TCONS_00015193 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015193
Unique NameTCONS_00015193
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2960

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015193 ID=TCONS_00015193|Name=TCONS_00015193|organism=Clytia hemisphaerica|type=transcript|length=2960bp
caattttgacgactttttattttggttgccatagtaaccaatgacgtcag
tttccatggcaacgggtggtcacacccggccccacctctcaaattttgat
cttctacattcaaggaacattattcaatcataaaatccctttgcacaagc
tgctgcacacgggaagctttttcgcgacatagtggcccctactaTTAATT
CTTTTTGCTTACAGGGGAAAATATCATATTCTGTTATAAAAGTAAATGCT
AAATGCAAGTATTTTTCAAAGAGATTAAGCTTTTCTGTTAAGGAATTTAT
AATGGCTACCAAGGTAGACCCAGAAGAAGCTATTGTACCAATAAACTCTG
AAATCCATCGCAATAATTATCACCATACAGTTCAAAATGACAACTGTAGT
AATCAGACAAACAATGGTAAAGTGGCTGAAGGTTTATCAAACAAAGGTTT
TAGCTTGAATGCGGAAACAGAGAAACAAGGATCGCTGCAGGATGAAAGTT
TAAAAGATGGTTGTAACAGTAACGATGCGGATTATGATAACTGTGATAAT
CAGCTCCAAGGAGATATTATATTTTGTCCAACAAATGCTGAATTAGATAA
ACATAACTTGGTTGATAAAAGCGATGTTCCGAATCACAAACCATCTGAAC
AAAACACAATCAAAAATAATAGTAAGACTACCCAACAAAAAGAGCGCAAA
TCTTCAAATGATGTTATCACTGACCAAGTTGACGAAAAGAAACCATTGCT
ACAACCACCAACTTGCTCAGAAAATACAGGAGAAAGATTACCTACATGTA
GACTTATTATCACTTCAATGAAGCACGTTCTGTGGATTGGCCTTTCAGCT
CTACCAACTATAATTATTGTTTGTATGGCAGGTTTTGGTTATTCTCATTT
AAAATGGAcaagaaaaattctaaataatggAACTACAACAGACGATGGTG
GTATTAACTATTATTTTAACCGTTGGACTGTATTCtggtttgatgacgtc
atgagaACATTCCTGATTACTCTATTGAATGTTATCGTGGCATGTGTATT
ATACAATCTAAGCATGCGTCAAACATTATACCTTATTGCAAGTGTGGCAC
TACCTATCACTTTGACTGGctcattttgtttttattgtatgttGGAATGG
TATACTTCAGATCCTTATGCTGTGTGGTTTTACTATATAGACATTGTCAT
TTTCATGATGGCGTTCTNTTAACCGTTGGACTGTATTCtggtttgatgac
gtcatgagaACATTCCTGATTACTCTATTGAATGTTATCGTTGCATGTGT
ATTATACAACCTAAGTATGCGTAAAACATTATACCTTATTGTAAGTGTGG
CACTACCTATCACTTTGACTGGctcgttttgtttttattgtatgttGCAA
TGGTATACTTCAGATCCTTATGCTGTGTGGTTTTACTACATAGACATTGT
CATTTTCATGATGGCGTTCTTCCTGGTTGTACCATTGGCTCAATTACTAG
CAGCAAAACAAGTGGGCGCAAAACTTTTAGAGGCGACCAAGCTCTACATT
TTACCAATGTTTTTGATGGCCCTTGGGATAGCATTTGTGGATATTTATTT
CTCAAAGAGTTATCGTGTTGAGGAAGATGGATCACTTTTGAAATACAGTC
AACGACTTATTGTGTATCCAGTTCTAATGGACAGCTTTTTGAGTCTTGGT
GAATTCTTTGTCAGGAGATTGGAAGGTACAACCGTTCGTGGTGAAGCTCA
TTCATTGTATCTTATTCAAGTTCGCTTCGGAATCCTTGGAAGATACATGA
ATCTGACTGCAGggaATTTAACCATGCTGACCATAACATGTAGCCTGGTC
ATGCTCAAAGATGTTGTATTGCACAGAATGGGTCGAATACAATGTTGGAT
GTTCTATAAAATCCGTCGGTTTTTTAAACGTGAGCAAAGTTCAACTGAAG
AATTTCGTGCATGGTATTTTGAGGAACGTTTCTGTAATTTTCGTGCTTGT
GTTTTGAACAATGACTTGTTACATGAGTTCACAGCCACCATTGTGACGCC
CATTCTCTTAGTTTTCTTCCGCCCTCACCGCCTCTTATTCCGCTTTGATG
ACGATCTCTTCATCAACACTAAATCGGGATTATTCGAACCGGGATTATTC
TACGCCCAGTTTTTCATCCAAATCGGATTTCTATTCATCACATACGTTTT
TATAGTATTTATTGAAGGACGTTTTAATGGAGTGCATCTCCGCTATGCTT
TCGCTCAACGCAATCTGCTTCAAGAAATATCCCAGATTGTTATTTATTTG
TGGGGCATGTTGCAGATTTTATCGGCTGTTCGCGTCATACCGAACTACTT
TCAGTGCGACACATCGAACATTTGTAGCTGTCATTTCAATATCAATAAAA
CTGAGTATGGATGTTGATTGTGAGTGCTTACGTAATCATCATACTTTAAT
GAGGCGAAATTTTGCGAGGattattaaatttcgcgatttatcTTGCTTGC
TTTAAATTTTAAGATTCTGCGGGAATCTGGGGAATTAAATGCGCAGATGG
TACTATTGGGTGTCAAGATTTTATAACTACAATTTTATTAAGGAAACCTT
ACAGTGTGAACGCGCCCTATACCTCCACGATTGACGGAAGAGCTGATGGA
AGAGCACGAATAAGAggaaaatcctgaaatattcttgaTGTGTATTCTAA
GTTTAGGATCCAACCCAACCTAAATCTagcatgtaatacatacctcACGC
GAAGATATGACATTTATTTTGTGAAGGCTTTTAGCATTGCTCGAGGATAA
TTNAAAATGTGCTTTATTTTGTGAAGGCTTTTAGCATTGCTCGaggataa
ttggcaatttaaaggtaaaatgctctaaaaattggattttttttattcag
ttgccaaattccatgatagtgttattcttagcatattcttaattttttgg
ccaatgtcat
Run BLAST on NCBI

protein sequence of TCONS_00015193-protein

>TCONS_00015193-protein ID=TCONS_00015193-protein|Name=TCONS_00015193-protein|organism=Clytia hemisphaerica|type=polypeptide|length=387bp
MRTFLITLLNVIVACVLYNLSMRKTLYLIVSVALPITLTGSFCFYCMLQW
YTSDPYAVWFYYIDIVIFMMAFFLVVPLAQLLAAKQVGAKLLEATKLYIL
PMFLMALGIAFVDIYFSKSYRVEEDGSLLKYSQRLIVYPVLMDSFLSLGE
FFVRRLEGTTVRGEAHSLYLIQVRFGILGRYMNLTAGNLTMLTITCSLVM
LKDVVLHRMGRIQCWMFYKIRRFFKREQSSTEEFRAWYFEERFCNFRACV
LNNDLLHEFTATIVTPILLVFFRPHRLLFRFDDDLFINTKSGLFEPGLFY
AQFFIQIGFLFITYVFIVFIEGRFNGVHLRYAFAQRNLLQEISQIVIYLW
GMLQILSAVRVIPNYFQCDTSNICSCHFNINKTEYGC
Run BLAST on NCBI

transcript from alignment at sc0000205:250442..257010+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015193 ID=TCONS_00015193|Name=TCONS_00015193|organism=Clytia hemisphaerica|type=transcript|length=6569bp|location=Sequence derived from alignment at sc0000205:250442..257010+ (Clytia hemisphaerica)
caattttgacgactttttattttggttgccatagtaaccaatgacgtcag
tttccatggcaacgggtggtcacacccggccccacctctcaaattttgat
cttctacattcaaggaacattattcaatcataaaatccctttgcacaagc
tgctgcacacgggaagctttttcgcgacatagtggcccctactaTTAATT
CTTTTTGCTTACAGGGGAAAATATCATATTCTGTTATAAAAGTAAATGCT
AAATGCAAGTATTTTTCAAAGAGATTAAGCTTTTCTGTTAAGGAATTTAT
AATGGCTACCAAGGTAGACCCAGAAGAAGCTATTGTACCAATAAACTCTG
AAATCCATCGCAATAATTATCACCATACAGTTCAAAATGACAACTGTAGT
AATCAGACAAACAATGGTAAAGTGGCTGAAGGTTTATCAAACAAAGGTTT
TAGCTTGAATGCGGAAACAGAGAAACAAGGATCGCTGCAGGATGAAAGTT
TAAAAGATGGTTGTAACAGTAACGATGCGGATTATGATAACTGTGATAAT
CAGCTCCAAGGAGATATTATATTTTGTCCAACAAATGCTGAATTAGATAA
ACATAACTTGGTTGATAAAAGCGATGTTCCGAATCACAAACCATCTGAAC
AAAACACAATCAAAAATAATAGTAAGACTACCCAACAAAAAGAGCGCAAA
TCTTCAAATGATGTTATCACTGACCAAGTTGACGAAAAGAAACCATTGCT
ACAACCACCAACTTGCTCAGAAAATACAGGAGAAAGATTACCTACATGTA
GACTTATTATCACTTCAATGAAGCACGTTCTGTGGATTGGCCTTTCAGCT
CTACCAACTATAATTATTGTTTGTATGGCAGGTTTTGGTTATTCTCATTT
AAAATGGAcaagaaaaattctaaataatggAACTACAACAGACGATGGTG
GTATTAACTATTATTTTAACCGTTGGACTGTATTCtggtttgatgacgtc
atgagaACAGTAAGATTTAAATTGATTATTATGCATGAAAGATCTTATAT
CAGCTCCTACATGAAGTAATTTGAATTTTGACATCAaatgaatattttga
atatctttcaaaatattttatcaatccTTTATTATAATCAATCAAATTAA
ATTCATCTACTTAGTTTTCATTATCTtcatatttctatttctatttcgaT
TTCAGTTCCTGATTACTCTATTGAATGTTATCGTGGCATGTGTATTATAC
AATCTAAGCATGCGTCAAACATTATACCTTATTGCAAGTGTGGCACTACC
TATCACTTTGACTGGctcattttgtttttattgtatgttGGAATGGTATA
CTTCAGATCCTTATGCTGTGTGGTTTTACTATATAGACATTGTCATTTTC
ATGATGGCGTTCTNTTAACCGTTGGACTGTATTCtggtttgatgacgtca
tgagaACAGTAAGATTTAAATTGATTATTATGCATGAAAGATCTTATATC
AGCTCCTACATGAAGTAATTTGAATTTTGACATCAAATGaatattttgtg
tttaaattttttcaaatatctttcaaaatattttatcaatctTTTATTAT
AATCAATCAAATTAAATTCATCTACTTAGTTTTCATTATCttaatatttc
tatttctatttcgaTTTCAGTTCCTGATTACTCTATTGAATGTTATCGTT
GCATGTGTATTATACAACCTAAGTATGCGTAAAACATTATACCTTATTGT
AAGTGTGGCACTACCTATCACTTTGACTGGctcgttttgtttttattgta
tgttGCAATGGTATACTTCAGATCCTTATGCTGTGTGGTTTTACTACATA
GACATTGTCATTTTCATGATGGCGTTCTTCCTGGTTGTACCATTGGCTCA
ATTACTAGCAGCAAAACAAGTGGGCGCAAAACTTTTAGAGGTAAGGTAGG
AAATTACAATGGTTATACTGAAGGTACTCAAAATTAATGACGTGGAGATC
GCTTCTTTTGTTATAATCCCTTTTATGGGAATGATTGCTCTTAGTTTTCG
AAATCTTAATATTTCTGGGTTATATACCAGAACAATTTTTGAGTACCTTC
TGTACCGCCATTGAGTTTTATATCAGTTAAGCCAGCTTATTTTTTAATTC
GCAACTAATCGATAATcactttatttattattttacttCTTCTTAGCCAC
TTATATTACAACAGTTGAAGTCGTCTATAAAAGCCTCTGTAATGAAAGTT
CCTTTTGCTTGAAAAACTCAAGTTTCGAATCAAATGAAAAgtaaatttct
aaattatttGGTGCAATCTCTTTTAAGCTCATCCATCGACATGTGAGTAA
TCTCAAAATCATACCGACTTCGTATCACGTGACTATGTAATAGGCTGAGA
AGACTATGACTATGTTATAGACTGAGAAGCTCCAAACGAACAAAAATAGA
TTCATGATACTTTCTTGGTATAATTTTGATAGTGTTgcaatttttccttc
tttagGGCAAAAACTTGTTCAATTAAAATACAAATACACAAATACAGGCA
CATTGCTATTACGAGGAATGTTCTGGCAAATAACCCACTAAGCTAATTAT
GTCTGAAAACCAGAAAATTCCATAAGAAGAAATCTTACtaaaaattatat
caataaaAATAGAATTCAATTATCAAAACAATTCTCACTTGGAAATTTGT
TTATATTCTAATCTATAATTTCCTGTATACATTTTCAGGCGACCAAGCTC
TACATTTTACCAATGTTTTTGATGGCCCTTGGGATAGCATTTGTGGATAT
TTATTTCTCAAAGAGTTATCGTGTTGAGGAAGATGGATCACTTTTGAAAT
ACAGTCAACGACTTATTGTGTATCCAGTTCTAATGGACAGCTTTTTGAGT
AAGCCAACCTCTTACTTTCTTGAAAATCAGAAACTTTATATCTTTATCTT
CTTTGGAATGAATTTATCGTTCAGTAGAATTCGGTATATTTTAGGAAATG
TGTTGTCTGAACATAGTCAGAACCTAATAATGGAGGGTTATGCTTCAGTC
AAAATATAGACTATTGGCGAACAGATTTGGTTGGAATTTGTCAACAAAAT
GGCAATATAAATTGGTACTTAAGGGCCTACACTTATGAGATAGAACAGGG
AGGGTGCGATATAAATTTTGGGTTGAGACCTTCCTGTACACTTTGACGAG
ATTTATTATCAATTTAAAATGGATTTTTTGAATACTTATCAAATACTTCT
ACCGCAGGTCTTGGTGAATTCTTTGTCAGGAGATTGGAAGGTACAACCGT
TCGTGGTGAAGCTCATTCATTGTATCTTATTCAAGTTCGCTTCGGAATCC
TTGGAAGATACATGAATCTGACTGCAGGTATTCCTCATGAAAATATTATT
CATTTTTTAGTTATTTGTGAAATGGCTTATTTCTAAACAGCtcattccaa
attttgaaatttgctttATGCTTATCGCACTAAATGACTGGCGGTGTACT
CTGAGGAAAAAAAAAGTTCATTGCAAGTATCTGTTGATAAAGAATTAAAG
GCAAATGTCTGAAattaaaaatctattgttcttttttgcgATGGAATAAA
GAATaatcagtatataaaataatcAATAATGTATCACTTATTTATTTTGG
CCCTATCGCAAATATAAGAATAGAGGTCTGACTTGTGTCtggatttgttt
tttttgtgctaATCAAATCCGcgacgaattttttttcatccatCGCTTTA
ATTAATATCGGCGAATAGCAAATATCCTTaaaacatttatttattttagc
ggGGACTTATTATGGAGATTTGacgattattttttattttttgtgagaac
taatttttttctaattattttcattttagggaATTTAACCATGCTGACCA
TAACATGTAGCCTGGTCATGCTCAAAGATGTTGTATTGCACAGAATGGGT
CGAATACAATGTTGGATGTTCTATAAAATCCGTCGGTTTTTTAAACGTGA
GCAAAGTTCAACTGAAGAATTTCGTGCATGGTATTTTGAGGAACGTTTCT
GTAATTTTCGTGCTTGTGTTTTGAACAATGACTTGTTACATGAGTTCACA
GGTAGGGATAATTAtaatactcttaggtgccaaataaacgggccccccgc
ttgttaatttttcgatttttttccaccccccccggacgttattaggaccc
ccccggaccttatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNcccccccccccgtttattcgaacc
cccccctcCGGACACAATATGTCTTTCACaaaatctttccttttttgCTA
TTAGACTATAGCAATGGCAGATGCTTTTATTCGTTTTAGTTTACTTATAC
TACTCGCCTTTTTTGTACCAAGGGAGTTAAtgtttttaaacctttttcat
TTCAGCCACCATTGTGACGCCCATTCTCTTAGTTTTCTTCCGCCCTCACC
GCCTCTTATTCCGCTTTGATGACGATCTCTTCATCAACACTAAATCGGGA
TTATTCGAACCGGGATTATTCTACGCCCAGTTTTTCATCCAAATCGGATT
TCTATTCATCACATACGTTTTTATAGTATTTATTGAAGGACGTTTTAATG
GAGTGCATCTCCGCTATGCTTTCGCTCAACGCAATCTGCTTCAAGAAATA
TCCCAGATTGTTATTTATTTGTGGGGCATGTTGCAGATTTTATCGGCTGT
TCGCGTCATACCGAACTACTTTCAGTGCGACACATCGAACATTTGTAGCT
GTCATTTCAATATCAATAAAACTGAGTATGGATGTTGATTGTGAGTGCTT
ACGTAATCATCATACTTTAATGAGGCGAAATTTTGCGAGGattattaaat
ttcgcgatttatcTTGCTTGCTTTAAATTTTAAGATTCTGCGGGAATCTG
GGGAATTAAATGCGCAGATGGTACTATTGGGTGTCAAGATTTTATAACTA
CAATTTTATTAAGGAAACCTTACAGTGTGAACGCGCCCTATACCTCCACG
ATTGACGGAAGAGCTGATGGAAGAGCACGAATAAGAGTAATCCcatccca
gctgacacacaacgttgtttaaacgtttatctaacgttcacaacgtccac
ataacgttagattaacgttgaaacaacgttgtgtaccagctggtaCACTT
AcgactttttcttttattcttcttttcaCTCGTCAATAGTTTTCCttttt
tgttcttcttttaagattttgattCCAATCTGACAAATGGAGTGAAAGCA
TATGCTTTTATACTATTTTGAAAGGTCGAAAAAAGgtcaaaacaaataat
tttaaaataaacaaaatatttacttATATTTTTGTTGTTTACCCGTACCA
GGTTAAAAACGTCATAGAATATTGGTTTTGGCTTTGAGCTGATGGTTCTC
AGAAAACCTCTTAATTTTGTGCCTAACTGCacgctgtttttttcatttca
taatggatattcttaactttttagggaaaatcctgaaatattcttgaTGT
GTATTCTAAGTTTAGGATCCAACCCAACCTAAATCTagcatgtaatacat
acctcACGCGAAGATATGACATTTATTTTGTGAAGGCTTTTAGCATTGCT
CGAGGATAATTNAAAATGTGCTTTATTTTGTGAAGGCTTTTAGCATTGCT
CGaggataattggcaatttaaaggtaaaatgctctaaaaattggattttt
tttattcagttgccaaattccatgatagtgttattcttagcatattctta
attttttggccaatgtcat

Coding sequence (CDS) from alignment at sc0000205:250442..257010+

>TCONS_00015193 ID=TCONS_00015193|Name=TCONS_00015193|organism=Clytia hemisphaerica|type=CDS|length=6984bp|location=Sequence derived from alignment at sc0000205:250442..257010+ (Clytia hemisphaerica)
atgagaACATTCCTGATTACTCTATTGAATGTTATCGTTGCATGTGTATT
ATACAACCTAAGTATGCGTAAAACATTATACCTTATTGTAAGTGTGGCAC
TACCTATCACTTTGACTGGctcgttttgtttttattgtatgttGCAATGG
TATACTTCAGATCCTTATGCTGTGTGGTTTTACTACATAGACATTGTCAT
TTTCATGATGGCGTTCTTCCTGGTTGTACCATTGGCTCAATTACTAGCAG
CAAAACAAGTGGGCGCAAAACTTTTAGAGGCGACCAAGCTCTACATTTTA
CCAATGTTTTTGATGGCCCTTGGGATAGCATTTGTGGATATTTATTTCTC
AAAGAGTTATCGTGTTGAGGAAGATGGATCACTTTTGAAATACAGTCAAC
GACTTATTGTGTATCCAGTTCTAATGGACAGCTTTTTGAGTCTTGGTGAA
TTCTTTGTCAGGAGATTGGAAGGTACAACCGTTCGTGGTGAAGCTCATTC
ATTGTATCTTATTCAAGTTCGCTTCGGAATCCTTGGAAGATACATGAATC
TGACTGCAGggaATTTAACCATGCTGACCATAACATGTAGCCTGGTCATG
CTCAAAGATGTTGTATTGCACAGAATGGGTCGAATACAATGTTGGATGTT
CTATAAAATCCGTCGGTTTTTTAAACGTGAGCAAAGTTCAACTGAAGAAT
TTCGTGCATGGTATTTTGAGGAACGTTTCTGTAATTTTCGTGCTTGTGTT
TTGAACAATGACTTGTTACATGAGTTCACAGCCACCATTGTGACGCCCAT
TCTCTTAGTTTTCTTCCGCCCTCACCGCCTCTTATTCCGCTTTGATGACG
ATCTCTTCATCAACACTAAATCGGGATTATTCGAACCGGGATTATTCTAC
GCCCAGTTTTTCATCCAAATCGGATTTCTATTCATCACATACGTTTTTAT
AGTATTTATTGAAGGACGTTTTAATGGAGTGCATCTCCGCTATGCTTTCG
CTCAACGCAATCTGCTTCAAGAAATATCCCAGATTGTTATTTATTTGTGG
GGCATGTTGCAGATTTTATCGGCTGTTCGCGTCATACCGAACTACTTTCA
GTGCGACACATCGAACATTTGTAGCTGTCATTTCAATATCAATAAAACTG
AGTATGGATGTTGAatgagaACATTCCTGATTACTCTATTGAATGTTATC
GTTGCATGTGTATTATACAACCTAAGTATGCGTAAAACATTATACCTTAT
TGTAAGTGTGGCACTACCTATCACTTTGACTGGctcgttttgtttttatt
gtatgttGCAATGGTATACTTCAGATCCTTATGCTGTGTGGTTTTACTAC
ATAGACATTGTCATTTTCATGATGGCGTTCTTCCTGGTTGTACCATTGGC
TCAATTACTAGCAGCAAAACAAGTGGGCGCAAAACTTTTAGAGGCGACCA
AGCTCTACATTTTACCAATGTTTTTGATGGCCCTTGGGATAGCATTTGTG
GATATTTATTTCTCAAAGAGTTATCGTGTTGAGGAAGATGGATCACTTTT
GAAATACAGTCAACGACTTATTGTGTATCCAGTTCTAATGGACAGCTTTT
TGAGTCTTGGTGAATTCTTTGTCAGGAGATTGGAAGGTACAACCGTTCGT
GGTGAAGCTCATTCATTGTATCTTATTCAAGTTCGCTTCGGAATCCTTGG
AAGATACATGAATCTGACTGCAGggaATTTAACCATGCTGACCATAACAT
GTAGCCTGGTCATGCTCAAAGATGTTGTATTGCACAGAATGGGTCGAATA
CAATGTTGGATGTTCTATAAAATCCGTCGGTTTTTTAAACGTGAGCAAAG
TTCAACTGAAGAATTTCGTGCATGGTATTTTGAGGAACGTTTCTGTAATT
TTCGTGCTTGTGTTTTGAACAATGACTTGTTACATGAGTTCACAGCCACC
ATTGTGACGCCCATTCTCTTAGTTTTCTTCCGCCCTCACCGCCTCTTATT
CCGCTTTGATGACGATCTCTTCATCAACACTAAATCGGGATTATTCGAAC
CGGGATTATTCTACGCCCAGTTTTTCATCCAAATCGGATTTCTATTCATC
ACATACGTTTTTATAGTATTTATTGAAGGACGTTTTAATGGAGTGCATCT
CCGCTATGCTTTCGCTCAACGCAATCTGCTTCAAGAAATATCCCAGATTG
TTATTTATTTGTGGGGCATGTTGCAGATTTTATCGGCTGTTCGCGTCATA
CCGAACTACTTTCAGTGCGACACATCGAACATTTGTAGCTGTCATTTCAA
TATCAATAAAACTGAGTATGGATGTTGAatgagaACATTCCTGATTACTC
TATTGAATGTTATCGTTGCATGTGTATTATACAACCTAAGTATGCGTAAA
ACATTATACCTTATTGTAAGTGTGGCACTACCTATCACTTTGACTGGctc
gttttgtttttattgtatgttGCAATGGTATACTTCAGATCCTTATGCTG
TGTGGTTTTACTACATAGACATTGTCATTTTCATGATGGCGTTCTTCCTG
GTTGTACCATTGGCTCAATTACTAGCAGCAAAACAAGTGGGCGCAAAACT
TTTAGAGGCGACCAAGCTCTACATTTTACCAATGTTTTTGATGGCCCTTG
GGATAGCATTTGTGGATATTTATTTCTCAAAGAGTTATCGTGTTGAGGAA
GATGGATCACTTTTGAAATACAGTCAACGACTTATTGTGTATCCAGTTCT
AATGGACAGCTTTTTGAGTCTTGGTGAATTCTTTGTCAGGAGATTGGAAG
GTACAACCGTTCGTGGTGAAGCTCATTCATTGTATCTTATTCAAGTTCGC
TTCGGAATCCTTGGAAGATACATGAATCTGACTGCAGggaATTTAACCAT
GCTGACCATAACATGTAGCCTGGTCATGCTCAAAGATGTTGTATTGCACA
GAATGGGTCGAATACAATGTTGGATGTTCTATAAAATCCGTCGGTTTTTT
AAACGTGAGCAAAGTTCAACTGAAGAATTTCGTGCATGGTATTTTGAGGA
ACGTTTCTGTAATTTTCGTGCTTGTGTTTTGAACAATGACTTGTTACATG
AGTTCACAGCCACCATTGTGACGCCCATTCTCTTAGTTTTCTTCCGCCCT
CACCGCCTCTTATTCCGCTTTGATGACGATCTCTTCATCAACACTAAATC
GGGATTATTCGAACCGGGATTATTCTACGCCCAGTTTTTCATCCAAATCG
GATTTCTATTCATCACATACGTTTTTATAGTATTTATTGAAGGACGTTTT
AATGGAGTGCATCTCCGCTATGCTTTCGCTCAACGCAATCTGCTTCAAGA
AATATCCCAGATTGTTATTTATTTGTGGGGCATGTTGCAGATTTTATCGG
CTGTTCGCGTCATACCGAACTACTTTCAGTGCGACACATCGAACATTTGT
AGCTGTCATTTCAATATCAATAAAACTGAGTATGGATGTTGAatgagaAC
ATTCCTGATTACTCTATTGAATGTTATCGTTGCATGTGTATTATACAACC
TAAGTATGCGTAAAACATTATACCTTATTGTAAGTGTGGCACTACCTATC
ACTTTGACTGGctcgttttgtttttattgtatgttGCAATGGTATACTTC
AGATCCTTATGCTGTGTGGTTTTACTACATAGACATTGTCATTTTCATGA
TGGCGTTCTTCCTGGTTGTACCATTGGCTCAATTACTAGCAGCAAAACAA
GTGGGCGCAAAACTTTTAGAGGCGACCAAGCTCTACATTTTACCAATGTT
TTTGATGGCCCTTGGGATAGCATTTGTGGATATTTATTTCTCAAAGAGTT
ATCGTGTTGAGGAAGATGGATCACTTTTGAAATACAGTCAACGACTTATT
GTGTATCCAGTTCTAATGGACAGCTTTTTGAGTCTTGGTGAATTCTTTGT
CAGGAGATTGGAAGGTACAACCGTTCGTGGTGAAGCTCATTCATTGTATC
TTATTCAAGTTCGCTTCGGAATCCTTGGAAGATACATGAATCTGACTGCA
GggaATTTAACCATGCTGACCATAACATGTAGCCTGGTCATGCTCAAAGA
TGTTGTATTGCACAGAATGGGTCGAATACAATGTTGGATGTTCTATAAAA
TCCGTCGGTTTTTTAAACGTGAGCAAAGTTCAACTGAAGAATTTCGTGCA
TGGTATTTTGAGGAACGTTTCTGTAATTTTCGTGCTTGTGTTTTGAACAA
TGACTTGTTACATGAGTTCACAGCCACCATTGTGACGCCCATTCTCTTAG
TTTTCTTCCGCCCTCACCGCCTCTTATTCCGCTTTGATGACGATCTCTTC
ATCAACACTAAATCGGGATTATTCGAACCGGGATTATTCTACGCCCAGTT
TTTCATCCAAATCGGATTTCTATTCATCACATACGTTTTTATAGTATTTA
TTGAAGGACGTTTTAATGGAGTGCATCTCCGCTATGCTTTCGCTCAACGC
AATCTGCTTCAAGAAATATCCCAGATTGTTATTTATTTGTGGGGCATGTT
GCAGATTTTATCGGCTGTTCGCGTCATACCGAACTACTTTCAGTGCGACA
CATCGAACATTTGTAGCTGTCATTTCAATATCAATAAAACTGAGTATGGA
TGTTGAatgagaACATTCCTGATTACTCTATTGAATGTTATCGTTGCATG
TGTATTATACAACCTAAGTATGCGTAAAACATTATACCTTATTGTAAGTG
TGGCACTACCTATCACTTTGACTGGctcgttttgtttttattgtatgttG
CAATGGTATACTTCAGATCCTTATGCTGTGTGGTTTTACTACATAGACAT
TGTCATTTTCATGATGGCGTTCTTCCTGGTTGTACCATTGGCTCAATTAC
TAGCAGCAAAACAAGTGGGCGCAAAACTTTTAGAGGCGACCAAGCTCTAC
ATTTTACCAATGTTTTTGATGGCCCTTGGGATAGCATTTGTGGATATTTA
TTTCTCAAAGAGTTATCGTGTTGAGGAAGATGGATCACTTTTGAAATACA
GTCAACGACTTATTGTGTATCCAGTTCTAATGGACAGCTTTTTGAGTCTT
GGTGAATTCTTTGTCAGGAGATTGGAAGGTACAACCGTTCGTGGTGAAGC
TCATTCATTGTATCTTATTCAAGTTCGCTTCGGAATCCTTGGAAGATACA
TGAATCTGACTGCAGggaATTTAACCATGCTGACCATAACATGTAGCCTG
GTCATGCTCAAAGATGTTGTATTGCACAGAATGGGTCGAATACAATGTTG
GATGTTCTATAAAATCCGTCGGTTTTTTAAACGTGAGCAAAGTTCAACTG
AAGAATTTCGTGCATGGTATTTTGAGGAACGTTTCTGTAATTTTCGTGCT
TGTGTTTTGAACAATGACTTGTTACATGAGTTCACAGCCACCATTGTGAC
GCCCATTCTCTTAGTTTTCTTCCGCCCTCACCGCCTCTTATTCCGCTTTG
ATGACGATCTCTTCATCAACACTAAATCGGGATTATTCGAACCGGGATTA
TTCTACGCCCAGTTTTTCATCCAAATCGGATTTCTATTCATCACATACGT
TTTTATAGTATTTATTGAAGGACGTTTTAATGGAGTGCATCTCCGCTATG
CTTTCGCTCAACGCAATCTGCTTCAAGAAATATCCCAGATTGTTATTTAT
TTGTGGGGCATGTTGCAGATTTTATCGGCTGTTCGCGTCATACCGAACTA
CTTTCAGTGCGACACATCGAACATTTGTAGCTGTCATTTCAATATCAATA
AAACTGAGTATGGATGTTGAatgagaACATTCCTGATTACTCTATTGAAT
GTTATCGTTGCATGTGTATTATACAACCTAAGTATGCGTAAAACATTATA
CCTTATTGTAAGTGTGGCACTACCTATCACTTTGACTGGctcgttttgtt
tttattgtatgttGCAATGGTATACTTCAGATCCTTATGCTGTGTGGTTT
TACTACATAGACATTGTCATTTTCATGATGGCGTTCTTCCTGGTTGTACC
ATTGGCTCAATTACTAGCAGCAAAACAAGTGGGCGCAAAACTTTTAGAGG
CGACCAAGCTCTACATTTTACCAATGTTTTTGATGGCCCTTGGGATAGCA
TTTGTGGATATTTATTTCTCAAAGAGTTATCGTGTTGAGGAAGATGGATC
ACTTTTGAAATACAGTCAACGACTTATTGTGTATCCAGTTCTAATGGACA
GCTTTTTGAGTCTTGGTGAATTCTTTGTCAGGAGATTGGAAGGTACAACC
GTTCGTGGTGAAGCTCATTCATTGTATCTTATTCAAGTTCGCTTCGGAAT
CCTTGGAAGATACATGAATCTGACTGCAGggaATTTAACCATGCTGACCA
TAACATGTAGCCTGGTCATGCTCAAAGATGTTGTATTGCACAGAATGGGT
CGAATACAATGTTGGATGTTCTATAAAATCCGTCGGTTTTTTAAACGTGA
GCAAAGTTCAACTGAAGAATTTCGTGCATGGTATTTTGAGGAACGTTTCT
GTAATTTTCGTGCTTGTGTTTTGAACAATGACTTGTTACATGAGTTCACA
GCCACCATTGTGACGCCCATTCTCTTAGTTTTCTTCCGCCCTCACCGCCT
CTTATTCCGCTTTGATGACGATCTCTTCATCAACACTAAATCGGGATTAT
TCGAACCGGGATTATTCTACGCCCAGTTTTTCATCCAAATCGGATTTCTA
TTCATCACATACGTTTTTATAGTATTTATTGAAGGACGTTTTAATGGAGT
GCATCTCCGCTATGCTTTCGCTCAACGCAATCTGCTTCAAGAAATATCCC
AGATTGTTATTTATTTGTGGGGCATGTTGCAGATTTTATCGGCTGTTCGC
GTCATACCGAACTACTTTCAGTGCGACACATCGAACATTTGTAGCTGTCA
TTTCAATATCAATAAAACTGAGTATGGATGTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008505XLOC_008505Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015193-proteinTCONS_00015193-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015193-exon-sc0000205-1491911889:250442..251450TCONS_00015193-exon-sc0000205-1491911889:250442..251450Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1510915933:250442..251450TCONS_00015193-exon-sc0000205-1510915933:250442..251450Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1575043694:250442..251450TCONS_00015193-exon-sc0000205-1575043694:250442..251450Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1491911889:251647..251899TCONS_00015193-exon-sc0000205-1491911889:251647..251899Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1510915933:251647..251899TCONS_00015193-exon-sc0000205-1510915933:251647..251899Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1575043694:251647..251899TCONS_00015193-exon-sc0000205-1575043694:251647..251899Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1491911889:252112..252381TCONS_00015193-exon-sc0000205-1491911889:252112..252381Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1510915933:252112..252381TCONS_00015193-exon-sc0000205-1510915933:252112..252381Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1575043694:252112..252381TCONS_00015193-exon-sc0000205-1575043694:252112..252381Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1491911889:253180..253339TCONS_00015193-exon-sc0000205-1491911889:253180..253339Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1510915933:253180..253339TCONS_00015193-exon-sc0000205-1510915933:253180..253339Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1575043694:253180..253339TCONS_00015193-exon-sc0000205-1575043694:253180..253339Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1491911889:253699..253818TCONS_00015193-exon-sc0000205-1491911889:253699..253818Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1510915933:253699..253818TCONS_00015193-exon-sc0000205-1510915933:253699..253818Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1575043694:253699..253818TCONS_00015193-exon-sc0000205-1575043694:253699..253818Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1491911889:254321..254542TCONS_00015193-exon-sc0000205-1491911889:254321..254542Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1510915933:254321..254542TCONS_00015193-exon-sc0000205-1510915933:254321..254542Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1575043694:254321..254542TCONS_00015193-exon-sc0000205-1575043694:254321..254542Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1491911889:255647..256277TCONS_00015193-exon-sc0000205-1491911889:255647..256277Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1510915933:255647..256277TCONS_00015193-exon-sc0000205-1510915933:255647..256277Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1575043694:255647..256277TCONS_00015193-exon-sc0000205-1575043694:255647..256277Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1491911889:256716..257010TCONS_00015193-exon-sc0000205-1491911889:256716..257010Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1510915933:256716..257010TCONS_00015193-exon-sc0000205-1510915933:256716..257010Clytia hemisphaericaexon
TCONS_00015193-exon-sc0000205-1575043694:256716..257010TCONS_00015193-exon-sc0000205-1575043694:256716..257010Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000205supercontigsc0000205:250442..257010 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.34459	1.47242	4.22108	5.3482	0.590467	0.590088	0.282358	0.0418955	0.627012	0.225347	0.219815	0.291644	0.664371	0.247156	0.538273	1.23096	0.172919	0.568038	0	0	0	0.0285761	0.721849	1.2897	1.08594	1.25312	0	0	0.404002	0.401611
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015193 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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