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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014921 ID=TCONS_00014921|Name=TCONS_00014921|organism=Clytia hemisphaerica|type=transcript|length=1580bp
TTAAGATAGGGAAGATAGAGAAGAAACTCTCctcctttttttcaaaaaaa
tattgaaaaaattaaaaatattcaaagaatAAAACTTATTTAAAATAGTA
TAGAGCCAATAAGATGGCGAGGAACTAGCTTTTTTTTATCTTGTCTACAA
CATTTTTCTTCTCCCCATAAATTTCCTTACTATACATTTTGTTCTATTTC
TTTAccatttttctcttattttagCTGTAGCTAAAACAATGATTAaggca
aagaaaaataagagaCAGGTGAATTCTCTAGGGAGAGAGAATTGAAATAA
AAGGGAGAAAATTCTATCTTCAATCCGTAAAGAATCCACAAGTAATTCTA
ATCAATAGCTTCTTAAAACATGGATCATTAAAGGATTCAACACTACGTTA
AATTGGCAGAATTgacgaaaaaaatgatgaaaaacctTCCATCAGACAAA
AACTGACAAGAACTTTCTCTTCTAACTACAGACCACACAAACAAGAGATT
ATCCCTAACCGataaatcaatttttcaaaaccaaACCAGAATCTCTNCTA
ACTACAGACCACACAAACAAGAGATTATCCCTAACCGATAAATCAATTTT
CCAAAACCAAACCAGAATCTCTTTATGAAAAACCTTAACATGACCTTCAA
TGTCTTAAATAACAAACAATCTTGGGAAAGCAGGGAAAGTGAGAAAAAGA
gaagttttaacatttttcaatttctaacaACATATcaaaagtgtcaaaat
tttCACTCACTAATTGAGTTAACTGACAGAGTGTCAAAAAGTTTAAGGTG
TTTCACAGCACAGgatcttaaaaattaaaaaaaaattaatgaaagtaGGA
CTTATCTCTCAATTTATTAAAATAATGAATGAGAAGCTGTATTTAGCATT
TAAATAAAGTGAGTCAATAAGATTGAAGTTACCAGTACCATGAAGTTACC
TTTTTTGAAGAATACTCAGaaactttctcaaaaaataataaagcgATTTT
GACTTTAATCTAAAttctaaaacagaaaaaattattGTGCTCATTATATT
TGGACTAGACTATTAAAATGACCTATGTATATTGAGAAGAAAAGAGTTCA
CTATGCTCACAAAAACATCTTAAAGTAGTTGTGAACAGTTAGTCTAAATG
AGGGATAACTATCGCTATCCATAAAAATAGCAtagtttcaattttccttg
ATTTGATTGTGCGGTATAATCCATGCACTTgtgtttttgagattttttta
atttgatcttGGATATGTTTCTCAATGTCAACTTTGTGTGTAGGGTCTCG
CTTTCTTTAACTTTGTCTTTAATTTAATATTGTTGTGTTGGAAACACAAA
CTTTGTTTCAGAACGTTGTATATTATGTAGACAAGGTGCTCAAATTTAAG
ACCATTCAGCTACATGTTGAAAAAGTCTGCCCATTTTTTTATAGTGTCTA
GATCATTTTGTAGATGACAAACATCATAGTGGGAACCCCCCTAACTTTAG
GGGGGGTTGgaggttttcagaaaaatttaagcagGTGGGGGTTAGCCTGC
TCACAAATCTTAGGTGGGGGTTACCCTATA Run BLAST on NCBI transcript from alignment at sc0000200:257084..258663 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014921 ID=TCONS_00014921|Name=TCONS_00014921|organism=Clytia hemisphaerica|type=transcript|length=1580bp|location=Sequence derived from alignment at sc0000200:257084..258663 (Clytia hemisphaerica)
TATAGGGTAACCCCCACCTAAGATTTGTGAGCAGGCTAACCCCCACctgc
ttaaatttttctgaaaacctcCAACCCCCCCTAAAGTTAGGGGGGTTCCC
ACTATGATGTTTGTCATCTACAAAATGATCTAGACACTATAAAAAAATGG
GCAGACTTTTTCAACATGTAGCTGAATGGTCTTAAATTTGAGCACCTTGT
CTACATAATATACAACGTTCTGAAACAAAGTTTGTGTTTCCAACACAACA
ATATTAAATTAAAGACAAAGTTAAAGAAAGCGAGACCCTACACACAAAGT
TGACATTGAGAAACATATCCaagatcaaattaaaaaaatctcaaaaacac
AAGTGCATGGATTATACCGCACAATCAAATcaaggaaaattgaaactaTG
CTATTTTTATGGATAGCGATAGTTATCCCTCATTTAGACTAACTGTTCAC
AACTACTTTAAGATGTTTTTGTGAGCATAGTGAACTCTTTTCTTCTCAAT
ATACATAGGTCATTTTAATAGTCTAGTCCAAATATAATGAGCACaataat
tttttctgttttagaaTTTAGATTAAAGTCAAAATcgctttattattttt
tgagaaagtttCTGAGTATTCTTCAAAAAAGGTAACTTCATGGTACTGGT
AACTTCAATCTTATTGACTCACTTTATTTAAATGCTAAATACAGCTTCTC
ATTCATTATTTTAATAAATTGAGAGATAAGTCCtactttcattaattttt
ttttaatttttaagatcCTGTGCTGTGAAACACCTTAAACTTTTTGACAC
TCTGTCAGTTAACTCAATTAGTGAGTGaaaattttgacacttttgATATG
TtgttagaaattgaaaaatgttaaaacttcTCTTTTTCTCACTTTCCCTG
CTTTCCCAAGATTGTTTGTTATTTAAGACATTGAAGGTCATGTTAAGGTT
TTTCATAAAGAGATTCTGGTTTGGTTTTGGAAAATTGATTTATCGGTTAG
GGATAATCTCTTGTTTGTGTGGTCTGTAGTTAGNAGAGATTCTGGTttgg
ttttgaaaaattgatttatCGGTTAGGGATAATCTCTTGTTTGTGTGGTC
TGTAGTTAGAAGAGAAAGTTCTTGTCAGTTTTTGTCTGATGGAaggtttt
tcatcatttttttcgtcAATTCTGCCAATTTAACGTAGTGTTGAATCCTT
TAATGATCCATGTTTTAAGAAGCTATTGATTAGAATTACTTGTGGATTCT
TTACGGATTGAAGATAGAATTTTCTCCCTTTTATTTCAATTCTCTCTCCC
TAGAGAATTCACCTGtctcttatttttctttgcctTAATCATTGTTTTAG
CTACAGctaaaataagagaaaaatggTAAAGAAATAGAACAAAATGTATA
GTAAGGAAATTTATGGGGAGAAGAAAAATGTTGTAGACAAGATAAAAAAA
AGCTAGTTCCTCGCCATCTTATTGGCTCTATACTATTTTAAATAAGTTTT
attctttgaatatttttaattttttcaatatttttttgaaaaaaaggagG
AGAGTTTCTTCTCTATCTTCCCTATCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014921-exon-sc0000200-1491911889:257084..258663 | TCONS_00014921-exon-sc0000200-1491911889:257084..258663 | Clytia hemisphaerica | exon |
| TCONS_00014921-exon-sc0000200-1510915933:257084..258663 | TCONS_00014921-exon-sc0000200-1510915933:257084..258663 | Clytia hemisphaerica | exon |
| TCONS_00014921-exon-sc0000200-1575043694:257084..258663 | TCONS_00014921-exon-sc0000200-1575043694:257084..258663 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000200 | supercontig | sc0000200:257084..258663 . |
Blast
The following BLAST results are available for this feature:
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