TCONS_00014320 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014320
Unique NameTCONS_00014320
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014320 ID=TCONS_00014320|Name=TCONS_00014320|organism=Clytia hemisphaerica|type=transcript|length=142bp
ACAATGCAATGGAACGGAGACGAAGAATCGCTTATAATGTTCAAGTTCAG
AATTGCATGGCTTTGCAATATCGTGTGAGGCGCTATGCAATGCATTGGCT
TCGTGTCACTCAAAAATCACGTgcaagaaacaaagaaaatat
Run BLAST on NCBI

transcript from alignment at sc0000185:288509..288823-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014320 ID=TCONS_00014320|Name=TCONS_00014320|organism=Clytia hemisphaerica|type=transcript|length=315bp|location=Sequence derived from alignment at sc0000185:288509..288823- (Clytia hemisphaerica)
ACAATGCAATGGAACGGAGACGAAGAATCGCTTATAATGTTCAAGTTCAG
GTGAGGTTATTTTTTTATTTGATTGCCAACTTCAATTACCGGTTATTTTT
TATTCATACTTGATCATTCTTTCTACTTTAAGGGCAGAAACTTTCTTTAA
AAAAGACATCCTTAAGTACGGCACATGTCATCTGGAATCATTTCAAGACA
GCAGAATATTTTGTGTTTTATAGAATTGCATGGCTTTGCAATATCGTGTG
AGGCGCTATGCAATGCATTGGCTTCGTGTCACTCAAAAATCACGTGCAAG
AAACAAAGAAAATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008006XLOC_008006Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014320-exon-sc0000185-1575043694:288774..288823TCONS_00014320-exon-sc0000185-1575043694:288774..288823Clytia hemisphaericaexon
TCONS_00014320-exon-sc0000185-1575043694:288509..288600TCONS_00014320-exon-sc0000185-1575043694:288509..288600Clytia hemisphaericaexon
TCONS_00014320-exon-sc0000185-1510915933:288774..288823TCONS_00014320-exon-sc0000185-1510915933:288774..288823Clytia hemisphaericaexon
TCONS_00014320-exon-sc0000185-1510915933:288509..288600TCONS_00014320-exon-sc0000185-1510915933:288509..288600Clytia hemisphaericaexon
TCONS_00014320-exon-sc0000185-1491911889:288774..288823TCONS_00014320-exon-sc0000185-1491911889:288774..288823Clytia hemisphaericaexon
TCONS_00014320-exon-sc0000185-1491911889:288509..288600TCONS_00014320-exon-sc0000185-1491911889:288509..288600Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000185supercontigsc0000185:288509..288823 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014320 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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