TCONS_00015262 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015262
Unique NameTCONS_00015262
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1293

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015262 ID=TCONS_00015262|Name=TCONS_00015262|organism=Clytia hemisphaerica|type=transcript|length=1293bp
AAAGAAAATGTTGAATACGGTTTTAACATTGAGAACAGAATCCGTTTCGG
GTTTGTTTCGGGGAAACGAGATGGTGGAGAGTATCAAGTCGGAATGGGAC
TTGGTGACAATAGTAAAACTGGGTATGTAACAAGAAACGCTGCAGGAGCT
GCCACGAATCATGACTCGACTGTTCACTGGGTTCTCGGTCCAATTGAGCA
GCCAGTAATAAACCCGTTAAAAATCACCGAAACATGGCAAGATTCGCGCA
AATGCAGctttggacaaaaatatttcacataTTCATGTCTCATCCCgaat
aataataaattttatGCCGAATTGTGTCCCGGACAGAGCTACCAAGAACA
AATTTACAAAGAATGTCCTTTTGTTGGGCCAGTGAACCTGAAAACCATTG
ACCGCGGTGAAAACGAAGTCACTTTATCGTGGGACGTATTTGATAAATCT
CGTTTGTTGAGACGTCCGGACAAGTTTTGGGGATATCGAGTCATTGTGTA
TACCAACCAATCAGCGTGGACAGAAATTCAACGTCATGAATTACAAGATA
CTTTTATCAAGATCACTGGATTGAGCATTTTCACTCATTACAAGGTTGAG
CTGCAAGCGAAAGTTCTTGAACGAACAGTTTATGGCGATTCTACCGAACT
CATATTTCACACCAGAAATGACGTTCCTGTTGCTGCACCTACATTGAGTT
CAACCATGGTCGATCATCAGTGTGTTGAATTGCAATGGACATCCATCAAT
GAGAATGATCTGAAAGGCTATTTGATTGGTTATAAGATCACCACTTTGCG
CAATGGAACATTGATTGGAACAAGGGACGTGAACATCACAAACAATGAAA
CAATTTGTAACTTACTTTCATATACTGTCTACCATTTCACTGTCCAAGTA
ACCAATGAAGATCACTCGGGCCCAGCCTCCCTGGAAAGCTCTTCCATGAC
CGATCAGTCAACTCCGACAGCTCCACCTTTGGACGTTCAAGCAATCGCCA
ATAATCTGACAATCGATCACTTGGGAATcgccaatataaccatcaaatgG
GGTGATGTCCCTACTCTCGATCGTCAGGGAATCATCTTAGGTTACAAGAT
ATTCTGCTATGACCAAAACAAAGCTCTCGTTGACGAAAAGACATTCAACG
AGACTGGGGCGAATCACGTGATAATGTTTGAGAATCTGGTTTATTTTTCG
GATTACTGGATTGATATCTTGGCCTTCACCGGTCCTGGAGATGGATTCTC
CTATCCACAGATTAATTGGACGTCTGTTCGGACGGCAGGAAAT
Run BLAST on NCBI

protein sequence of TCONS_00015262-protein

>TCONS_00015262-protein ID=TCONS_00015262-protein|Name=TCONS_00015262-protein|organism=Clytia hemisphaerica|type=polypeptide|length=431bp
KENVEYGFNIENRIRFGFVSGKRDGGEYQVGMGLGDNSKTGYVTRNAAGA
ATNHDSTVHWVLGPIEQPVINPLKITETWQDSRKCSFGQKYFTYSCLIPN
NNKFYAELCPGQSYQEQIYKECPFVGPVNLKTIDRGENEVTLSWDVFDKS
RLLRRPDKFWGYRVIVYTNQSAWTEIQRHELQDTFIKITGLSIFTHYKVE
LQAKVLERTVYGDSTELIFHTRNDVPVAAPTLSSTMVDHQCVELQWTSIN
ENDLKGYLIGYKITTLRNGTLIGTRDVNITNNETICNLLSYTVYHFTVQV
TNEDHSGPASLESSSMTDQSTPTAPPLDVQAIANNLTIDHLGIANITIKW
GDVPTLDRQGIILGYKIFCYDQNKALVDEKTFNETGANHVIMFENLVYFS
DYWIDILAFTGPGDGFSYPQINWTSVRTAGN
Run BLAST on NCBI

transcript from alignment at sc0000208:152728..166527+

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015262 ID=TCONS_00015262|Name=TCONS_00015262|organism=Clytia hemisphaerica|type=transcript|length=13800bp|location=Sequence derived from alignment at sc0000208:152728..166527+ (Clytia hemisphaerica)
AAAGAAAATGTTGAATACGGTTTTAACATTGAGAACAGAATCCGTTTCGG
GTTTGTTTCGGGGAAACGAGATGGTGGAGAGTATCAAGTCGGAATGGGAC
TTGGTGACAATAGTAAAACTGGGTATGTAACAAGAAACGCTGCAGGAGCT
GCCACGAATCATGACTCGACTGTTCACTGGGTTCTCGGTATGTATTTTTT
GTAATGTTCTttattcgtgatattcatgacgtaatgttttctacggaaag
accccgatttttgccagtagtggcaaattttatacaacttttgtccagta
taaatttgccactactggcttaAACCGGGGTATTTCNCAAGCCATTACTG
CTATagatgctccgagcgtctctaagtcataaatttcacgttcttttttc
ttcatttacaaaaggagcatgcttttcacttgcgaattctgatttcgtct
attcagaaaactgtagcgaaatcgtaaaaactttttttttaaactagagg
gtgattcctttttggacctaccaccgggtaccccggtggaggtcctttaa
attaacccatgtccgttcgttcgttcgttcgttcgtccgttcgttcgtct
gttgccagcttttctcgggattggctNGAACGTTTACTTCcaaaatggcg
gaaattacgtaccTCAACAAAACACGAAAAACCTTTGTACCATATAATAT
TTTCCAAATTCtgcataaaatgaaaaaaaaaattatgtcaaaaaatgTCG
CTCACTACGATCGCTTAGCATCGCGATTTGTGTTCAATTCTTAATCTTGT
GAGCACAATAACACAACTGTCATACAGTCTACATTACTTTCTGGTCACCA
GCTTTATTTTTCAGACTTTATTTCTTCAGAATCTGTATGgttaaagttga
aaaaagacCTCTTagtgaaaattttgatattttactcTTCAATTTTCCAG
GTCCAATTGAGCAGCCAGTAATAAACCCGTTAAAAATCACCGAAACATGG
CAAGATTCGCGCAAATGCAGctttggacaaaaatatttcacataTTCATG
TCTCATCCCgaataataataaattttatGCCGAATTGTGTCCCGGACAGA
GCTACCAAGAACAAATTTACAAAGAATGTCCTTGTATGTGAAACAACTTA
TCATtgcctttatattttttcatttctttgtttttgaactACTATTTTGA
GCTTAATTGTAGTCAgtttgtatatgtaatcacatgataactagTGCAAT
TTGAGAATAGTTGCACGAGTGATTNGATCGCcggattccatgaatttctc
gagttgttctcgtacatgttttttttttataagcaagtgtatgccccttg
gtcaggctcgtgtatgcttaagttctcaaagcatccgggcatagtttatg
cttaNgtatatgtaatcacatgataactagTGCAATTTGAGAATagttgc
acgagtgatttttttggtcgtgttcagacctgaaagtttaagtttaaggt
tcaagtagtactttgttgatatgggaatttaattataatcacttttcttt
tgtcatcatcNAGCATCcgggcatagtttatgcttattatatgcttaaga
atcatgcttatgattcaccccgagccaattttttaatgaaattttgtaaa
agatttgttcagattttgggagcagtggaatgttagctagccgtggaatg
tcttattttttatatgacctctaccaaacctttttaaacagataaaaatg
accacttgaaaaatattttaggctgacatatatgctcatgttatgcttag
gaattctgcaaatctgagccttcatatgcttataagcgttatgcttataa
aaaaaaaaacatgtattattctgcattttcatactattgttctcattttt
caattgtcttattacatcattcttcaggtaggtccattcagcatgtagct
tgttaaactttggtttaactaatgaggagcgtgccgttagatacaaaagg
aatataaaagaaacatgtagacctaattgctttaaaccttggtctgaaca
cgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CATTATAAAACAAAAGACTGGACATAGCTGCTCACATGGgaattataatt
ttattttttctaattacTCATTAATTTTTACGACTTGTCGATTCTAGCAg
tgtttgaattttgaattttttcaattagATTGTATCAtatgtagctgatg
attgtaagcatgaaactttaagttctacattttaaaaaaagttttgactc
ATCATTATTATGTTTTAGCCCCTCTCAATTGGTCAAATCCAGAGATccag
atttttttcatcttaataTTCTAATTTTAGTTGTTGGGCCAGTGAACCTG
AAAACCATTGACCGCGGTGAAAACGAAGTCACTTTATCGTGGGACGTATT
TGATAAATCTCGTTTGTTGAGACGTCCGGACAAGTTTTGGGGATATCGAG
TCATTGTGTATACCAACCAATCAGCGTGGACAGAAATTCAACGTCATGAA
TTACAAGATACTTTTATCAAGATCACTGGTAAGTGAAGGGATTGGGGAGA
GTAAAATATGACTCAACTGATTGGTCGACAATAACTCTAAAGTTTAGTAT
TGACTTACTTTCACGATGATATAACAAACTTAGTCGGCTTCGTAATGTTA
ATTACCTTCTGAAGTTTTTTATTGCTAAAAATAGAAGTTTCTAACTTTAG
TAAAAAGAGGCCGCACCCCAGCGGtttttcgtgatggcgtgattggcgtt
ttttaaagtttgtgatttcgtgatttaagattttaaggtgcgtgattgcg
tgatcggagGAGTCAGCGTgatcaacgtgatcgtgatagaaatgaaattt
aacttgTGATAGCGTTTATCTGTCAAACACCTTAATTTTCAGGCTAAGTA
GAAAGCAAGGACAACTAACCGAAGCTGCATATATATCTGCTTTGCTTCTA
GAACAGAAAATCAAGCGGATATTGATTTTAGAAAGAAGCAAAGTTGATTT
CTTTGCGTCGTAAGTCGGACTAGCACCTGACTTGTCTGTAGAAAAAATGT
TCATTGTGTGTACAAAGGATAGAGAAGATTCatttatttctatttggtta
aGTTGCAGAAGGCTCTGACGCCTACTTTCACACTACTACAGACGCTTTCA
ATTAGcaccccgtcagcaccttggactgaccaCCCCATTCCCATCACGTG
ACATGGGTTGACCCAAGCAAAGGTTCGTTTATTTGTCAGGTGATCCGTTG
TGAGTAGGAATctaacctcagtcgcctgtgcagcaactaAGGTTAACGCC
GACTATTCTACAGGGCCTCGTCGTCTGTCGTCCGTCGGCGTGATTTATCT
ATCGGATACTTAACTTTGTTAATGTCTGCTTTTGTTGTACTAACTGTCgt
ttcttttctctttcaaGGATTGAGCATTTTCACTCATTACAAGGTTGAGC
TGCAAGCGAAAGTTCTTGAACGAACAGTTTATGGCGATTCTACCGAACTC
ATATTTCACACCAGAAATGACGGTAAGAAAATGTTCCTATGAACTTGATG
TGATGATGTCTTCCGACATGACATNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNgaacaatagaaatgactttgtt
taaacaatagatgtacgcttttgctaaaccccctctccccccttcactgt
gtacgtactatatggatggcccctccagtctggtctgggtaaataaattt
tgtagtttagtaccgccaagttacacaacatgcacacaaccatcttgaag
actttgctggtcgcaaatgataaacgaaagcaaaacttaaaattcataac
tatgcggggaagctcattttttcCCCGTTTTGttttaaactcgcttttga
ttggtctatgaatttgggcgattgatttaccgccttggcggaataaacac
acaacaataataaataaattcaacagggcagcggtgtagcaattaatttc
aactgggagtcctctcttctgtgccaagcactggcagtgttttttaNCTA
CAAGTCTGATAAAcatgataagagatatgtataaactgttatcgccattc
attccattccatcgttcagtcaaaatgtgcgccaaggttagaaaaggtta
gaaaaacacaatctgcgtccggaactgtgtgaaaaatagtttgatcattt
tcaacaagaactgtatatattaatattaatataaatgatcaaattccaaa
gaccatttgtgataattttgcaagtccaataataggagatgtgatgtcat
catttggttcccgtcatctgatttacggtcaacaggtagagctggagagt
ctgaaagcttttccgctgctttgctggatttccactgtcgacctctgcac
gctctgtgtttaaaagttttcaaatcgaagtagagagccgcatgcCNNNN
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gaccttttttcaaagaggccaccctgttgaataattatgtagtccagcag
aaaaacaatgataaaaccatgcataattattacaatatgcatgatacagt
aatttatgcatggctctatcattgtttttaaggctggactacataattat
tcaacaggacgtcctctttgaaaaaaggtctattccctttcaacaagatg
tatagctgcttcttaacagaaaaatattttcgactgaccggccgaacgac
tcccactttttaaagtagaaatgacgggaaccaaaNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNagtagaaatgacggga
accaaacagttttttgcgattcgcctttatcacaaacacgtccaagtcca
aaaaagcacgattgcatccagtctttatatcaaattcatacagtagctgt
acttttttaaactttatcaaattccaataacactataacaccatcaatcc
ccctagaggcaaacaagaaaaatatgtttttattgcaaaaactatataaa
aagtatcagaaaattcaacataaacaaaaacttgagcaaacggctttaaa
ccttcaaaggatgtagaaaaagaatccccttgatgaaaatcatgtgtttg
atttgctgagttaaaaaaataaatgacagaaattgaagcttgaagcttgc
aacagatttacactggaaatactttggtactgacttatcacatctgacta
tcgcttgagtcgccatcttgaaactacattatgatctgtaaaaacaacgc
gcgctaaaagtacccaaaaagttaacccgatcggaaggaagtttagaaat
caaagtgagatcggaaaatcggattttttttttgccgtcttatggtggAA
GANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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gtaacaatcacacaaaaatcatgatccaattcaactcattaaagcataaa
aaacaaagaaaaatagcgaaagagcggtagcaaccagttgtttattttgc
cgccatctttgttttgactgttaaaaggcagtatggtccgatcaacaata
cgcttccgaaccgagcgacgtttcccgatcgagaaaaggatacttatatt
ttccAGCGACGTTTCTGGAAGAAATGACGTATTCATCGTCGTATGaaaaa
catcctactgtttttcacgccggggctcgatttggaaaaaatccattacg
taatgcttccaacagacagtcgggtacAGGCGATAATTCTCCTTATTGGG
ACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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cacacgacgacgaaagtctgaatggaaacgaggctgaaaaagggtaaaaa
tcgattttatcactccgcatatcagcttttttttcccgcgtttttgccaa
aagagtcgcactccgctcgctaacgctcgctccgtgcgtaataaacccaa
caactgattggttgtaagtggtaacgttaaatcaatcaatactttacttt
caaccaatcagctgttgagtCCGTAGTGCATAATATCAGAAGACGTTGAA
GTGATATATGCccaatatataatttttatatcaaataaatgttttcgaat
tttttaaagtACAGGTTGTACttgatttaagaaaaaatgCTACCTTCTTC
TTGAGACCAAAATTTATCATCACTTTATGCGTTTCTTTTAGTTCCTGTTG
CTGCACCTACATTGAGTTCAACCATGGTCGATCATCAGTGTGTTGAATTG
CAATGGACATCCATCAATGAGAATGATCTGAAAGGCTATTTGATTGGTTA
TAAGATCACCACTTTGCGCAATGGAACATTGGTAATTCTAACTGATCTCT
AACTACTTATCTAGAACtccaagctggcacacaacgttgtttcaacgttc
atctaacgttatatggatgttatgaacgttagataaacgtcgaaaaaacg
ttgtgtgccagctgggctagTTACTCCATGGAAAAGACCTAAGTATAAag
ttctacaatcatggtcggaatgtattgaaattttagtgtatgttaacgtt
tttcagaattttaagttcgggtgagaattgttattttagaactttaactt
tctttcattgaacgTTTCGATTTCGGAtgggttcggtggcttctaggcta
tatttcaagccttattggagcaaatttgacgagcttttaaatcctgagat
cctaaggtcctaagtcttaagtctcgtGTTAAACTCAGAGTTAATACTCT
ACTTTCTAACTGTAGTTACCACGCTTAAagatcatttgtggtgtttaaaa
tttcagagGGGAACCCCCTTTGTCTccaatattttgtccatgattgtaga
tccATCTACTCTGCGCTAATAGAACATTAAAGGAGATCGATTGATGTATC
GCATAACTTTGCTTGAATCCTTAACTACTTTAAAgaaaactagccggtac
ccggcgtcgcacgccggtttagctgtttgctaacgcatttaaagtccttt
gagatgttaGGAAGGTGGCTtataaacacgatgaaatcaaaattaaaggg
aagaattttcttcaaagtttgactctatccctcccgggtgacgtatcttt
taaccatattttgaaaaagatttttgtggcaaaaatgatcagaaaacaga
aagggcgtcattcccaaattacaccataccggcgaccagcgacgtccgag
acggttctgcaattagatttttttctcgcttcgctcgcgttatatttgcc
gtagttcttgatgtttaggaaaactttgatgtcaacataagcggagtgaa
ataatagacatgacacgcgattcgtcgaaaaaaggcagcccgggggagag
gatacttaggcaagagaagggtatgggtatgggtatataccggccttaag
ggtgccttttttgaaacatggcagtttgaaaaatcgcaaaatcaaacttc
agtcccactaagaattggaaaaataggaaaatttcaactttttgatagat
agaaatttggtcaaattagttccaaaaagtgaattaaaattcacacaatt
tcccttgtttcttctcttccttattctgctaagggtccgaggggcagggc
cgaaagtcagctcgcaaccatagtcccccggAAGGCAGATAGGACAtaca
gacaaaaaagcgtgatagatagcgcaattttatgttgctttttaaagaat
aacttcgtcataacttcaataatttttcaaattcaacaatgacttagatt
tacagcaaaataattatcgacatacatgtttaaaggtccctttttacgNN
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tcttttgttttgaaaagaattcgaatgtctcaaatcaaataaggtcgtta
attacattcgaaaacataaaacaaaagaaaagaaagaaaaaataagaaaa
agtgtaatctatcaatcaaaacaaagtctttataaaacggcgcgaatctg
atttaaaacatttgtggagcaagaacaaaataaaagtcatcttttggaag
aacaaaaacattgcgtgcgaaaacgaaagtagcacagacagaaagaaaga
aagacgacaaaacgacatacagactaccactattaatatatagaaaaCAG
CTTCCTAGACCTGAATAAACGGACAcagacctgatttagcggccgaagac
ctgaattaaaaaCCGAAGACTTAAATTAAAAACCGAAGACTTGATGTAGC
GGTCGAATACCTTTTTTAACGACCGAAGACCTGGAGAAAATGAATTGTGG
AAATttgttataaatattttttataaattcaatCAAGAGGTTTCAATGGG
AAATAGTATTGGAAACCAATTaagttaaaagattttaaactaaaaagaat
gaaaattaatgCCAATAACTCGTTTCGAACTGCCCATCTTTCGTCTTTGA
CACTACTGCACTAACCACTGGACCATCGCAACTGATGCATTGCCGAGTGG
TTCAAGCTAGTTTAACTGGCCCTAACTTATCTATCAGGTATTCGGCCGGT
GACTTGCTTAATCAGGTCTTTGGCCGTTGATTTAGGTTTTCGGCCGTTAA
TTCAGGTATTCAGCCGCTAAATCAGCAGGTCTGCGtccgctgacggaaaa
aaaatttaccgcAGCGCGagcaaatattttgagatttacTTTTGTTAAGT
CTGCTTTGTTGGTTTGTTATATCATAGAAGAAATTATTATCTTTAACTTT
TACAACCCGAGAAtaaagtggagtctccataactcgaacacgcacgggga
atacAAATttcttcgagttaaggaaaattcaaaatatggAGTATGTttca
taaggcattgttaacggAAGGGACCAAAAACATATTTGAGTTTCGAGTCA
TAGAGGTGTAACCTAAAGAAATTTTACTGCATTTatgattcttttctttt
gtagATTGGAACAAGGGACGTGAACATCACAAACAATGAAACAATTTGTA
ACTTACTTTCATATACTGTCTACCATTTCACTGTCCAAGTAACCAATGAA
GATCACTCGGGCCCAGCCTCCCTGGAAAGCTCTTCCATGACCGATCAGTC
AAGTAAGTAGAAGAGGGTTGACTTGGCACTTGTTCGCCAGCACCTTAAAC
CAGGGTTTCGCGGCTCGAAGCCCCTCTCCTTCCNACACTTGTTCGCCAGC
ACCAGGGTTTCGCGGCTCAAATCCCCTCTCCTTCCCATGTTCCGCTCAGT
TCATAGCCGCGGACcctgtaaaaataatggaaagaTAGCCTAAAAgttct
agattactgggctattaACGTAAAAGTAATGACTTAGAGGGTTTTCCGAT
TGATTCTTGTAGTTCGTTGAGAATAATTTAAGAGGGTAGATAGTTCAAAA
CAACTGGATAGAGTGGATTTTCCCTAAcaatattttgaacattttttttt
ctaaataggAGATAATTTCAAATGGCAAAATCTGCTCTTTTAAAATAGGC
TCTGTTTATTTCTAACAGCTCCGACAGCTCCACCTTTGGACGTTCAAGCA
ATCGCCAATAATCTGACAATCGATCACTTGGGAATcgccaatataaccat
caaatgGGGTGATGTCCCTACTCTCGATCGTCAGGGAATCATCTTAGGTT
ACAAGATATTCTGCTATGACCAAAACAAAGCTCTCGTTGACGAAAAGACA
TTCAACGAGACTGGGGCGAATCACGTGATAATGTTTGAGAATCTGGTTTA
TTTTTCGGATTACTGGATTGATATCTTGGCCTTCACCGGTCCTGGAGATG
GATTCTCCTATCCACAGATTAATTGGACGTCTGTTCGGACGGCAGGAAAT

Coding sequence (CDS) from alignment at sc0000208:152728..166527+

>TCONS_00015262 ID=TCONS_00015262|Name=TCONS_00015262|organism=Clytia hemisphaerica|type=CDS|length=9051bp|location=Sequence derived from alignment at sc0000208:152728..166527+ (Clytia hemisphaerica)
AAAGAAAATGTTGAATACGGTTTTAACATTGAGAACAGAATCCGTTTCGG
GTTTGTTTCGGGGAAACGAGATGGTGGAGAGTATCAAGTCGGAATGGGAC
TTGGTGACAATAGTAAAACTGGGTATGTAACAAGAAACGCTGCAGGAGCT
GCCACGAATCATGACTCGACTGTTCACTGGGTTCTCGGTCCAATTGAGCA
GCCAGTAATAAACCCGTTAAAAATCACCGAAACATGGCAAGATTCGCGCA
AATGCAGctttggacaaaaatatttcacataTTCATGTCTCATCCCgaat
aataataaattttatGCCGAATTGTGTCCCGGACAGAGCTACCAAGAACA
AATTTACAAAGAATGTCCTTTTGTTGGGCCAGTGAACCTGAAAACCATTG
ACCGCGGTGAAAACGAAGTCACTTTATCGTGGGACGTATTTGATAAATCT
CGTTTGTTGAGACGTCCGGACAAGTTTTGGGGATATCGAGTCATTGTGTA
TACCAACCAATCAGCGTGGACAGAAATTCAACGTCATGAATTACAAGATA
CTTTTATCAAGATCACTGGATTGAGCATTTTCACTCATTACAAGGTTGAG
CTGCAAGCGAAAGTTCTTGAACGAACAGTTTATGGCGATTCTACCGAACT
CATATTTCACACCAGAAATGACGTTCCTGTTGCTGCACCTACATTGAGTT
CAACCATGGTCGATCATCAGTGTGTTGAATTGCAATGGACATCCATCAAT
GAGAATGATCTGAAAGGCTATTTGATTGGTTATAAGATCACCACTTTGCG
CAATGGAACATTGATTGGAACAAGGGACGTGAACATCACAAACAATGAAA
CAATTTGTAACTTACTTTCATATACTGTCTACCATTTCACTGTCCAAGTA
ACCAATGAAGATCACTCGGGCCCAGCCTCCCTGGAAAGCTCTTCCATGAC
CGATCAGTCAACTCCGACAGCTCCACCTTTGGACGTTCAAGCAATCGCCA
ATAATCTGACAATCGATCACTTGGGAATcgccaatataaccatcaaatgG
GGTGATGTCCCTACTCTCGATCGTCAGGGAATCATCTTAGGTTACAAGAT
ATTCTGCTATGACCAAAACAAAGCTCTCGTTGACGAAAAGACATTCAACG
AGACTGGGGCGAATCACGTGATAATGTTTGAGAATCTGGTTTATTTTTCG
GATTACTGGATTGATATCTTGGCCTTCACCGGTCCTGGAGATGGATTCTC
CTATCCACAGATTAATTGGACGTCTGTTCGGACGGCAGGAAATAAAGAAA
ATGTTGAATACGGTTTTAACATTGAGAACAGAATCCGTTTCGGGTTTGTT
TCGGGGAAACGAGATGGTGGAGAGTATCAAGTCGGAATGGGACTTGGTGA
CAATAGTAAAACTGGGTATGTAACAAGAAACGCTGCAGGAGCTGCCACGA
ATCATGACTCGACTGTTCACTGGGTTCTCGGTCCAATTGAGCAGCCAGTA
ATAAACCCGTTAAAAATCACCGAAACATGGCAAGATTCGCGCAAATGCAG
ctttggacaaaaatatttcacataTTCATGTCTCATCCCgaataataata
aattttatGCCGAATTGTGTCCCGGACAGAGCTACCAAGAACAAATTTAC
AAAGAATGTCCTTTTGTTGGGCCAGTGAACCTGAAAACCATTGACCGCGG
TGAAAACGAAGTCACTTTATCGTGGGACGTATTTGATAAATCTCGTTTGT
TGAGACGTCCGGACAAGTTTTGGGGATATCGAGTCATTGTGTATACCAAC
CAATCAGCGTGGACAGAAATTCAACGTCATGAATTACAAGATACTTTTAT
CAAGATCACTGGATTGAGCATTTTCACTCATTACAAGGTTGAGCTGCAAG
CGAAAGTTCTTGAACGAACAGTTTATGGCGATTCTACCGAACTCATATTT
CACACCAGAAATGACGTTCCTGTTGCTGCACCTACATTGAGTTCAACCAT
GGTCGATCATCAGTGTGTTGAATTGCAATGGACATCCATCAATGAGAATG
ATCTGAAAGGCTATTTGATTGGTTATAAGATCACCACTTTGCGCAATGGA
ACATTGATTGGAACAAGGGACGTGAACATCACAAACAATGAAACAATTTG
TAACTTACTTTCATATACTGTCTACCATTTCACTGTCCAAGTAACCAATG
AAGATCACTCGGGCCCAGCCTCCCTGGAAAGCTCTTCCATGACCGATCAG
TCAACTCCGACAGCTCCACCTTTGGACGTTCAAGCAATCGCCAATAATCT
GACAATCGATCACTTGGGAATcgccaatataaccatcaaatgGGGTGATG
TCCCTACTCTCGATCGTCAGGGAATCATCTTAGGTTACAAGATATTCTGC
TATGACCAAAACAAAGCTCTCGTTGACGAAAAGACATTCAACGAGACTGG
GGCGAATCACGTGATAATGTTTGAGAATCTGGTTTATTTTTCGGATTACT
GGATTGATATCTTGGCCTTCACCGGTCCTGGAGATGGATTCTCCTATCCA
CAGATTAATTGGACGTCTGTTCGGACGGCAGGAAATAAAGAAAATGTTGA
ATACGGTTTTAACATTGAGAACAGAATCCGTTTCGGGTTTGTTTCGGGGA
AACGAGATGGTGGAGAGTATCAAGTCGGAATGGGACTTGGTGACAATAGT
AAAACTGGGTATGTAACAAGAAACGCTGCAGGAGCTGCCACGAATCATGA
CTCGACTGTTCACTGGGTTCTCGGTCCAATTGAGCAGCCAGTAATAAACC
CGTTAAAAATCACCGAAACATGGCAAGATTCGCGCAAATGCAGctttgga
caaaaatatttcacataTTCATGTCTCATCCCgaataataataaatttta
tGCCGAATTGTGTCCCGGACAGAGCTACCAAGAACAAATTTACAAAGAAT
GTCCTTTTGTTGGGCCAGTGAACCTGAAAACCATTGACCGCGGTGAAAAC
GAAGTCACTTTATCGTGGGACGTATTTGATAAATCTCGTTTGTTGAGACG
TCCGGACAAGTTTTGGGGATATCGAGTCATTGTGTATACCAACCAATCAG
CGTGGACAGAAATTCAACGTCATGAATTACAAGATACTTTTATCAAGATC
ACTGGATTGAGCATTTTCACTCATTACAAGGTTGAGCTGCAAGCGAAAGT
TCTTGAACGAACAGTTTATGGCGATTCTACCGAACTCATATTTCACACCA
GAAATGACGTTCCTGTTGCTGCACCTACATTGAGTTCAACCATGGTCGAT
CATCAGTGTGTTGAATTGCAATGGACATCCATCAATGAGAATGATCTGAA
AGGCTATTTGATTGGTTATAAGATCACCACTTTGCGCAATGGAACATTGA
TTGGAACAAGGGACGTGAACATCACAAACAATGAAACAATTTGTAACTTA
CTTTCATATACTGTCTACCATTTCACTGTCCAAGTAACCAATGAAGATCA
CTCGGGCCCAGCCTCCCTGGAAAGCTCTTCCATGACCGATCAGTCAACTC
CGACAGCTCCACCTTTGGACGTTCAAGCAATCGCCAATAATCTGACAATC
GATCACTTGGGAATcgccaatataaccatcaaatgGGGTGATGTCCCTAC
TCTCGATCGTCAGGGAATCATCTTAGGTTACAAGATATTCTGCTATGACC
AAAACAAAGCTCTCGTTGACGAAAAGACATTCAACGAGACTGGGGCGAAT
CACGTGATAATGTTTGAGAATCTGGTTTATTTTTCGGATTACTGGATTGA
TATCTTGGCCTTCACCGGTCCTGGAGATGGATTCTCCTATCCACAGATTA
ATTGGACGTCTGTTCGGACGGCAGGAAATAAAGAAAATGTTGAATACGGT
TTTAACATTGAGAACAGAATCCGTTTCGGGTTTGTTTCGGGGAAACGAGA
TGGTGGAGAGTATCAAGTCGGAATGGGACTTGGTGACAATAGTAAAACTG
GGTATGTAACAAGAAACGCTGCAGGAGCTGCCACGAATCATGACTCGACT
GTTCACTGGGTTCTCGGTCCAATTGAGCAGCCAGTAATAAACCCGTTAAA
AATCACCGAAACATGGCAAGATTCGCGCAAATGCAGctttggacaaaaat
atttcacataTTCATGTCTCATCCCgaataataataaattttatGCCGAA
TTGTGTCCCGGACAGAGCTACCAAGAACAAATTTACAAAGAATGTCCTTT
TGTTGGGCCAGTGAACCTGAAAACCATTGACCGCGGTGAAAACGAAGTCA
CTTTATCGTGGGACGTATTTGATAAATCTCGTTTGTTGAGACGTCCGGAC
AAGTTTTGGGGATATCGAGTCATTGTGTATACCAACCAATCAGCGTGGAC
AGAAATTCAACGTCATGAATTACAAGATACTTTTATCAAGATCACTGGAT
TGAGCATTTTCACTCATTACAAGGTTGAGCTGCAAGCGAAAGTTCTTGAA
CGAACAGTTTATGGCGATTCTACCGAACTCATATTTCACACCAGAAATGA
CGTTCCTGTTGCTGCACCTACATTGAGTTCAACCATGGTCGATCATCAGT
GTGTTGAATTGCAATGGACATCCATCAATGAGAATGATCTGAAAGGCTAT
TTGATTGGTTATAAGATCACCACTTTGCGCAATGGAACATTGATTGGAAC
AAGGGACGTGAACATCACAAACAATGAAACAATTTGTAACTTACTTTCAT
ATACTGTCTACCATTTCACTGTCCAAGTAACCAATGAAGATCACTCGGGC
CCAGCCTCCCTGGAAAGCTCTTCCATGACCGATCAGTCAACTCCGACAGC
TCCACCTTTGGACGTTCAAGCAATCGCCAATAATCTGACAATCGATCACT
TGGGAATcgccaatataaccatcaaatgGGGTGATGTCCCTACTCTCGAT
CGTCAGGGAATCATCTTAGGTTACAAGATATTCTGCTATGACCAAAACAA
AGCTCTCGTTGACGAAAAGACATTCAACGAGACTGGGGCGAATCACGTGA
TAATGTTTGAGAATCTGGTTTATTTTTCGGATTACTGGATTGATATCTTG
GCCTTCACCGGTCCTGGAGATGGATTCTCCTATCCACAGATTAATTGGAC
GTCTGTTCGGACGGCAGGAAATAAAGAAAATGTTGAATACGGTTTTAACA
TTGAGAACAGAATCCGTTTCGGGTTTGTTTCGGGGAAACGAGATGGTGGA
GAGTATCAAGTCGGAATGGGACTTGGTGACAATAGTAAAACTGGGTATGT
AACAAGAAACGCTGCAGGAGCTGCCACGAATCATGACTCGACTGTTCACT
GGGTTCTCGGTCCAATTGAGCAGCCAGTAATAAACCCGTTAAAAATCACC
GAAACATGGCAAGATTCGCGCAAATGCAGctttggacaaaaatatttcac
ataTTCATGTCTCATCCCgaataataataaattttatGCCGAATTGTGTC
CCGGACAGAGCTACCAAGAACAAATTTACAAAGAATGTCCTTTTGTTGGG
CCAGTGAACCTGAAAACCATTGACCGCGGTGAAAACGAAGTCACTTTATC
GTGGGACGTATTTGATAAATCTCGTTTGTTGAGACGTCCGGACAAGTTTT
GGGGATATCGAGTCATTGTGTATACCAACCAATCAGCGTGGACAGAAATT
CAACGTCATGAATTACAAGATACTTTTATCAAGATCACTGGATTGAGCAT
TTTCACTCATTACAAGGTTGAGCTGCAAGCGAAAGTTCTTGAACGAACAG
TTTATGGCGATTCTACCGAACTCATATTTCACACCAGAAATGACGTTCCT
GTTGCTGCACCTACATTGAGTTCAACCATGGTCGATCATCAGTGTGTTGA
ATTGCAATGGACATCCATCAATGAGAATGATCTGAAAGGCTATTTGATTG
GTTATAAGATCACCACTTTGCGCAATGGAACATTGATTGGAACAAGGGAC
GTGAACATCACAAACAATGAAACAATTTGTAACTTACTTTCATATACTGT
CTACCATTTCACTGTCCAAGTAACCAATGAAGATCACTCGGGCCCAGCCT
CCCTGGAAAGCTCTTCCATGACCGATCAGTCAACTCCGACAGCTCCACCT
TTGGACGTTCAAGCAATCGCCAATAATCTGACAATCGATCACTTGGGAAT
cgccaatataaccatcaaatgGGGTGATGTCCCTACTCTCGATCGTCAGG
GAATCATCTTAGGTTACAAGATATTCTGCTATGACCAAAACAAAGCTCTC
GTTGACGAAAAGACATTCAACGAGACTGGGGCGAATCACGTGATAATGTT
TGAGAATCTGGTTTATTTTTCGGATTACTGGATTGATATCTTGGCCTTCA
CCGGTCCTGGAGATGGATTCTCCTATCCACAGATTAATTGGACGTCTGTT
CGGACGGCAGGAAATAAAGAAAATGTTGAATACGGTTTTAACATTGAGAA
CAGAATCCGTTTCGGGTTTGTTTCGGGGAAACGAGATGGTGGAGAGTATC
AAGTCGGAATGGGACTTGGTGACAATAGTAAAACTGGGTATGTAACAAGA
AACGCTGCAGGAGCTGCCACGAATCATGACTCGACTGTTCACTGGGTTCT
CGGTCCAATTGAGCAGCCAGTAATAAACCCGTTAAAAATCACCGAAACAT
GGCAAGATTCGCGCAAATGCAGctttggacaaaaatatttcacataTTCA
TGTCTCATCCCgaataataataaattttatGCCGAATTGTGTCCCGGACA
GAGCTACCAAGAACAAATTTACAAAGAATGTCCTTTTGTTGGGCCAGTGA
ACCTGAAAACCATTGACCGCGGTGAAAACGAAGTCACTTTATCGTGGGAC
GTATTTGATAAATCTCGTTTGTTGAGACGTCCGGACAAGTTTTGGGGATA
TCGAGTCATTGTGTATACCAACCAATCAGCGTGGACAGAAATTCAACGTC
ATGAATTACAAGATACTTTTATCAAGATCACTGGATTGAGCATTTTCACT
CATTACAAGGTTGAGCTGCAAGCGAAAGTTCTTGAACGAACAGTTTATGG
CGATTCTACCGAACTCATATTTCACACCAGAAATGACGTTCCTGTTGCTG
CACCTACATTGAGTTCAACCATGGTCGATCATCAGTGTGTTGAATTGCAA
TGGACATCCATCAATGAGAATGATCTGAAAGGCTATTTGATTGGTTATAA
GATCACCACTTTGCGCAATGGAACATTGATTGGAACAAGGGACGTGAACA
TCACAAACAATGAAACAATTTGTAACTTACTTTCATATACTGTCTACCAT
TTCACTGTCCAAGTAACCAATGAAGATCACTCGGGCCCAGCCTCCCTGGA
AAGCTCTTCCATGACCGATCAGTCAACTCCGACAGCTCCACCTTTGGACG
TTCAAGCAATCGCCAATAATCTGACAATCGATCACTTGGGAATcgccaat
ataaccatcaaatgGGGTGATGTCCCTACTCTCGATCGTCAGGGAATCAT
CTTAGGTTACAAGATATTCTGCTATGACCAAAACAAAGCTCTCGTTGACG
AAAAGACATTCAACGAGACTGGGGCGAATCACGTGATAATGTTTGAGAAT
CTGGTTTATTTTTCGGATTACTGGATTGATATCTTGGCCTTCACCGGTCC
TGGAGATGGATTCTCCTATCCACAGATTAATTGGACGTCTGTTCGGACGG
CAGGAAATAAAGAAAATGTTGAATACGGTTTTAACATTGAGAACAGAATC
CGTTTCGGGTTTGTTTCGGGGAAACGAGATGGTGGAGAGTATCAAGTCGG
AATGGGACTTGGTGACAATAGTAAAACTGGGTATGTAACAAGAAACGCTG
CAGGAGCTGCCACGAATCATGACTCGACTGTTCACTGGGTTCTCGGTCCA
ATTGAGCAGCCAGTAATAAACCCGTTAAAAATCACCGAAACATGGCAAGA
TTCGCGCAAATGCAGctttggacaaaaatatttcacataTTCATGTCTCA
TCCCgaataataataaattttatGCCGAATTGTGTCCCGGACAGAGCTAC
CAAGAACAAATTTACAAAGAATGTCCTTTTGTTGGGCCAGTGAACCTGAA
AACCATTGACCGCGGTGAAAACGAAGTCACTTTATCGTGGGACGTATTTG
ATAAATCTCGTTTGTTGAGACGTCCGGACAAGTTTTGGGGATATCGAGTC
ATTGTGTATACCAACCAATCAGCGTGGACAGAAATTCAACGTCATGAATT
ACAAGATACTTTTATCAAGATCACTGGATTGAGCATTTTCACTCATTACA
AGGTTGAGCTGCAAGCGAAAGTTCTTGAACGAACAGTTTATGGCGATTCT
ACCGAACTCATATTTCACACCAGAAATGACGTTCCTGTTGCTGCACCTAC
ATTGAGTTCAACCATGGTCGATCATCAGTGTGTTGAATTGCAATGGACAT
CCATCAATGAGAATGATCTGAAAGGCTATTTGATTGGTTATAAGATCACC
ACTTTGCGCAATGGAACATTGATTGGAACAAGGGACGTGAACATCACAAA
CAATGAAACAATTTGTAACTTACTTTCATATACTGTCTACCATTTCACTG
TCCAAGTAACCAATGAAGATCACTCGGGCCCAGCCTCCCTGGAAAGCTCT
TCCATGACCGATCAGTCAACTCCGACAGCTCCACCTTTGGACGTTCAAGC
AATCGCCAATAATCTGACAATCGATCACTTGGGAATcgccaatataacca
tcaaatgGGGTGATGTCCCTACTCTCGATCGTCAGGGAATCATCTTAGGT
TACAAGATATTCTGCTATGACCAAAACAAAGCTCTCGTTGACGAAAAGAC
ATTCAACGAGACTGGGGCGAATCACGTGATAATGTTTGAGAATCTGGTTT
ATTTTTCGGATTACTGGATTGATATCTTGGCCTTCACCGGTCCTGGAGAT
GGATTCTCCTATCCACAGATTAATTGGACGTCTGTTCGGACGGCAGGAAA
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008537XLOC_008537Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015262-exon-sc0000208-1491911889:152728..152914TCONS_00015262-exon-sc0000208-1491911889:152728..152914Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1510915933:152728..152914TCONS_00015262-exon-sc0000208-1510915933:152728..152914Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1575043694:152728..152914TCONS_00015262-exon-sc0000208-1575043694:152728..152914Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1491911889:153678..153860TCONS_00015262-exon-sc0000208-1491911889:153678..153860Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1510915933:153678..153860TCONS_00015262-exon-sc0000208-1510915933:153678..153860Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1575043694:153678..153860TCONS_00015262-exon-sc0000208-1575043694:153678..153860Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1491911889:155208..155405TCONS_00015262-exon-sc0000208-1491911889:155208..155405Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1510915933:155208..155405TCONS_00015262-exon-sc0000208-1510915933:155208..155405Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1575043694:155208..155405TCONS_00015262-exon-sc0000208-1575043694:155208..155405Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1491911889:156295..156399TCONS_00015262-exon-sc0000208-1491911889:156295..156399Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1510915933:156295..156399TCONS_00015262-exon-sc0000208-1510915933:156295..156399Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1575043694:156295..156399TCONS_00015262-exon-sc0000208-1575043694:156295..156399Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1491911889:162119..162258TCONS_00015262-exon-sc0000208-1491911889:162119..162258Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1510915933:162119..162258TCONS_00015262-exon-sc0000208-1510915933:162119..162258Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1575043694:162119..162258TCONS_00015262-exon-sc0000208-1575043694:162119..162258Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1491911889:165632..165779TCONS_00015262-exon-sc0000208-1491911889:165632..165779Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1510915933:165632..165779TCONS_00015262-exon-sc0000208-1510915933:165632..165779Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1575043694:165632..165779TCONS_00015262-exon-sc0000208-1575043694:165632..165779Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1491911889:166196..166527TCONS_00015262-exon-sc0000208-1491911889:166196..166527Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1510915933:166196..166527TCONS_00015262-exon-sc0000208-1510915933:166196..166527Clytia hemisphaericaexon
TCONS_00015262-exon-sc0000208-1575043694:166196..166527TCONS_00015262-exon-sc0000208-1575043694:166196..166527Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015262-proteinTCONS_00015262-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000208supercontigsc0000208:152728..166527 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.130914	0.0319155	0.0370569	0	0.794453	0.697542	0.462855	0.393926	0.661913	0.683239	0.596851	0.741099	0.348268	0.429494	0.241597	0.558428	0.933629	1.10804	0.417494	0.546097	3.03781	2.91717	0.82557	1.29643	4.56809	7.08756	0.403896	0.143683	0.254283	0.185053
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003961FN3_dom
IPR013783Ig-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015262 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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