TCONS_00014916 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014916
Unique NameTCONS_00014916
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length136

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014916 ID=TCONS_00014916|Name=TCONS_00014916|organism=Clytia hemisphaerica|type=transcript|length=136bp
tgatctcAATGTTATGTGGTCatgtcctttttttcttctattgaTTATGG
TGTAAATGCCTGAAAGCTGCTTTAAATGGAGTAGTTAGTTGAACAGGAAG
TATTCAGCCCTCAGACAGCGATGAGATTTTAGCTAC
Run BLAST on NCBI

transcript from alignment at sc0000200:28893..29028

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014916 ID=TCONS_00014916|Name=TCONS_00014916|organism=Clytia hemisphaerica|type=transcript|length=136bp|location=Sequence derived from alignment at sc0000200:28893..29028 (Clytia hemisphaerica)
GTAGCTAAAATCTCATCGCTGTCTGAGGGCTGAATACTTCCTGTTCAACT
AACTACTCCATTTAAAGCAGCTTTCAGGCATTTACACCATAAtcaataga
agaaaaaaaggacatGACCACATAACATTgagatca
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008338XLOC_008338Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014916-exon-sc0000200-1491911889:28893..29028TCONS_00014916-exon-sc0000200-1491911889:28893..29028Clytia hemisphaericaexon
TCONS_00014916-exon-sc0000200-1510915933:28893..29028TCONS_00014916-exon-sc0000200-1510915933:28893..29028Clytia hemisphaericaexon
TCONS_00014916-exon-sc0000200-1575043694:28893..29028TCONS_00014916-exon-sc0000200-1575043694:28893..29028Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000200supercontigsc0000200:28893..29028 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014916 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top