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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015088 ID=TCONS_00015088|Name=TCONS_00015088|organism=Clytia hemisphaerica|type=transcript|length=1190bp
GTTTTAAAAGGCAACAAATTTTCCATGATGGTACATTTTTTTAGAGTTAA
ATCTCAAATAGACAATATCAAATGAAGAGATAAAGATTCGATTTGTATTA
GATTTATTAGTGTTTAAGGTTGATAGTCTTTATGGAAAGGTATGGCAAAA
GCTAATAGATTCAATGATAAAAGCCAGTTTGGAGAATCTGGAAATGACGC
TTTTAAACGATTTACATTGGATGATCAAACTGGACAGAATGAACACCTTG
ACCAATTTAATACGGTATTAAATACAAATGACAGAGTTGATTACAAAATC
CAAAATGCAGGACTTCAATGGacaatcgaaaaattgaaaggtGAACATAA
AATGCAAAACTTAAAATCTGAAGTTGCTCTTTTAAAAGTGCAAAACGAAT
TAAAGGACTTGAAAATTGAACATACGACTTTGCAGGATGAAAGATTAAAA
GTAGTAAATGAAAATACTGCTTTGAAAGAGAGATTGAGCCATCTTGaaga
aaagatgttgaaaattgaaaaagaaaatgtcacaTTGGTTGAGAAATTGA
ACAAAACTCAAATTGGTGATGATAAATTATCATCATGTGCTACTCCACCA
AAAAATAATGTGAAGCAAGAGTCGCAACAGAGGAAGGTTTGGTTTTTCGA
CCGTAGATTCGACTCAGAAGAGGAAAACGAGCCAGTGAGAGATGatccat
taaaaagaaaaagtggGGAAGAAGAGTCTTCCAATAGGTTTATGAAATTA
ATTCATTTGGCCAATACAGGGTCCGGTTTCacattagaaattttcaaatg
tccAGGCTATGCTTCTTGGTATGCTGAAATGTTAGAAGAACTCAGATGTG
GAGTTGATGTGTCATTATTCAGCTGTATCATGAACACTagcaaaaacatt
ttgattATTAAGATTTTAAATACATGGTCTTTTCCATACAAAAAGCCAGT
TATTGACATTCGACATTATGTAGGTCTTTATGATGGTCATGGCAGTGCGG
ATGAGTGGCGAGCGGAAAATTTGAAACTGAAACGACTGTTACATCCTCAT
GATAACACTCTACATAATGATTTAGTTCAAATCGACGAGTATAGATGGAA
GGCGCCATTTATTGTCAACGAAAAAcgatttttagtatttttcatgaaat
attaaaatgagtaaaatgagaattctgtaaaaaaaacgCC Run BLAST on NCBI protein sequence of TCONS_00015088-protein >TCONS_00015088-protein ID=TCONS_00015088-protein|Name=TCONS_00015088-protein|organism=Clytia hemisphaerica|type=polypeptide|length=337bp
MAKANRFNDKSQFGESGNDAFKRFTLDDQTGQNEHLDQFNTVLNTNDRVD
YKIQNAGLQWTIEKLKGEHKMQNLKSEVALLKVQNELKDLKIEHTTLQDE
RLKVVNENTALKERLSHLEEKMLKIEKENVTLVEKLNKTQIGDDKLSSCA
TPPKNNVKQESQQRKVWFFDRRFDSEEENEPVRDDPLKRKSGEEESSNRF
MKLIHLANTGSGFTLEIFKCPGYASWYAEMLEELRCGVDVSLFSCIMNTS
KNILIIKILNTWSFPYKKPVIDIRHYVGLYDGHGSADEWRAENLKLKRLL
HPHDNTLHNDLVQIDEYRWKAPFIVNEKRFLVFFMKY Run BLAST on NCBI transcript from alignment at sc0000203:296757..297946 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015088 ID=TCONS_00015088|Name=TCONS_00015088|organism=Clytia hemisphaerica|type=transcript|length=1190bp|location=Sequence derived from alignment at sc0000203:296757..297946 (Clytia hemisphaerica)
GGcgttttttttacagaattctcattttactcattttaatatttcatgaa
aaatactaaaaatcgTTTTTCGTTGACAATAAATGGCGCCTTCCATCTAT
ACTCGTCGATTTGAACTAAATCATTATGTAGAGTGTTATCATGAGGATGT
AACAGTCGTTTCAGTTTCAAATTTTCCGCTCGCCACTCATCCGCACTGCC
ATGACCATCATAAAGACCTACATAATGTCGAATGTCAATAACTGGCTTTT
TGTATGGAAAAGACCATGTATTTAAAATCTTAATaatcaaaatgtttttg
ctAGTGTTCATGATACAGCTGAATAATGACACATCAACTCCACATCTGAG
TTCTTCTAACATTTCAGCATACCAAGAAGCATAGCCTggacatttgaaaa
tttctaatgtGAAACCGGACCCTGTATTGGCCAAATGAATTAATTTCATA
AACCTATTGGAAGACTCTTCTTCCccactttttctttttaatggatCATC
TCTCACTGGCTCGTTTTCCTCTTCTGAGTCGAATCTACGGTCGAAAAACC
AAACCTTCCTCTGTTGCGACTCTTGCTTCACATTATTTTTTGGTGGAGTA
GCACATGATGATAATTTATCATCACCAATTTGAGTTTTGTTCAATTTCTC
AACCAAtgtgacattttctttttcaattttcaacatcttttcttCAAGAT
GGCTCAATCTCTCTTTCAAAGCAGTATTTTCATTTACTACTTTTAATCTT
TCATCCTGCAAAGTCGTATGTTCAATTTTCAAGTCCTTTAATTCGTTTTG
CACTTTTAAAAGAGCAACTTCAGATTTTAAGTTTTGCATTTTATGTTCac
ctttcaatttttcgattgtCCATTGAAGTCCTGCATTTTGGATTTTGTAA
TCAACTCTGTCATTTGTATTTAATACCGTATTAAATTGGTCAAGGTGTTC
ATTCTGTCCAGTTTGATCATCCAATGTAAATCGTTTAAAAGCGTCATTTC
CAGATTCTCCAAACTGGCTTTTATCATTGAATCTATTAGCTTTTGCCATA
CCTTTCCATAAAGACTATCAACCTTAAACACTAATAAATCTAATACAAAT
CGAATCTTTATCTCTTCATTTGATATTGTCTATTTGAGATTTAACTCTAA
AAAAATGTACCATCATGGAAAATTTGTTGCCTTTTAAAAC Coding sequence (CDS) from alignment at sc0000203:296757..297946 >TCONS_00015088 ID=TCONS_00015088|Name=TCONS_00015088|organism=Clytia hemisphaerica|type=CDS|length=1014bp|location=Sequence derived from alignment at sc0000203:296757..297946 (Clytia hemisphaerica)
ttaatatttcatgaaaaatactaaaaatcgTTTTTCGTTGACAATAAATG
GCGCCTTCCATCTATACTCGTCGATTTGAACTAAATCATTATGTAGAGTG
TTATCATGAGGATGTAACAGTCGTTTCAGTTTCAAATTTTCCGCTCGCCA
CTCATCCGCACTGCCATGACCATCATAAAGACCTACATAATGTCGAATGT
CAATAACTGGCTTTTTGTATGGAAAAGACCATGTATTTAAAATCTTAATa
atcaaaatgtttttgctAGTGTTCATGATACAGCTGAATAATGACACATC
AACTCCACATCTGAGTTCTTCTAACATTTCAGCATACCAAGAAGCATAGC
CTggacatttgaaaatttctaatgtGAAACCGGACCCTGTATTGGCCAAA
TGAATTAATTTCATAAACCTATTGGAAGACTCTTCTTCCccactttttct
ttttaatggatCATCTCTCACTGGCTCGTTTTCCTCTTCTGAGTCGAATC
TACGGTCGAAAAACCAAACCTTCCTCTGTTGCGACTCTTGCTTCACATTA
TTTTTTGGTGGAGTAGCACATGATGATAATTTATCATCACCAATTTGAGT
TTTGTTCAATTTCTCAACCAAtgtgacattttctttttcaattttcaaca
tcttttcttCAAGATGGCTCAATCTCTCTTTCAAAGCAGTATTTTCATTT
ACTACTTTTAATCTTTCATCCTGCAAAGTCGTATGTTCAATTTTCAAGTC
CTTTAATTCGTTTTGCACTTTTAAAAGAGCAACTTCAGATTTTAAGTTTT
GCATTTTATGTTCacctttcaatttttcgattgtCCATTGAAGTCCTGCA
TTTTGGATTTTGTAATCAACTCTGTCATTTGTATTTAATACCGTATTAAA
TTGGTCAAGGTGTTCATTCTGTCCAGTTTGATCATCCAATGTAAATCGTT
TAAAAGCGTCATTTCCAGATTCTCCAAACTGGCTTTTATCATTGAATCTA
TTAGCTTTTGCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015088-exon-sc0000203-1491911889:296757..297946 | TCONS_00015088-exon-sc0000203-1491911889:296757..297946 | Clytia hemisphaerica | exon |
| TCONS_00015088-exon-sc0000203-1510915933:296757..297946 | TCONS_00015088-exon-sc0000203-1510915933:296757..297946 | Clytia hemisphaerica | exon |
| TCONS_00015088-exon-sc0000203-1575043694:296757..297946 | TCONS_00015088-exon-sc0000203-1575043694:296757..297946 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000203 | supercontig | sc0000203:296757..297946 . |
Blast
The following BLAST results are available for this feature:
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