TCONS_00014519 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014519
Unique NameTCONS_00014519
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length313

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014519 ID=TCONS_00014519|Name=TCONS_00014519|organism=Clytia hemisphaerica|type=transcript|length=313bp
gaaacataaaTACAgggtacactacgaacatatactaCAAAATACTACTA
AACATTAATAAAGTCCCTCCCTTCGCTGGAAACTtaagttatatcgccag
aggtaatagactatgaagaaaggaaaaagtaaaacaaggtGTGACGTGGA
GAGAGCTAATGGCTGTAATAGACTAAAATAACGCACCACTGAACCTTCCA
GATTCATGGATATATTCAACGACAGAAaggattatattttgatttgagaT
TGAAGTCAAGCTTTCGTTAACCGTATAATAAAAGCTGACAAAAATAAGAA
GGGTTTTAGTGGG
Run BLAST on NCBI

transcript from alignment at sc0000188:113632..113944

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014519 ID=TCONS_00014519|Name=TCONS_00014519|organism=Clytia hemisphaerica|type=transcript|length=313bp|location=Sequence derived from alignment at sc0000188:113632..113944 (Clytia hemisphaerica)
CCCACTAAAACCCTTCTTATTTTTGTCAGCTTTTATTATACGGTTAACGA
AAGCTTGACTTCAAtctcaaatcaaaatataatcctTTCTGTCGTTGAAT
ATATCCATGAATCTGGAAGGTTCAGTGGTGCGTTATTTTAGTCTATTACA
GCCATTAGCTCTCTCCACGTCACaccttgttttactttttcctttcttca
tagtctattacctctggcgatataacttaAGTTTCCAGCGAAGGGAGGGA
CTTTATTAATGTTTAGTAGTATTTTGtagtatatgttcgtagtgtacccT
GTAtttatgtttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008125XLOC_008125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014519-exon-sc0000188-1491911889:113632..113944TCONS_00014519-exon-sc0000188-1491911889:113632..113944Clytia hemisphaericaexon
TCONS_00014519-exon-sc0000188-1510915933:113632..113944TCONS_00014519-exon-sc0000188-1510915933:113632..113944Clytia hemisphaericaexon
TCONS_00014519-exon-sc0000188-1575043694:113632..113944TCONS_00014519-exon-sc0000188-1575043694:113632..113944Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000188supercontigsc0000188:113632..113944 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.665116	3.08905	2.26662	0.459898	0	0.876896	0	2.29904	0.355966	0.425167	0.908496	1.37814	2.35543	0.387296	2.49377	0	0.262402	1.81261	3.03483	1.49444	0.964976	0	0	2.56304	1.96067	0.46762	0	1.89258	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014519 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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