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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014468 ID=TCONS_00014468|Name=TCONS_00014468|organism=Clytia hemisphaerica|type=transcript|length=1158bp
AACACTCTCGATCAAGCCTTGGCGCTCTCAACAGCAATTGTTGGGTTTAT
TGCGTTACTACTAAACTTAATATGCGTCATCAAAATCATCCAGAAACAAG
GTTTCTGCATCATATCAACCTCTGGTCAAATATTTATGGCATCCTTATGT
GGCTCAAACATACTAATTGCTTCAACTGCAATCACCAAAGAATTACTTAT
AATATTTCTTGCTAACtcagcaaaaattccaaaaacatGGATACATTTCG
AATGGTATATAACAATTTTCTGTTTAATATCATCAACATTACACATTATC
TCCATAATGGTATCTTACTTGATAAACACATTGATGAAAGTTCNTTTATT
GCGTTACTACTAAACTTAATATGCGTCATCAAAATCATCCAGAAAAAAGG
TTTCTGCACCATATCAACCTCTGGTCAAATATTTATGGCATCCTTATGTG
GCTCAAACATACTAATCGCTTCAACTGCAATCGCCAAGGAAATacttaaa
atatttcttgctAACTCAGCAAAAATTCCGAAAACATGGAGACATTTCGA
ATGgtatataaccattttctgtTTAATATCATCAACATTACACATTATCT
CCATAATGGTATCTTACTTGATAAACACATCGATGAAGGTTCCAAAATAC
GTTGGAACTTGTGGACGCGTTATTGATAGTTTTATTATCTCCTTAATATG
GACTTTATCGCTTTTACCAGCTTACTTCAAATATGATGGAGAtaattata
aaatatttttgaactcgATGTCTTTCTTATTACTAAGTTCGTTATTTGTG
CTTGTGACTCTACTAGTCTTCATTTTGAGATGTAAACAAAGAACAAAATC
GACCAATTCTAACGATGAGACAACCATACGGCGGACGAACATGATCAAAA
CATATTGGATTCGGTGCCGGCAAAAAGAACGAATTATTTGTTTAGCAATG
ATGGCGTCTTATCTCATATGTAGTTGTCCGTACATGATTTATTACCCGGT
ATTAGGGAAAGTATACACGTCCACATTTCAGCCAGACcaaattgataaaa
ttttgttCATGTTCATTTTGTTAAAAACCGTTTGTGATGCAGTCATATAC
ATCATACGTAAAGGTTGGAACAGGGAAGAACAGAAAGTCAAATTCCGTAT
AAACTCAC Run BLAST on NCBI protein sequence of TCONS_00014468-protein >TCONS_00014468-protein ID=TCONS_00014468-protein|Name=TCONS_00014468-protein|organism=Clytia hemisphaerica|type=polypeptide|length=307bp
MDTFRMVYNNFLFNIINITHYLHNGILLDKHIDESXFIALLLNLICVIKI
IQKKGFCTISTSGQIFMASLCGSNILIASTAIAKEILKIFLANSAKIPKT
WRHFEWYITIFCLISSTLHIISIMVSYLINTSMKVPKYVGTCGRVIDSFI
ISLIWTLSLLPAYFKYDGDNYKIFLNSMSFLLLSSLFVLVTLLVFILRCK
QRTKSTNSNDETTIRRTNMIKTYWIRCRQKERIICLAMMASYLICSCPYM
IYYPVLGKVYTSTFQPDQIDKILFMFILLKTVCDAVIYIIRKGWNREEQK
VKFRINS Run BLAST on NCBI transcript from alignment at sc0000187:409125..410282 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014468 ID=TCONS_00014468|Name=TCONS_00014468|organism=Clytia hemisphaerica|type=transcript|length=1158bp|location=Sequence derived from alignment at sc0000187:409125..410282 (Clytia hemisphaerica)
GTGAGTTTATACGGAATTTGACTTTCTGTTCTTCCCTGTTCCAACCTTTA
CGTATGATGTATATGACTGCATCACAAACGGTTTTTAACAAAATGAACAT
GaacaaaattttatcaatttgGTCTGGCTGAAATGTGGACGTGTATACTT
TCCCTAATACCGGGTAATAAATCATGTACGGACAACTACATATGAGATAA
GACGCCATCATTGCTAAACAAATAATTCGTTCTTTTTGCCGGCACCGAAT
CCAATATGTTTTGATCATGTTCGTCCGCCGTATGGTTGTCTCATCGTTAG
AATTGGTCGATTTTGTTCTTTGTTTACATCTCAAAATGAAGACTAGTAGA
GTCACAAGCACAAATAACGAACTTAGTAATAAGAAAGACATcgagttcaa
aaatattttataattaTCTCCATCATATTTGAAGTAAGCTGGTAAAAGCG
ATAAAGTCCATATTAAGGAGATAATAAAACTATCAATAACGCGTCCACAA
GTTCCAACGTATTTTGGAACCTTCATCGATGTGTTTATCAAGTAAGATAC
CATTATGGAGATAATGTGTAATGTTGATGATATTAAacagaaaatggtta
tatacCATTCGAAATGTCTCCATGTTTTCGGAATTTTTGCTGAGTTagca
agaaatattttaagtATTTCCTTGGCGATTGCAGTTGAAGCGATTAGTAT
GTTTGAGCCACATAAGGATGCCATAAATATTTGACCAGAGGTTGATATGG
TGCAGAAACCTTTTTTCTGGATGATTTTGATGACGCATATTAAGTTTAGT
AGTAACGCAATAAANGAACTTTCATCAATGTGTTTATCAAGTAAGATACC
ATTATGGAGATAATGTGTAATGTTGATGATATTAAACAGAAAATTGTTAT
ATACCATTCGAAATGTATCCatgtttttggaatttttgctgaGTTAGCAA
GAAATATTATAAGTAATTCTTTGGTGATTGCAGTTGAAGCAATTAGTATG
TTTGAGCCACATAAGGATGCCATAAATATTTGACCAGAGGTTGATATGAT
GCAGAAACCTTGTTTCTGGATGATTTTGATGACGCATATTAAGTTTAGTA
GTAACGCAATAAACCCAACAATTGCTGTTGAGAGCGCCAAGGCTTGATCG
AGAGTGTT Coding sequence (CDS) from alignment at sc0000187:409125..410282 >TCONS_00014468 ID=TCONS_00014468|Name=TCONS_00014468|organism=Clytia hemisphaerica|type=CDS|length=921bp|location=Sequence derived from alignment at sc0000187:409125..410282 (Clytia hemisphaerica)
TGAGTTTATACGGAATTTGACTTTCTGTTCTTCCCTGTTCCAACCTTTAC
GTATGATGTATATGACTGCATCACAAACGGTTTTTAACAAAATGAACATG
aacaaaattttatcaatttgGTCTGGCTGAAATGTGGACGTGTATACTTT
CCCTAATACCGGGTAATAAATCATGTACGGACAACTACATATGAGATAAG
ACGCCATCATTGCTAAACAAATAATTCGTTCTTTTTGCCGGCACCGAATC
CAATATGTTTTGATCATGTTCGTCCGCCGTATGGTTGTCTCATCGTTAGA
ATTGGTCGATTTTGTTCTTTGTTTACATCTCAAAATGAAGACTAGTAGAG
TCACAAGCACAAATAACGAACTTAGTAATAAGAAAGACATcgagttcaaa
aatattttataattaTCTCCATCATATTTGAAGTAAGCTGGTAAAAGCGA
TAAAGTCCATATTAAGGAGATAATAAAACTATCAATAACGCGTCCACAAG
TTCCAACGTATTTTGGAACCTTCATCGATGTGTTTATCAAGTAAGATACC
ATTATGGAGATAATGTGTAATGTTGATGATATTAAacagaaaatggttat
atacCATTCGAAATGTCTCCATGTTTTCGGAATTTTTGCTGAGTTagcaa
gaaatattttaagtATTTCCTTGGCGATTGCAGTTGAAGCGATTAGTATG
TTTGAGCCACATAAGGATGCCATAAATATTTGACCAGAGGTTGATATGGT
GCAGAAACCTTTTTTCTGGATGATTTTGATGACGCATATTAAGTTTAGTA
GTAACGCAATAAANGAACTTTCATCAATGTGTTTATCAAGTAAGATACCA
TTATGGAGATAATGTGTAATGTTGATGATATTAAACAGAAAATTGTTATA
TACCATTCGAAATGTATCCat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014468-exon-sc0000187-1491911889:409125..410282 | TCONS_00014468-exon-sc0000187-1491911889:409125..410282 | Clytia hemisphaerica | exon |
| TCONS_00014468-exon-sc0000187-1510915933:409125..410282 | TCONS_00014468-exon-sc0000187-1510915933:409125..410282 | Clytia hemisphaerica | exon |
| TCONS_00014468-exon-sc0000187-1575043694:409125..410282 | TCONS_00014468-exon-sc0000187-1575043694:409125..410282 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000187 | supercontig | sc0000187:409125..410282 . |
Blast
The following BLAST results are available for this feature:
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