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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014664 ID=TCONS_00014664|Name=TCONS_00014664|organism=Clytia hemisphaerica|type=transcript|length=2725bp
CCGACATTACTTTGAGGATTGGCCATATTAATGACCTTATTTCGAAATTT
CTATTTTGCTCTTTTATATGAAAACCATGGACCTCTTACACAAGTTACTA
GACGTGAAGCAGGTCNCTCGTTTTGCTCTTTTATATGAAAACCATGTACC
TCTTAAACAAGTTACTAGACGTGAAGCAGGTCTTCTTCTGAAACCCTGGA
TCTCTAGAGGTATTCCCACTTCGATGAAAATTAGAGATGGCTTATTTCGT
GACTATCTAAACACAAACTACCTGATCTGAAGGCTTTCTTGCGTATTAGG
TATAGATTTTATCGTAACCGAATCGTTTTTCTCTGTCGTTTGAGTAAAAA
ACTTCACTattctaaattcttttttcataatTCAGGAAATATTCGTAAGT
TATGGGAGGGCGTTCGTGAAATTATATCCTCTTCCTCATCTTCATCCACA
ACAAATCCACGGGTCCAAGTAGCATATCCTATCCGATAATCAATTCAAAT
CTACAAAGCTTTTCTCTTATTCTTCTGACATTATCAACTTGTTTTATCTA
TTCTGGTATTTTTCCATCTAAACTCAAAGAAGCCAAAGTCATAcctatct
ttaaagaaaaaggCTCTCCACTTGATGCTGAAAACTACAGGCCCATCTCT
CTGCTCTCAAACAttgataaaatctttcaaaaacttatGCACAAACGTCT
TATGACTTTTCTTGATCAATCAGGCTCTTTGCATCCACTCCAGTTTGGTT
TCCGCTCAAAATACTCTACAGAAACAGCACTTCAATATTGTGTTGATCAA
ATCTTAACTGCTCTGGATGAAGGTGAGTATGGCTGCTCCATTTTCATTGA
CTTACAAAAAGCTTTTGATACCGTTGACCATGAGAATTTAAACTTCAAAA
CTAGAATTCTATGGGGTTCGTGGGACAGCTCTCTTTTTTTATCTGATTGA
TCACAATTTGTGTCTATTTCTAGCATTAGTTCTAAAACTAAGCCTATGCT
TCATGGTGTTCCCCAAAGCTCTGTTCTTGAACCATTATCATTTCTTCTTT
ACGTTAACGACTTGCATATCGCCCTTCCTTTTTCCCTAGTTAATTTATTC
GCTGATGACACAATGCTTTCTATCAGAAACGAACTCTTGAAACTGTAACA
ATCACCTTTCTGTTGTTACTAAAGTATATTCCGTAAGTCTTATTTTCGAA
TGACTCCAAATAATGATTTAACACGATATATTTATGGGGTTCGCTATTAA
TTAATTTCCCTTAGAttgttttcttcttcctttAAATTCAAACTCGTAAT
TACAATATAGGATTATGTTTAGCGTGGGCTGATGGCCTTGCTATTTGTTT
CTTAGGCTGATGGCCTATCTTCTTTCGCTTTATTTCTTCTCTATTCGCTT
GCTCCCCCCGACTGACTTCCTTGATTTCGACTCCTGTATTTATACTATTT
TTGAGGCGGTGGAGCACCactccttcttcttgtttttcccacggtttctt
ttgtttgatgAAGAACGTTGCTCCGACGTTGCCTTGTCTCGCCAGTACGT
TTTGTCTTTAAGAATTTCGTGTAACGCAATTTGCGGTTAGGGTTTTTCCA
TTTGCTAGGACTTGTCCAAACCTTTTTCTTGCGGAATTTATAACACTCCT
TATTTGGGCCTTACGGATTATCTTTTTTCTCACGGTTGAGTGGATCGTTC
GTTAAACGTTTACCTAAAAGTTTGTTCTCTTGGTTTGATTGGTGGATTAA
TTGCAACATTAGGTAATGTTTTTGTCAGGTTTGTATCGAAAATCTCGTGC
TTACGTAGTTGGTGGTTTGGTCTCTACCGAGAGGAATGTTCGATTACAAG
GGATTATCTTTTTTTCTCGCGATTGTTCGAATCGTTCGTTAAACGTTTGC
TTTCAGAGTTCATTACAAATTTTGATTGGTGAATTTACAAAGCTATTTGA
TTGGTTGTATATTTGGAGAATAGAAGGCAGCTATCGTTGTTGTTAGCTAC
GGCGGTATGATTGGATAACTTTTATTGATAGAAGTTAACTTTAGaataaa
tatgatatttacatttAGTAAAGGATGCACTCGTGACAAAACCTATAGCC
AAGCAAGCTAACATCGATCTTAAACTTCTATTGCATTGGTTGAATGCAAT
CAAGATATCTCTGAATGCTAACAAAACTGAGTCAGCTTATTATCTTTAGA
CCtattagaaagaaaataaactacgatctaaaaataaaaatcaacggACA
CAGACTCAGACCTAGtaactttgtgaaatattttggtGTATACATCGATG
AACATCTAAACTGGAAGCACCACATTGATTTTGTTTGCAACAAATTAAAA
CGTGCGAATGGTGCACTGAGTAAACTtcggcattatgtcgacaagaaaat
gtttttagcaTTATATTATTCTTTATTTCACTCTGGGGAAAACACCAATC
TGTTCACGCCCGTCGAATTCTAACACTACAAAAGCAAGCTCTCCGAATTA
TGATATTTTCCGATTTTCGAGCAACATTCCTCACCTCTCTTCTTGGATCA
TACtcttttaaccttttttgacttcgtaaaatacctaaaaattattttta
tttacaaaatcttTAATCGAATGTTACCACCTCTTCTGCAAGAACACTTC
ATTTTGACTCGTCTTGATGATGTTGAGCGTCATGAAGTCATGCGATGTAA
ATCTGGTCTGTTAAAACTTCCCGAG Run BLAST on NCBI transcript from alignment at sc0000191:424258..426982 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014664 ID=TCONS_00014664|Name=TCONS_00014664|organism=Clytia hemisphaerica|type=transcript|length=2725bp|location=Sequence derived from alignment at sc0000191:424258..426982 (Clytia hemisphaerica)
CTCGGGAAGTTTTAACAGACCAGATTTACATCGCATGACTTCATGACGCT
CAACATCATCAAGACGAGTCAAAATGAAGTGTTCTTGCAGAAGAGGTGGT
AACATTCGATTAaagattttgtaaataaaaataatttttaggtattttac
gaagtcaaaaaaggttaaaagaGTATGATCCAAGAAGAGAGGTGAGGAAT
GTTGCTCGAAAATCGGAAAATATCATAATTCGGAGAGCTTGCTTTTGTAG
TGTTAGAATTCGACGGGCGTGAACAGATTGGTGTTTTCCCCAGAGTGAAA
TAAAGAATAATATAAtgctaaaaacattttcttgtcgacataatgccgaA
GTTTACTCAGTGCACCATTCGCACGTTTTAATTTGTTGCAAACAAAATCA
ATGTGGTGCTTCCAGTTTAGATGTTCATCGATGTATACaccaaaatattt
cacaaagttaCTAGGTCTGAGTCTGTGTccgttgatttttatttttagat
cgtagtttattttctttctaataGGTCTAAAGATAATAAGCTGACTCAGT
TTTGTTAGCATTCAGAGATATCTTGATTGCATTCAACCAATGCAATAGAA
GTTTAAGATCGATGTTAGCTTGCTTGGCTATAGGTTTTGTCACGAGTGCA
TCCTTTACTaaatgtaaatatcatatttattCTAAAGTTAACTTCTATCA
ATAAAAGTTATCCAATCATACCGCCGTAGCTAACAACAACGATAGCTGCC
TTCTATTCTCCAAATATACAACCAATCAAATAGCTTTGTAAATTCACCAA
TCAAAATTTGTAATGAACTCTGAAAGCAAACGTTTAACGAACGATTCGAA
CAATCGCGAGAAAAAAAGATAATCCCTTGTAATCGAACATTCCTCTCGGT
AGAGACCAAACCACCAACTACGTAAGCACGAGATTTTCGATACAAACCTG
ACAAAAACATTACCTAATGTTGCAATTAATCCACCAATCAAACCAAGAGA
ACAAACTTTTAGGTAAACGTTTAACGAACGATCCACTCAACCGTGAGAAA
AAAGATAATCCGTAAGGCCCAAATAAGGAGTGTTATAAATTCCGCAAGAA
AAAGGTTTGGACAAGTCCTAGCAAATGGAAAAACCCTAACCGCAAATTGC
GTTACACGAAATTCTTAAAGACAAAACGTACTGGCGAGACAAGGCAACGT
CGGAGCAACGTTCTTcatcaaacaaaagaaaccgtgggaaaaacaagaag
aaggagtGGTGCTCCACCGCCTCAAAAATAGTATAAATACAGGAGTCGAA
ATCAAGGAAGTCAGTCGGGGGGAGCAAGCGAATAGAGAAGAAATAAAGCG
AAAGAAGATAGGCCATCAGCCTAAGAAACAAATAGCAAGGCCATCAGCCC
ACGCTAAACATAATCCTATATTGTAATTACGAGTTTGAATTTaaaggaag
aagaaaacaaTCTAAGGGAAATTAATTAATAGCGAACCCCATAAATATAT
CGTGTTAAATCATTATTTGGAGTCATTCGAAAATAAGACTTACGGAATAT
ACTTTAGTAACAACAGAAAGGTGATTGTTACAGTTTCAAGAGTTCGTTTC
TGATAGAAAGCATTGTGTCATCAGCGAATAAATTAACTAGGGAAAAAGGA
AGGGCGATATGCAAGTCGTTAACGTAAAGAAGAAATGATAATGGTTCAAG
AACAGAGCTTTGGGGAACACCATGAAGCATAGGCTTAGTTTTAGAACTAA
TGCTAGAAATAGACACAAATTGTGATCAATCAGATAAAAAAAGAGAGCTG
TCCCACGAACCCCATAGAATTCTAGTTTTGAAGTTTAAATTCTCATGGTC
AACGGTATCAAAAGCTTTTTGTAAGTCAATGAAAATGGAGCAGCCATACT
CACCTTCATCCAGAGCAGTTAAGATTTGATCAACACAATATTGAAGTGCT
GTTTCTGTAGAGTATTTTGAGCGGAAACCAAACTGGAGTGGATGCAAAGA
GCCTGATTGATCAAGAAAAGTCATAAGACGTTTGTGCataagtttttgaa
agattttatcaaTGTTTGAGAGCAGAGAGATGGGCCTGTAGTTTTCAGCA
TCAAGTGGAGAGcctttttctttaaagataggTATGACTTTGGCTTCTTT
GAGTTTAGATGGAAAAATACCAGAATAGATAAAACAAGTTGATAATGTCA
GAAGAATAAGAGAAAAGCTTTGTAGATTTGAATTGATTATCGGATAGGAT
ATGCTACTTGGACCCGTGGATTTGTTGTGGATGAAGATGAGGAAGAGGAT
ATAATTTCACGAACGCCCTCCCATAACTTACGAATATTTCCTGAattatg
aaaaaagaatttagaatAGTGAAGTTTTTTACTCAAACGACAGAGAAAAA
CGATTCGGTTACGATAAAATCTATACCTAATACGCAAGAAAGCCTTCAGA
TCAGGTAGTTTGTGTTTAGATAGTCACGAAATAAGCCATCTCTAATTTTC
ATCGAAGTGGGAATACCTCTAGAGATCCAGGGTTTCAGAAGAAGACCTGC
TTCACGTCTAGTAACTTGTTTAAGAGGTACATGGTTTTCATATAAAAGAG
CAAAACGAGNGACCTGCTTCACGTCTAGTAACTTGTGTAAGAGGTCCATG
GTTTTCATATAAAAGAGCAAAATAGAAATTTCGAAATAAGGTCATTAATA
TGGCCAATCCTCAAAGTAATGTCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014664-exon-sc0000191-1491911889:424258..426982 | TCONS_00014664-exon-sc0000191-1491911889:424258..426982 | Clytia hemisphaerica | exon |
| TCONS_00014664-exon-sc0000191-1510915933:424258..426982 | TCONS_00014664-exon-sc0000191-1510915933:424258..426982 | Clytia hemisphaerica | exon |
| TCONS_00014664-exon-sc0000191-1575043694:424258..426982 | TCONS_00014664-exon-sc0000191-1575043694:424258..426982 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191 | supercontig | sc0000191:424258..426982 . |
Blast
The following BLAST results are available for this feature:
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