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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014285 ID=TCONS_00014285|Name=TCONS_00014285|organism=Clytia hemisphaerica|type=transcript|length=391bp
CCACCATACTGATAAATATATACATAGGTTGTATAGGTTTCAAAATTGAC
ACAAGACCAACTGATAAAATTTTTTACTTATTACAGACTGTATTGTAAAT
ATCCTTCTGACCCCTATCAAACAACATGATACTCATGACAGTGATGTTCT
TATACCAAGAATTCTATCTGACACTGGCAGATGAACAGTAATTCACAAGA
ATCAAATAACTCAATACTTGAAGGTGTTTCGAGAGTGGACTTTGTAACGA
TTTTTTCAAATGTAACTGGAGAGTCTTATTTAAAGACGTTATTGAGGAAT
ATCAGATCGAAGACTGTTGCACCATGAAGATATTCAATGATTGGGATGTC
ATGGCAGCTCGTCAAAAGCGGATATTACAGTCAAAATCAGG Run BLAST on NCBI transcript from alignment at sc0000185:200724..203471+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014285 ID=TCONS_00014285|Name=TCONS_00014285|organism=Clytia hemisphaerica|type=transcript|length=2748bp|location=Sequence derived from alignment at sc0000185:200724..203471+ (Clytia hemisphaerica)
CCACCATACTGATAAATATATACATAGGTTGTATAGGTTTCAAAATTGAC
ACAAGACCAACTGATAAAATTTTTTACTTATTACAGACTGTATTGTAAAT
ATCCTTCTGACCCCTATCAAACAACATGATACTCATGACAGTGATGTTCT
TATACCAAGAATTCTATCTGACACTGGCAGGTATTTCCATACTTATTTTT
TAATCTTCAGCCCTTACAATTACTATATACATACTTGATTGATTTAAGCC
TAAAGTATGAATCGAACCTTTTATTCAAATACCTaataaatttttgttgc
caAGTAAGTTAAATAAATTTACTTTTGTATCCAGATGAACAGTAATTCAC
AAGAATCAAATAACTCAATACTTGAAGGTAATAATTTGGTTTTAGAATTT
TCTCAGTTTATATTAAAGTAATTTTACTCCTgggattttttatttcttaa
taTTGATGacagtttaatattttggttttaaaatggTTTGTAGTGCATTA
TGCCATTAAGGTAATATTAATGAAGATCAGTTTTAATGAAAGAACGTTGG
AATTTTAGCATATGGTCCTGAAAGAAGTGATTTTCATTGGGAATGATTGG
GGCAAAATGAATCTTTGTATAATGAGGGTAAGCTATCCAATGACCCAATA
AATCTTATGCCTTTGTATTGTACAAAACAAACATAATTAATCATCAATTA
TCAATTAATATTTGAAGTCACATTCACAACGCATTTCATATTTACTTTTG
TTAGTAGTAGGTTTAGATCAGCGAATTTGATCAAAACTAGAGTTTCAAAG
TATTATTTAGGGTATTTCtgcattgaaaaaaagtttccacTTTACTTTTT
GCAGAAGCTTCCATTATTGCATCAGATATTTCAATACTGTTGTACCGGTG
TAGTAAtttatttatagaagtgtatttcgcaggtctattgagAGGTtcta
tgaaacaattttacatctttacaatttatagatcttatcattccattcgt
ttgtcaattctgTTATAGAGTTTTACAGTTAGGCACTTGCGCCTCTAACC
CACTCTTCTTACAATCATGTTGTTTCCGTCGTAAATTTCGTTAAATAGAG
TTTAGTCCTAggactacctctcactttccatatataactcttgtcttttt
atttcgatgttttttcttttgctttatgaTGCCATTGTTTTATTATCTCG
CGTTCTTTCCTTGAATCCTTTCTTCTTCACTCTCGAGAGTAACTTTTAAT
GGTTTCTATCGTTCATTTGTATATATTTCATCTTTACGAGCACCTATGCG
TTCTACCTTGATTATCGTCACATCGAAACCCATTTGttgtttcattattt
tttctataaaatctttGTCACCAACTCGTTGCTCTTCTTCGTTATCGTGC
TTGTTTTCACCTAAATCATGCACCATGATGTTGCACTTGCTTGGTTGATT
TGAGCTAGCGCTCCTCTTCGTTCACTgatttgatgaaactttttatggtc
acctcttgtttttttagatcttttttggtgacttctgcatatgattgttt
ttttgtttctgtaTTGTTGAGCTGTGTTTCAGATCGTTTGTTGTTCCGTT
CTTTGTTGACGTCGTTTTTATTCATTAGCTTCTCGACTTTCCTTTCTAGA
GAGGTTATTCTCTCGTTGAAACCTAATTTCAGTCCATGATGCTCATCTTT
ATCTGCTTCTTTCGTTGTGATGTTACTGTGAGCTTTTTGTCTGCTTGTTT
TAATCCTCTCAAGTAAGAGTGGCNGATGTTACTGCGAGCTTTTTGTCTGC
TTGTTTTAATCCTCTCAAGTAAGAGTGGCGTTATTGTAACACAATTTCCA
CATTCGAAGCGCCGGCTTTTGTATTGCAGACATAGCTGAATCTGATAGGC
CGGGAGCTCAGAGCAAGCATAATGGACAAGTCTATCGCATCTCCTACATT
GTAAGGTGTCGTTATCTGCTATGATGGTGTTTGTTAAACAGTTATTGGGT
GTGCAATATCCATAATTTTGTTCAATttccttgttagaattttcgTTGAT
TTCCGCCATATTGTTGCATTTTCAGGATCGTGGCAGTCGTTATGCTGTGT
CTTTAAAATATGTATATCATACAATGCGTATCattctttccgtagaaaac
attgcgtcatgaatatcatgattAGAATTGTATATCCTTGGCTGAATAGG
GCTGAATACCTGGTGTGTTATTTTTCCTATGATGTTGTGCAAGACCTTCT
TCGCCAAACTATTGTTAAAGAGTCTTATGGGACGATAACGCATTTGTTGG
TGGGGGGGGGGACAAATGTTGCAGATAGCTACAAATAATCAATGCAAAGA
TGCAATTTCATATGTCATGCCATTGAAGAAATTTATTGTACACGAGGAAA
ACCTTGCATATGTAGTCTTTGAATTTGCGtaagatttttcgaaaaaaaat
taattttgtaaatatttaaaACACGTCTTAATTTGGAAAATACCCTCTGT
AGTATTTTTTTATGTAAGTTTAAATCATATAGATATACTCGGAATACGTC
AACTTTGGTTGTTCTATTTTAAAAATGTAGGTGTTTCGAGAGTGGACTTT
GTAACGATTTTTTCAAATGTAACTGGAGAGTCTTATTTAAAGACGTTATT
GAGGAATATCAGATCGAAGACTGTTGCACCATGAAGATATTCAATGATTG
GGATGTCATGGCAGCTCGTCAAAAGCGGATATTACAGTCAAAATCAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014285-exon-sc0000185-1491911889:200724..200903 | TCONS_00014285-exon-sc0000185-1491911889:200724..200903 | Clytia hemisphaerica | exon |
| TCONS_00014285-exon-sc0000185-1510915933:200724..200903 | TCONS_00014285-exon-sc0000185-1510915933:200724..200903 | Clytia hemisphaerica | exon |
| TCONS_00014285-exon-sc0000185-1575043694:200724..200903 | TCONS_00014285-exon-sc0000185-1575043694:200724..200903 | Clytia hemisphaerica | exon |
| TCONS_00014285-exon-sc0000185-1491911889:201058..201100 | TCONS_00014285-exon-sc0000185-1491911889:201058..201100 | Clytia hemisphaerica | exon |
| TCONS_00014285-exon-sc0000185-1510915933:201058..201100 | TCONS_00014285-exon-sc0000185-1510915933:201058..201100 | Clytia hemisphaerica | exon |
| TCONS_00014285-exon-sc0000185-1575043694:201058..201100 | TCONS_00014285-exon-sc0000185-1575043694:201058..201100 | Clytia hemisphaerica | exon |
| TCONS_00014285-exon-sc0000185-1491911889:203304..203471 | TCONS_00014285-exon-sc0000185-1491911889:203304..203471 | Clytia hemisphaerica | exon |
| TCONS_00014285-exon-sc0000185-1510915933:203304..203471 | TCONS_00014285-exon-sc0000185-1510915933:203304..203471 | Clytia hemisphaerica | exon |
| TCONS_00014285-exon-sc0000185-1575043694:203304..203471 | TCONS_00014285-exon-sc0000185-1575043694:203304..203471 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000185 | supercontig | sc0000185:200724..203471 + |
Blast
The following BLAST results are available for this feature:
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