFVELQRYNYVTPTSYLELISTFKLLLEKKRSEVMKMKKRYEVGLEKLDSASSQVATMQMELEALHPQLKVASKEVDEMMIMIEKESVEVAKTEKIVKADETIANEQAMASKAIKDECDADLAGALPILESALAALDTLTAQDITVVKSMKSPPAGVKLVMEAICILKGIKADKIPDPTGSGKKIEDFWGPAKRLLGDMRFLQSLHEYDKDNIPPAYMNIIRKNYIPNPDFVPEKIRNASTAAEGLCKWVIAMDSYDKVAKIVAPKKIKLAAAEGELKIAMDGLRKKQAALKEVQDKLARLQDTLELNKQKKADLENQVDLCSKKLERAEQLIGGLGGEKTRWSHTALELGQLYINLTGDILISSGVVAYLGAFTSTYRQNQTKEWTTLCKGRDIPCSDDCSLMGTLGEAVTIRTWNIAGLPSDSFSIDNGIIIMNARRWPLMIDPQSQANKWIKNMEKANSLYVIKLSEPDYVRTLENCIQFGTPVLLENVGEELDPILEPLLLKQTFKQGGSTCIRLGDSTIEYAPDFRFYITTKLRNPHYLPETSVKVTLLNFMITPEGMQDQLLGIVVAQERPDLEEEKQALILQGAENKRQLKEIEDKILEVLSSSEGNILEDETAIKILSSSKALANEISQKQEVAEETEKKIDTTRMGYRPIAIHSS 3211 The following BLAST results are available for this feature:
BLAST of TCONS_00015394 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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