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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014870 ID=TCONS_00014870|Name=TCONS_00014870|organism=Clytia hemisphaerica|type=transcript|length=988bpRun BLAST on NCBI transcript from alignment at sc0000200:429505..461139+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00014870 ID=TCONS_00014870|Name=TCONS_00014870|organism=Clytia hemisphaerica|type=transcript|length=31635bp|location=Sequence derived from alignment at sc0000200:429505..461139+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
No biomaterial libraries express this feature.
Blast
BLAST of TCONS_00014870 vs. Swiss-Prot (Human)
Match: CCNL2 (Cyclin-L2 OS=Homo sapiens GN=CCNL2 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.253e-88 Identity = 89/143 (62.24%), Postives = 112/143 (78.32%), Query Frame = 3
Query: 558 YFNLKNGIIKAERRILKDLGFCVHVKHPHKLIITYLQMIGHEKNQNLARRAWNYMNDSLRSDVFVRFPPESIACACIFLAARNEQVPLPQRPAWFQIFDATYNEIEDISISIMRLYSKPKRKLAHLESLVSKLRKEKAEKEKT 986
Y NLKN IIKAERR+LK+LGFCVHVKHPHK+I+ YLQ++ E+NQ+L + +WNYMNDSLR+DVFVRF PESIACACI+LAAR ++PLP RP WF +F AT EI++I + I++LY++ K L HLE V K RK E+ K
Sbjct: 169 YVNLKNQIIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQHLVQTSWNYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICLKILQLYARKKVDLTHLEGEVEK-RKHAIEEAKA 310 HSP 2 Score: 153.68 bits (387), Expect = 2.253e-88 Identity = 71/112 (63.39%), Postives = 89/112 (79.46%), Query Frame = 1
Query: 112 YDRILISLENCILPSERLDETPSMKDGLDRDTENDLRSFACEMIQIAGILLKIPQVAMATGQVLLQRFYFSKSMVKLDVEVSAMAAIFLAAKIEESPRRIRDVINVCHHIKQ 447
Y +LI+LENC+LP ++L TPSM GLD DTE DLR CE+IQ AGILL++PQVAMATGQVL QRF+++KS VK +E +MA + LA+KIEE+PRRIRDVINV H ++Q
Sbjct: 42 YSGVLITLENCLLPDDKLRFTPSMSSGLDTDTETDLRVVGCELIQAAGILLRLPQVAMATGQVLFQRFFYTKSFVKHSMEHVSMACVHLASKIEEAPRRIRDVINVFHRLRQ 153 The following BLAST results are available for this feature:
BLAST of TCONS_00014870 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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