TCONS_00015248 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015248
Unique NameTCONS_00015248
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length288

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015248 ID=TCONS_00015248|Name=TCONS_00015248|organism=Clytia hemisphaerica|type=transcript|length=288bp
caaaaatccacttttgcCGATATCTTGATGTTCTTAAAAAGAATTTCTAA
GCTTGTTGGAAAAAGTATCGTAAATACATCAATGATTTCACGCAAAGACG
AATAACAGACTCTTGCTGATTAGAGTTTCCTTTATTAGGATCTTTCATTC
AGATGCCGTCAAGTTGAACCCCTCATAAATTCCTTTCCATCTCAGTTAAC
ACactgttgtttcaacgttcatctaacgttatatgaacgttgaaacaacg
ttgtgtgccagctgggatggaTAAGTAGGCCCGATTAG
Run BLAST on NCBI

transcript from alignment at sc0000205:398368..398655

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015248 ID=TCONS_00015248|Name=TCONS_00015248|organism=Clytia hemisphaerica|type=transcript|length=288bp|location=Sequence derived from alignment at sc0000205:398368..398655 (Clytia hemisphaerica)
CTAATCGGGCCTACTTAtccatcccagctggcacacaacgttgtttcaac
gttcatataacgttagatgaacgttgaaacaacagtGTGTTAACTGAGAT
GGAAAGGAATTTATGAGGGGTTCAACTTGACGGCATCTGAATGAAAGATC
CTAATAAAGGAAACTCTAATCAGCAAGAGTCTGTTATTCGTCTTTGCGTG
AAATCATTGATGTATTTACGATACTTTTTCCAACAAGCTTAGAAATTCTT
TTTAAGAACATCAAGATATCGgcaaaagtggatttttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008528XLOC_008528Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015248-exon-sc0000205-1491911889:398368..398655TCONS_00015248-exon-sc0000205-1491911889:398368..398655Clytia hemisphaericaexon
TCONS_00015248-exon-sc0000205-1510915933:398368..398655TCONS_00015248-exon-sc0000205-1510915933:398368..398655Clytia hemisphaericaexon
TCONS_00015248-exon-sc0000205-1575043694:398368..398655TCONS_00015248-exon-sc0000205-1575043694:398368..398655Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000205supercontigsc0000205:398368..398655 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.435768	3.54178	2.00425	1.73483	0.981494	2.94314	2.7154	0.176478	0	0	0.550294	0.298074	0	0	0	0.431661	0	0	0	1.73431	1.40303	0	0.93164	0.479784	0.860547	0.778113	0.75947	0	0.506505
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015248 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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