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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014398 ID=TCONS_00014398|Name=TCONS_00014398|organism=Clytia hemisphaerica|type=transcript|length=2100bp ATTATGAATGTTCAGATTGATTTGAAATAAATTCTTGTCGAATTTCAGAA TCAATTGaagaatttcaaatcaattattGAAGAAGTGTTGTTTTCTATGT TCTACCATGATTTAATATAAAAAGTTTGAAGAGAGATAGCTGTGCATGCG CTGACTAAAAAGATAGTTGAAAAAGAGCATTTTTATCTGGTATTTTTACA AGAAAAGGCACGTGAGAGTTCGACTtgattctattgttttatcagtATGT ATTGTATCTGATTGATCAGTTTTAGtgtattttgaccaaattttgaatCA AGAAATTTCTGTATACTGGTGTGATCGAGCTGAGCTGTTGTAGTAGTTGA AAATGTTGTATAGCAATTGACACAGAAATACTTAAGcAATGGCCGACTTC AAGAACGACATTCTTAAAACACACAACACATACCGTAAAACACATCGATC CAACCCTCTCAAATGGTCCAATAAGCTTCAAGCCAACGCCCAAAGATGGG CGGATAAACTAGCAAAGAAGGGATATCTCCAGCATGAAAACCAGTCAGAT GAGGGAGAAAATATCGCTTGTATGAAGGGAGCAGAGCTGACTGGTGAACG AGCTGCAACCATGTGGTACGATGAAGTCAAATATTATGATTACAGTAAAC CAACATTCAGCTCCAAGACAGGACATTTTACACAGCTTGTATGGAACGGA TCAACTGAGCTTGGTGTAGGCCGCGCGACCGCTTCAAACGGTATGCAATT TGTCGTCGCTCGATATAATCCACCCGGAAACATCCTTGGAAAATTCCCAG ACAACGTCTTTTCATCAAACGGTAAACCGCCACCAACGACGTCAAgcaac aatagcaacaataacCGGACGACAAGAAACAAGCCTGAAAAACGGCAACA ACAACCATCCAGTGATAAACAAACTGACAAAGATTTCAAGAATGCTGTCT TACGTACGCATAACCAATTACGTAAGCATCACGGCTCAGGCCCACTACGT TGGAACAGTTCTCTGGCTAGCCAAGCGTTAAGTGCGGCACAAGAGGCGGC TGAAACCAACACTCTACGCTCAGTGGATAACAACAAAGTGGGTCAAAATA TGGCAGCGATTTCCGGAGCTGAATTAACGGGTGAAAAAGTTTCCAACATG TGGTATGATgaggaaaagaaatataattATAGAGAAGCCAAATTCAGTTC AAGTACAGGAAGTTTCACACAACTTGTTTGGAAAGGGACAACCGATCTTG GTGTGGGTAGAGCTTTCGGACCTAACGGACAAACGTATGTTGTAGCTTTA TACCAACCAGCGGGAAATGTTAGAGGACTTTACAGTGAAAACGTTTTACA ATCACGTGGTACGAGGCCTGGGTCCAAGAAAGAGGATCAAGGGTGTGGCT GTGCCATCATGTAACACCTTCCAAATCAAAGATAATCTGATGTTTTGCTG ACTaataggaaaaattattttcaaaatggggACAGCTAAAAGTATGGCGA TTCCTTCAAATGACAATCGCCTTAAGTAGGCGTTCACTTTAAATGGCGGA TAGCTGCCaaaagtttacttgaaatagaCGGCCATGATAGATATCGTTAA GAAAATATGATATTCTTTGAATTTGGGTAGAACAAAGTTCATTTTTGATG AATATTCTGAAGACTGTCAAATAACTCGACTCTCAAGGTTGATTTAACCG GCAGGGAAACGTTTTTCTAGCGTTACTTTGGCTAAGGGACTAAACTTGCT TGATTTATCCTTTTTTTTATCCACCATTATTGCTATGAACTGTATATGTA TATCCAAATGTCAGAAAATTTTACAAACGATCTAAAATTTTATGCTGGtt cttaaaaatttagtttAGTTTTATGCATACAGTATAaccttttctttgaa aattcattaatattaataaaattgaaaacattttttgatttatgatttga TTTATAAATTAACGGCTAATTTTATAGCTAATGTTCTTAAGTCTGataat ttttgtagatattaTGATTTTTTCCGGAGAAAGTTAATTTTCACGGAAcc tttttgtatattttatttataGTTGATGATTTTTTGGGATAATAAATCAG Run BLAST on NCBI transcript from alignment at sc0000187:426530..445621+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014398 ID=TCONS_00014398|Name=TCONS_00014398|organism=Clytia hemisphaerica|type=transcript|length=19092bp|location=Sequence derived from alignment at sc0000187:426530..445621+ (Clytia hemisphaerica) ATTATGAATGTTCAGATTGATTTGAAATAAATTCTTGTCGAATTTCAGAA
TCAATTGaagaatttcaaatcaattattGAAGAAGTGTTGTTTTCTATGT
TCTACCATGATTTAATATAAAAAGTTTGAAGAGAGATAGCTGTGCATGCG
CTGACTAAAAAGATAGTTGAAAAAGAGCATTTTTATCTGGTATTTTTACA
AGAAAAGGCACGTGAGAGTTCGACTtgattctattgttttatcagtATGT
ATTGTATCTGATTGATCAGTTTTAGtgtattttgaccaaattttgaatCA
AGAAATTTCTGTATACTGGTGTGATCGAGCTGAGCTGTTGTAGTAGTTGA
AAATGTTGTATAGCAATTGACACAGAAATACTTAAGGTAAATATAACACA
ATCTGGCAGATCTAATAAAAATCTTGCATACCCAAATTTCACATTTTATC
ATAAGCGCTGCCTCATTCCGCTTGAAATATATTATGCACGACCCAAAGTA
TATACttcaaaaatctcgaaaatcCTGAATCGAAGATCTATAAAACTCAT
TAACAAATTCTTATAAATCCCAATAACTTGCTGCCCCTTCTCACTTTTGG
GAGTCAGTATAGGTTAAAACACCAAGTGTGACGGCCGctggtctttgttt
tgatatggTTCAATTTCATGTTACGTCATTAGTCACTTGGGATTGCATGT
CTCTCATCGTCTTCAGTATAATTAGGTCATTAGGGAATTGTAGAATGTGG
AGGCGTAGGAATTGAATTGTAAAAGATTTTCTACATTTATGTAACAGTAG
TAAGGTTGTGTATGTGATGCAATTTGTGGAGTGTTTGTTTTGGTGTcgtg
gaaaacttttttaattagtATCTATTTTCTAATGTGTTTGCTTGTATAGC
CCGGTATAGCCTTAGGTTCAGATAGCTTTAGGATAAAGTTTTTTTCGTTT
GTTTATATTCTAAgagtttgtattttttgtgttttagcGTTTGGAATAGC
AATCCAAACAGTAGAAAATATCGCACACCTTTTTGTATCCTCCCAACGTC
CCCTgtgggggggtttcatggttggcggaggagcggaatgggcccttttt
tcggacggagtggcggaatttggcgaagatttagacggaattacggaaag
tggggtctctgacggagacggaaaattagacaattttagtgcggaaaaac
ggaatttagtaAAATGTTTGCGGAATTTccgaattggtaaaagatattca
aaatttgcggaattttcgacaaaaatattgaatttcaaaggaattttcgg
tgacggaattttggttcaatttaagacggtttgacggAAATTGGAGAAAA
AATTGGCGGTATTGCGGAATCGGGTACCCCCTTAAACCCCCCCCCCCTGT
GGCCGTTCTAATTTCGTATTTAACCAGTTTGCAAAAActgcaatcatggt
cgaaatctattgggAATCAAGCTTATTTCctagtttttcgaaatttggag
ttcgggcgagaaagtcgattttggaccatctctcaaatttaataggatat
ttcaattttgctCGGGTTAGACCCCAAGGCTTAGGCCATTTTTAACATTT
GGATCCTTGGATCCTATgttcctaagtcttaagtctcatgttgaaactca
gagttaaaactctactcttccaaactactttagagcacttaacAAATCGa
atgtggtttcaaaacttcccggtggatttcccttttttctcaaatataac
GACTATGATTGTGGTCTCGCTTCTCGTATCCAATTGAATCTCTATTGACT
CGATTGCGTATCGTATTTAGTCGATTCCGGCCAAATCGATCTCGTATctt
caaaatcatcaaatgttGTGGTGAATTGATTTGAACTCGTATCGATCTAA
TCAAATTAACTCGAAATAACTCGAACGAAAATAACGAAGCTCTGCATGGA
GACAACAGATAacaacactagatagagctactttgtattttccaagcaaC
TGTAGGTGAAAcaaaataatccgccatctttgctgaaagtagatCGCAGT
TCGATATCGGCAAATTGTtcaaccaagcaaaaaaaaacataatggcGCGA
AGCGACGAGGCAAAAGATTGGCTTGATCGATCGAATTGCTGGTaccgaac
tatggtctactACTCGATTATTTCAACTCAAATAGGAacggagtagctct
atctagacACCTTAAGGTTTCTAAATATATAGAGAGTAAAATATTGTACG
CACGATTTTGACCTCTACACGCTTATTACCTAAATCTTTTTAACGATATC
TGGCATAAAGCAATACGGTGGAGAACGCAAGGAAGAGTAAACCCATAACA
TTTCACACTTCCTTAAAACGAATATCAATCCTGCTGGTCGCTCCATCGTT
GTGAAAGATTTTCAGTTTTCTATGGTATCCAGCTAAGTTAGAGTCTGGGG
ATAGTCTGATCGGAAATGTTCTAAGGAAGTTTATCATCAATACACATGCT
AAGATATTTGTCTTTAATCTGAATTGAGAGAATCTGATATCCCGTTCCTG
GACTCTGGTAAATTATTGATACTTATTATGTAACTGCAAGGTGCATTCAT
TTCAAACGCATACCGAAATCAACTATTGTTTTCCAAAGAAACTTTTGGTT
CTGTGactacagcacctgaccccgagaatgtaggtgaaaattGAATCAGA
CCTGggagatgtagatttgcatttaaaaaaatattgaatagtttaaacga
aattttgaactcccaaaatcctttcccaggggttagtttcattacttttg
atagataggcaatttttttggtccttgaagttgactcccattttcgttat
aacccccagaatgtaggtttggttttatggctttcaatctagtaatagta
aaatgttgatattttttcgattgaattaattataacaggaaattttagaa
atattttatgccaaaaaaatattctaaagagcttttgttattctgaaaat
tggattttttcgctttttaacccccagaacgtaggtgaaaagattcggtt
gctgagatcgaaatttcagtattcatcggaaatttttgttctctaagtga
aattcatactttagaaatatactctgacaaaaaattaacaaagatattaa
ttttatcgtgctacaaatgatgaaaagtaaaagaaaggacaaaaagaaga
gacaagaaagttgtttttattttgtaggttgaagatTCTCTGTTaaaatg
taacaacacccctgcctcacagccccggtggaacttttccaACATCGGGt
caaaaatttctactaaattcccaatggggatagaaattctattgttccaa
acttaggcaaattttctgattgggctggggtcccatCGGGTCTGGGACAC
GTTGTAAATGCTTGAAAtgccaaaattaatcatctctcaggtaatacttt
catgttatgaaagtacaacaaaaaagttttatataatttgacagactttt
tatgtcgggttatgaaggctcccaaattgtaggtcaactaaccccaaaag
gtaggtcaaacattttcgttgaaatatctaacttagaacaataaatattg
aaatggactattttccacatttccttagttcatcaggaataagaaaatac
cctatcatgataacttaattccaatagattttgatttagagaggatttat
ttaaaaaatgtctcaattcgagaagtatccaatcaacttcgattcagatt
ttcgcCTGTTAAAACTTCATGTCTAGAAATAATCAGTAATATGTAACGTT
Ttgctctgaaacaactttttattctcggggtttactacattctcggggtc
aggtgctgtacaatattggtcaaaatatattgagaattttggttaattcc
ccgtttttagcattttaaagtTCGGGTGAGAAAGAAGCTTTTGGGCTATT
TATTAGATCTactcgaatatttcaatttgggtggggtttatagacttcca
ggcaaTATTCTGAGCCCTAATTGGGccgttcttgaacttttggatcctca
gatctcAGAGTATCATGTTAAAACTctgagttaaaactctacccttccaa
actaagttagagcacttccaaatcgattgtggctataagatttagtgaga
attttcttttttggacctaccccggtggggtggaggtcctataaattaac
ccatgttcgttagttagttagttaccagcttttctcgagattggctcatt
agttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNcggagcccgattttcgaaaaaaaaatcttttgggcaaatttgggcc
aaaacggcttaaaaacgggttttttggactttgtgaaaaattggatcatt
tatttttctgatttttagcatgaaagtagggtacaatcatagctaaaaga
tggctcaagcagatttttgcaaaaaaatttttttggctcaaaaattgcat
ttttatctataagaaaccacttttaataagaatacatcaatgttcttagc
catattattattattatttttattagtttttttaagatgaaaatgtcacg
gtggagggtaatgatttgagttttctagaaacacttattatttNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaacctta
tttattaagctgtgcatttttctgatagtggtttttacaaagaaaagcgc
ttaatagcttttttatttctttttcaaaaatctttttcaacagTGTCGAT
AGTTTCTTTCAATAGatatatgctttcattttctttatttttttgtgtat
tttgacccagttatgtcttatgtgtttcattgtttcaatgttcactgatt
agtttgataaccaggtaggtccataaaagtatcgcttgtttttcaaacat
tatgGCCGGTATTGTAGACCCCTCTTTACCACACCAAAAATATTACACGA
AAAAAGGTGAGTGTAGGAGAAATATTTCGACAAGAGAGATtaaaaatgag
tttttcaaaCCCTCTTTAGTTTCACTTCCTATCCTAAAGTTTGTGTTATA
AAGGTGTACAGTGTTTTTATTTATGGCCATAACTTTTCAGCTAGTTGTCG
TGTATactaaaaaaagttggtatggTTTGAAAGATATTTGAATGCGCtga
tatttcaactttttggcTACGTTTTATAGAAAGGTGCTACCAAATGATTT
TTACGTCAATCGAAAGCTGAATCTAAAACTTTGAACTACATcgattttaa
ataattttcatttctttgagATAAATGAGTTCCATTTCTTCTGTCATTTA
CATAGATCTGGACTTTTTTTCTGAAGAATGTAACTTTTgtactactttag
gcgtacaaactttaaggagcagaaactttcgcgattttcgcaaatttttt
tgtcaaaatcgcgaaagtaaatgtagtagatttcgcgatttttctacctc
gcgaaagtttctgcttgcaaaagtttgtacacctaaagtaGTTAGAAAAT
TATTTGACCCACGATGAAAAATATGTGTTACCTATTGATTTAATATTCTG
AAAGAATCTCTAGAATCTAGGACATCCTGCATGGAAAACAAATTCATTTG
AATCTAATGACGTAAGTACGTGATGACATTTAAAACGACCAGTATTCTAT
GTTTGACATGTTGTCCCAAATGTTGATTTCAATTCAATGAATGGGTTAAG
AAGGTGCTGACAAGCCGCCCATGGGCGCCATGTATTAATTTCGATTCCGT
GcacatttttttatgattttgattttcattttgaatcaaagTGTGATATT
ATGCGATTTTAATTTTGTTATGAAACTTCAAAtggaaaacattatttttg
ccACTCGTATCCTAGATTTTGCCATTTTACATTTGGTTTTTACATTGATA
TTGTTTTTACATTGATATATTTGAAGTTTGAAGCAAAGGCTTTTCTTGGT
TGTAAGATTCGATTTGAAGgaatttttctttgcaaaaatcTCAATCCTCG
GTTACAGGTACATCACCAtatattattttgaagaatttacTGTAAGATTT
CACTTGAACGTTTCCTAGGTAGATTTCTTTCAatataaatttatttaaaa
aattattttacccTGTTTTACCTAATCATTGCTAAGGTAATTCTAATTTT
CTAAAGTAAGGCGATTGGCATTGAGCAGGTAAAGATTCTATAGTATCCCA
GCctacacacaacgttgtttcaacgttcattaaACGTTccttatatggac
gttgtgaacgttagataaacgttgaaacaacgttgtgtgccagctggaat
ATGTTTTTCAAAGGCAATAAACTGAGAATTCTTTATACAAATTTTCCAAA
GATAGTCAGggttttggatttcattttaCGTTTTTCTGCGGAAATTCAAT
GTTTTCCTACGTATTGTACGTACTCAACTGTTGAAAAAGTTGGAAAGAAA
CTTTTTGCAGACTGAGCAGTTTTTGAAGTGTCTGATATACAAAGCCAATG
AAAAATTGACGTAAATTATCGATAACTGGATTTAAGTGCGTGTCGAAATT
CatgtgtttttgatttttcatcaaatttgcaATCGCTGGAAAATCAATAG
GCTATAAGGTTCAgctcaacctcgttccctgtattatcagcttttttatg
cttaatgatagtgctagataataccctggcttTGTCTGATTACGTAATCC
AaactctggcgtcaatcagtaacgtaaataaaaccTGGGGTACATGGGAA
CGAGGCTGGGCTCAGCTTTGTTTGATCATNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNttatatggacgttgtgaacgtt
agataaacgttgaaacaacgttgtgtgccagctggaatATGTTTTTCAAA
GGCAATAAACTGAGAATTCTTTATACAAATTTTCCAAAGATAGTCAGggt
tttggatttcattttaCGTTTTTCTGCGGAAATTCAATGTTTTCCTACGT
ATTGTACGTACTCAACTGTTGAAAAAGTTGGAAAGAAACTTTTTGCAGAC
TGAGCAGTTTTTGAAGTGTCTGATATACAAAGCCAATGAAAAATTGACGT
AAATTATCGATAACTGGATTTAAGTGCGTGTCGAAATTCatgtgtttttg
atttttcatcaaatttgcaATCGCTGGAAAATCAATAGGCTATAAGGTTC
Agctcaacctcgttccctgtattatcagcttttttatgcttaatgatagt
gctagataataccctggcttTGTCTGATTACGTAATCCAaactctggcgt
caatcagtaacgtaaataaaaccTGGGGTACACGGGAACGAGGCTTGGCT
CAGCTTTGTTTgatcatgaaggtaataaaaatagatggagagtcaatgcc
ttttgttctattctgacatatcatcggaagcaaacagttgttttgttgct
ttgggaataggATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtagatcattttgtc
agagtatgaaaaccgctgcccacttcgacgtgaagattttaagacaggaa
actttcaaagaaaatgtgatGAAACTGTCAATGTTCAAAAAATGTCGGCC
CAAAAATAAGTCCTTCTGAAATTAATACATTCTTTTATCTTTACAACGGT
TGAAACTACTTCGAATCTTATTTTAACAAGGATTTCtcgtaaaattaagt
ttttcaaaatcaacgcaacagcctctttctgttctttAAAGTTGTAAATT
GATGCTTTTTGCTTCCGATGATGGTAAATCAAAGGAAAGCcgttttgaat
agatttataaaagatctGAACGACCATTTAGATCATTTACGCGacatttt
ctctccatctatttcTTTAATACCTTCGTGGTTTGATTGACCGACTAGTA
TCGATCTTCATATTCCAGTAAAAGTAAGATCATATCTGATAACTGTCAAC
GTGAGTTGCTGTTCAGTTCAAAAGGTTTATGTTATGTTAAGGAGGCAAAT
TGGGGTTTTCCAgaacaaatttgaatatgggagcgtggaggatataacat
tttttttgaaatttacccccggacatcATGACTTTTGAAACAGAAAAATT
ACTACCAAACAGAGCAATTTTACCCTCCGGACAAGAcaaatttgtagatt
tttcactaccccctgACACTATATGCTCCACTCCCCATGAACGGACATCT
TCTGGAAGAGCTCATTGCCACCCAGCTTCCTTAAAATGTAATATCGTATA
TAAAATTGCGACTTATACAAAGAACCAGTCGGACCACTTTCCCAACGGAG
AATTTGGCCAAAATGTTGTCCCCTGTGAGAAAAACAACCTACAATTTCAG
CTACTAAAGTTTTTATATCCGTTGAACTTTTGATAACAAATAATTACGAC
TGTGAGAAAAGGTTCCGCCGGAGTTTTTTAAGACATAGGTGTAAGGTTGA
TCTAAAATTCGTTAACTAAAGAATAAGGTCATCTTTCCCCCCGGAATAAC
TTTTAGACTTCGTTTAATTACATACTGATCAAGGAGCTGCCATTTCCAAC
TTTCTAACGAGAAAAGCTCGACTACATATTTAATCAAGAAATTCAAGGaa
ttattttgatcatttttgatTATTAATTACTGTGGCATGAATTATAAGTG
TAATTGATATATTAGTGCATTTTGATGTTGATTGCTTACTTACGTATCTG
AAATAGACAAGTTCACTGGAATAAAATTCCGTAAAGAATATAGTTGACGC
CGATCTCTTATCCGACTTTATACTATTCGATGCGCTCCATTGTCcagtaa
aattgaaaatcaacatCAGCAAGAACTTCTCATGAACGATGGTCTACTAT
TTGATCAAACTCCCATTTCCCTTGAAAATAGAATAGGGGACATCAACACT
AAAGTGCTGTAGAAACAGCTAATACCAAACAATCTCTTCGTGACTGCTGC
AACAGGTCTATTCATTTGGCATAGCACATTTAATCTACAGGACTTGAATG
TATAAATTTCAGAATGTGTTGAGAATAGCGAAGATGAAGAGATCAAGCTA
GATTAATTAGACTTTAATCCGACGAGTATAAAAGATTTGAAGTCCCCCTC
GAAAGTAAAGTCATTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA
AAACAAACCCCGATTGTTTCTTATCGGAAATTTCACGCTGATTCCGATTT
TTTAATCGGTTTTACCGTACCTCTGACGGTTGGGGCGTAATCTGATCAAA
TATAAAGGTCACCttaaaaacgtatatatacgtccTTAGGAACGTATCAA
AGACGTATATGTACGTCCTTAGGAGCGAAAAGGTTAaattgttcttgata
ttttggccattgaagcttTATGGTTTTTAATAGTTTGATCTTATAAGAAA
ACGCATATATGAATTTTATGGACGTCCGATAGACGTTATTTTAACGTTCT
GTGTGCCGGTTGGGATAAAAAACTTCTCCTTACAATAATCCTAATGGGTC
ATATTTGTTCGTACAGAAAGTTTTGGTATGGACCTTCATGTACTGACTGA
CTTACAGAGGATAATCCTTTTTATGATTCGATGCCAAAATGTTTACATCA
TTTTTCTCTTGTGATGTTGACCTCGTCATGTTTTTGTTAACCTGCTAATC
CAACCCCCTTTCATTTGGCAATAAGAAAATTCTTCTTGAGATATCTACTA
CTtacccagttggcacacaaagttgtttcaacgtttaaatAACGTCCACA
ACGTCGATATAACGtcaaatgaacgttgaaacaacgttgtgtgtcagctg
ggtataCAACCCTTAATAAACTGATACTAGCTTTGCCGTCTATATTACCA
ATAGTACCTTACTATATTACTATAGTACCAATCAATATGTTGCTTATCGG
TGTTCCTAGTCTAAATCGCATACCACTGTAGATATACTATGAAAAACTAG
TTTCGATGGAGGATGAGTAGAAGCCTATGGCGTTCCAACCAATGAATATT
GAAATATTCACCATTCTCATTTTTTCTTACAAATAATTATGTTGGAATGA
GGATAAATTGTATATTTTGTGTATGTATATTCGTTAATTGATTTGTTATT
TTTGCGGTCAGCTTTTTAAATGAACCAcgtcatttttaaacaaaaagtcA
CAAGATAGTCGtttaaaaagttgaagaaaaatgCTAAGCAAGTGAAATAT
CAATATCTCAAGTACATGCACCTTGTCAATTTTCGAAGCAACTCTATGGC
GTCATTTTTGTAATGGCCTTTCAATTTGTTTCGTTCGCCGCGCTCTTACA
TAACTGTTTGTGCTGACTTCAGAAGGAAAGAGTATAAAATGCAAGACTAT
GGTGGAAGTCGATCAGTTTCATAAAGTAGTCTAAAGAAATCATTCATTGA
AGAAACAGTTTTAATTATATTAGGTCGTTGAAATTCTTTAAACATGGATG
CTAAGCAAAGTAAGTATTTGATTTTAGCCGATTTGAAAAAAAGGAACCcg
tttctttctgtttttttcAGGGTATGGTATATTGGTCTCATTTAGTATCT
GTCCATTATCCGACGCACGAAACTATAGAATTCTTTAGGATTTGGTCAAC
GATAGCTAGATTCAAACCATTCGTTCgttcaaaagaaaaaggctGCTGTT
TAGGGATGTTTGAAATATGATGAAATCTTTCGCTGTTGGAGCTCTCATAG
ATGGCTGTAAAGtttgtaaaaatgtaaaaagaacATTCTAGAAAACTCCA
AGCTTGCTGTTTCTACTTTGTATAGATTATTGATGACGTTTTTGAACAGA
TATTCAAGATCGTGCTATTTTGCGGGGTCAAAGTAATTAGGATTTTTTTG
CGGTACAAATTTTCCTGTTTCAGCAATAAACCTACGCCTTAAATTCACAG
AGACCTTTTTTATGTTACGCTTAAAAAGTATTGACTCATATGTATTCAAT
ATTAGCTtgtttttcaattaaaatttcttttgatttctgTCTTGACTACC
AAAACTAAAGTTTTGTCCAAAACCCGTTTATCTTGGTTGGACATATTCTG
TGTTGGTTGATATCCCGGAATAAAAGATTTGTTTTGATGGAAAGTTTCAA
AGAATGCGGAAATTTTCATATTGAAgtcaattttcttttcccaATCTAAT
TTCTACTGACTAATGTTTTTTTGATATAcgtaatattttgaatattactT
TCGACTGTACTAATTCACTCCAAACTTTTATATGCATATCACAACTCATT
GACGTGCagaattttttctttcctttctacAATGCGTAGTATCCAGTAAC
ATACTTCGAGCCTTTACGACTTAACAATAACCTTAGTATCGACCAATAGT
ATAAGTCCGGTGCTGGTTATTAATTCAATTTTGCACAGTATGGAACCCGT
TACTTTTGAAAATCTCTGAATGACGCATTAGCCTGTACGTGCCTCTGGAA
GAAAAAAGCTCAAAAGCTATTTTcctatttcaaatttcaaaatgacgTGT
TATATGTAGGTGTATAAATCCTATAAAACCTCTAGAAAATCCTTAAGAAG
GCCATAAAGTACCAAATATTTGATTAAGACATACAAGTGATTTTGAAAGG
ATTTTTGTTCAGGTAGGTTTATATTAGGATTACTAAGGACTTAAAATTGT
GACAAGTAAAAGGGGTTTTTAAATATTGCTGGGAAAATTCGAGATTTGAG
TGGTATTGAGAGAAATAATGGAACGATATGATTGTTGGATAATTCCACGA
CTTGTATATCATTTTCGTTTGATCCTCTATATATCATtatcaagaaaaat
tgaagtGAAAGTACCTAGCCACGATAGAATTATTAGagtttttgaatata
ttttgcaTTGCATGGTGAAGAAAAATGCAAATGTGTTTTGATCCGGAGAT
TATGAAATGACATAGGGAGCACCTTGcgtttttgaatttgattttctttt
tggatCTAATCAATATTCTTCTTTGTTAAcatattgacaattttttttta
ttgtagcAATGGCCGACTTCAAGAACGACATTCTTAAAACACACAACACA
TACCGTAAAACACATCGATCCAACCCTCTCAAATGGTCCAATAAGCTTCA
AGCCAACGCCCAAAGATGGGCGGATAAACTAGCAAAGAAGGGATATCTCC
AGCATGAAAACCAGTCAGATGAGGGAGAAAATATCGCTTGTATGAAGGGA
GCAGAGCTGACTGGTGAACGAGCTGCAACCATGTGGTACGATGAAGTCAA
ATATTATGATTACAGTAAACCAACATTCAGCTCCAAGACAGGACATTTTA
CACAGGTATGCAGATTTTCATTTCTCTAATTACAAGCACGACGTACCGGG
TACGGCAGTCCGTCGGCCaccgtaccagattttcacgaaaaatcCTAAAA
TTATCCTCTTCTGTCGGAAAAATCGCTTAAACTCCTCATTCTCCGTACCA
GATTTAAAAAGCTTCCGTTGTGCCTGCTAATTATAATattcatgaaaata
ttttcataagcCATAAGAAAAGAGGACCAAATGTCGCTTCCAGATATATT
TTTACCCAAAATTATAATTTTGGCTTGTACTGTTTGTGTCACTTTTAAAC
CTTTTGGGGAGAAAGTTGACAGAGTCCAAGTTTCTCTGAGTACGACATTG
CTGTTAAAAATATACCTATCCTAGTTCCTGAGATTTCTGACAGATCTTAA
GCAGTGGAAATATTGTAATATTCTTTTTCTGCTCTATCTAGCTTGTATGG
AACGGATCAACTGAGCTTGGTGTAGGCCGCGCGACCGCTTCAAACGGTAT
GCAATTTGTCGTCGCTCGATATAATCCACCCGGAAACATCCTTGGAAAAT
TCCCAGACAACGTCTTTTCATCAAACGGTAAACCGCCACCAACGACGTCA
AgcaacaatagcaacaataacCGGACGACAAGAAACAAGCCTGAAAAACG
GCAACAACAACCATCCAGTGATAAACAAAGTACGTATCTTGATGAAATAT
CTAAGGGGCtcataaaaatgaaagtcaAACCTACGGGTGGACTAGCTCCA
CAGAAGCCAACCAGTTCCACACCTAGAAATGGATTAGTGTTGCAACCACG
GCAACCTGTTTCCGTTTCACTACCGACGACTGGTTTGGTAGTTCACCAAC
AAAAAGCTACTACTTCCACTCCCGTACCAAAGGGTGGATTAATAGTTCAT
CAGTATACAACGACGACCGCTACTTCAGGCCCTAAAAGCAGCCTAATGGC
TCATCAGCGCCACGAAGCTGGTCCTATTTCTGTCACCATTAAGACAGAAC
GTAGAGAGGAGATAAGCTTCTTTCGAAGAATTTCACACGGGGGATAGAAT
GCTTTTACATTGTTTTTAATAGTTAGTTATTATATCCAATGCGTTTCAAA
GCGaaggctagaagcgaatcttcaatctttcccAATCAAGAAAAAGCGGA
GCCAATCTAgtactttattttgttttcgtttttaacatttttcaaaattt
gcaatAGTAATGCTTTCAAGCAAGTAGTTTTAGATTATATTAACCTATCC
TACCTGTATATATGTTAACTTGACCATGGGATGTGACCaaactttctatg
tttttttAATCTGGACGATCTTTATGTGAAAATTTGTTAACGCTCTAACA
GAGTTACTTGGACTTGGACATTActtattttataatttattaacaaaatc
tttcaTTGTCTTGTCTTATATAAATACCCGTGAAAACTTTTTAACCGTTG
TTTTCGCCCCTTGTTTGTACTATAGTTTGTAATATTTTTATGTTGTACAT
ATAACAAtgtatatttgaattttttttgagatatTTATCTTACGAAACAT
TTACGcttctgcaatattttttttacttgagaATTTTAAAACTGACTGTT
AAAACTATACTGCTGACAACCAGTACCTCATAGAACTGTAACtgaaaaaa
cataaaacaaaaaccATCTTTGAAATAAGACAGTTTCTGACCACACCCGT
TTGATTTGACAACACAATACCATACAACATGCTATTCCGATCTTAGAGTA
TGTACAACATGCCTAGTTTCAGCCTCGAAAATTACTTGAATGAATAAACC
ATAATTTTGGCAAAACTGTTTCAGCTCTcattatttttaagaaaatgttc
TATTGAAAACTAAATTTGAACCAATAAATTAGAACGAAAATTGGGAAGTT
TAAACACATTAGATATTATGGAATAATTCGttacaattttttgaaatttt
aatacaaaggaatttaaaaaaagaaaattacacAAAACTTTTTAACAGTT
CAgcttgtatgcttataaattcTCCTTCCCCAAATCTCAGCTATAATCTC
ACTGATTATAattgttatgcttataaatgtgTTTTTGGTTCTCCAGTCTT
CAAAGAACACAGTTTTTCATACCtactttttatttaatttgaacaaattc
TGAATCGCCCCTAAATACAGAGACACGTTCTTCGACGTTTTAACATTTTA
ACAGAGGTTTTATTTAACAAAGTTCATGGTCTAATGAGGTTACTTTATTG
ACAGCAGACTTTGACTTTAACGATATTTAGATCAAGAATTACTTAACGTG
AATAACTTTGTttaaaatactaattttttttcagcttATCCGAGATTTCT
AAATATATGTATTAGATTTTCAAGGGATTTTCAACTCACTGACATTCCCA
GAAGGAATGCTTAAGAACTGTGACTTTTACTAATTTCGAGTCTCCAAAGA
CGCAATAACTTAATCAaaacgattttttataagaacagactatataagaa
cataaggcttcgatggccaaaatgttaagtacaagttaagaacattttta
ggctttaagaaaaaacttcaaaaattttggatgttcttattaaaaaaacc
gTGTATTTCAATAAAACGTTTACTCTATCTATTTTAGCTGACAAAGATTT
CAAGAATGCTGTCTTACGTACGCATAACCAATTACGTAAGCATCACGGCT
CAGGCCCACTACGTTGGAACAGTTCTCTGGCTAGCCAAGCGTTAAGTGCG
GCACAAGAGGCGGCTGAAACCAACACTCTACGCTCAGTGGATAACAACAA
AGTGGGTCAAAATATGGCAGCGATTTCCGGAGCTGAATTAACGGGTGAAA
AAGTTTCCAACATGTGGTATGATgaggaaaagaaatataattATAGAGAA
GCCAAATTCAGTTCAAGTACAGGTAAtgagcttttttataagaatcagta
aaCTTTGACTGGCCctcctttgttcttatttttctttatctttatctTGA
AGTACAGTGGAGTGTCTTTAACATAAACACGCACAAGGAACACTTTTTCG
AGtaatggaaatttcaaattatggAGTAAGGCTAAGGCATtagctgaagg
gaccataaaaattgttcgagataaggagacattcgagttaaggagacatt
cgagttatggaggtttGAATTAAAGAGACTTAACTTAATTCTTGAATACA
GTGGAACCTGTCTAAAGCGGAAATTGTATAAAGCGGATATTTTTTTAGGA
CGGGTACTTTCACACTCTCCTTGAGACGGTATATTTTAAGGTCAATCTCT
CGTGAAAGGTTTTGACATGGCTGGAAAGATTCTACATACTTTTAAGGTTA
AAGATATTTACCAAAACTGTAttgaaatatttcttcttttgtATTTCCAG
GAAGTTTCACACAACTTGTTTGGAAAGGGACAACCGATCTTGGTGTGGGT
AGAGCTTTCGGACCTAACGGACAAACGTATGTTGTAGCTTTATACCAACC
AGCGGGAAATGTTAGAGGACTTTACAGTGAAAACGTTTTACAATCACGTG
GTACGAGGCCTGGGTCCAAGAAAGAGGATCAAGGGTGTGGCTGTGCCATC
ATGTAACACCTTCCAAATCAAAGATAATCTGATGTTTTGCTGACTaatag
gaaaaattattttcaaaatggggACAGCTAAAAGTATGGCGATTCCTTCA
AATGACAATCGCCTTAAGTAGGCGTTCACTTTAAATGGCGGATAGCTGCC
aaaagtttacttgaaatagaCGGCCATGATAGATATCGTTAAGAAAATAT
GATATTCTTTGAATTTGGGTAGAACAAAGTTCATTTTTGATGAATATTCT
GAAGACTGTCAAATAACTCGACTCTCAAGGTTGATTTAACCGGCAGGGAA
ACGTTTTTCTAGCGTTACTTTGGCTAAGGGACTAAACTTGCTTGATTTAT
CCTTTTTTTTATCCACCATTATTGCTATGAACTGTATATGTATATCCAAA
TGTCAGAAAATTTTACAAACGATCTAAAATTTTATGCTGGttcttaaaaa
tttagtttAGTTTTATGCATACAGTATAaccttttctttgaaaattcatt
aatattaataaaattgaaaacattttttgatttatgatttgaTTTATAAA
TTAACGGCTAATTTTATAGCTAATGTTCTTAAGTCTGataatttttgtag
atattaTGATTTTTTCCGGAGAAAGTTAATTTTCACGGAAcctttttgta
tattttatttataGTTGATGATTTTTTGGGATAATAAATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00014398-exon-sc0000187-1491911889:426530..426915 | TCONS_00014398-exon-sc0000187-1491911889:426530..426915 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1510915933:426530..426915 | TCONS_00014398-exon-sc0000187-1510915933:426530..426915 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1575043694:426530..426915 | TCONS_00014398-exon-sc0000187-1575043694:426530..426915 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1491911889:441036..441334 | TCONS_00014398-exon-sc0000187-1491911889:441036..441334 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1510915933:441036..441334 | TCONS_00014398-exon-sc0000187-1510915933:441036..441334 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1575043694:441036..441334 | TCONS_00014398-exon-sc0000187-1575043694:441036..441334 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1491911889:441771..442008 | TCONS_00014398-exon-sc0000187-1491911889:441771..442008 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1510915933:441771..442008 | TCONS_00014398-exon-sc0000187-1510915933:441771..442008 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1575043694:441771..442008 | TCONS_00014398-exon-sc0000187-1575043694:441771..442008 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1491911889:443967..444251 | TCONS_00014398-exon-sc0000187-1491911889:443967..444251 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1510915933:443967..444251 | TCONS_00014398-exon-sc0000187-1510915933:443967..444251 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1575043694:443967..444251 | TCONS_00014398-exon-sc0000187-1575043694:443967..444251 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1491911889:444730..445621 | TCONS_00014398-exon-sc0000187-1491911889:444730..445621 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1510915933:444730..445621 | TCONS_00014398-exon-sc0000187-1510915933:444730..445621 | Clytia hemisphaerica | exon |
TCONS_00014398-exon-sc0000187-1575043694:444730..445621 | TCONS_00014398-exon-sc0000187-1575043694:444730..445621 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000187 | supercontig | sc0000187:426530..445621 + |
Blast
BLAST of TCONS_00014398 vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3) HSP 1 Score: 121.324 bits (303), Expect = 2.502e-31 Identity = 63/147 (42.86%), Postives = 90/147 (61.22%), Query Frame = 2
Query: 386 AMADFKNDILKTHNTYRKTHRSNPLKWSNKLQANAQRWADKLAKKGYLQHENQSDEG---ENIACMKGAELTGERAATMWYDEVKYYDYSKPTFSSKTGHFTQLVWNGSTELGVGRATASNGMQFVVARYNPPGNIL--GKFPDNVF 811
A F N++LK HN YR+ H PLK L AQ++++ LA L+H +S G EN+A + TG+ A WY E+K Y++ +P F+S TGHFT +VW + ++GVG+A+AS+G FVVARY P GN++ G F +NV
Sbjct: 5 ASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLA-WASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVL 150 HSP 2 Score: 102.834 bits (255), Expect = 8.611e-25 Identity = 60/152 (39.47%), Postives = 89/152 (58.55%), Query Frame = 2
Query: 917 KQTDKDFKNAVLRTHNQLRKHHGSGPLRWNXXXXXXXXXXXXXXXXTNTLR---SVDNNKVGQNMAAISGAELTGEKVSNMWYDEEKKYNYREAKFSSSTGSFTQLVWKGTTDLGVGRAFGPNGQTYVVALYQPAGNV--RGLYSENVLQSR 1357
K K F N VL+ HN+ R+ HG PL+ +L +A ++ A T L+ + G+N+A S + TG++V++ WY E K YN+++ F+S TG FT +VWK T +GVG+A +G ++VVA Y PAGNV G + ENVL +
Sbjct: 3 KSASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLPPK 153
The following BLAST results are available for this feature:
|