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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014273 ID=TCONS_00014273|Name=TCONS_00014273|organism=Clytia hemisphaerica|type=transcript|length=271bp
CAGTTTCTAAACCCACACTGGATGGCTATCACCCACTTGAAGCCAAAAGT
GGGAAAAGTCAAAATGCAGGTGTTGGATTGTacatcaaaaataatttgaa
ctACAAAGGAAGAAATGACTTGAcaatttcatcatcagGTCAGACTCTGA
ACCATGTCAATGAAGCTAAATACCTTGGAGTAATCATTGATCATAAACTG
AGCTGGAGAGAACATCTCAAGAGACTGCACACAAGAATTAAGCAGAATAT
AGGTATTCTTCACAAAGTTGG Run BLAST on NCBI transcript from alignment at sc0000185:13930..17058+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014273 ID=TCONS_00014273|Name=TCONS_00014273|organism=Clytia hemisphaerica|type=transcript|length=3129bp|location=Sequence derived from alignment at sc0000185:13930..17058+ (Clytia hemisphaerica)
CAGTTTCTAAACCCACACTGGATGGCTATCACCCACTTGAAGCCAAAAGT
GGGAAAAGTCAAAATGCAGGTGTTGGATTGTacatcaaaaataatttgaa
ctACAAAGGAAGAAATGACTTGAcaatttcatcatcaggtaaGAACTCTG
ATTTTGAGTGTCTCTTTATAGAACTTGACAGTAAGATTCTTGTCGTTGTT
TATAGACATCCAAATAGTGACATTCTGAAGTTCACCAATGAATTTGAATC
TTCTATCTTACAAAAAATcagcaaagaaaacaaaaagactGTCATTATGG
GAGATTTCAATATTAATTTAATGAACTGGAATCCCACCGTCCTACAAACA
CTTTTTTTGATACAATGATGTCTAGTTGTCTTCTTCCTTATATTGTTCAA
CCAACAAGATTTAATGAAACTTCTCACACACTCATCgataatatttttta
caatGACATATCCAATGAATGCATCAGTGGTAACCTTATTCCACACATCA
CTGATCATTTACCCAACTTTTTATTTGTGCCTCACCATAAACAAACTATt
caaaaaactagaaaaaagagaagagatttttccaaatttaacaTCAAAGA
CTTCAGAggagatttttcaaacattgaCTTTGTTAACATCTTTCAAAGTG
CAACGAATATTAACCAAATGTACAACTTTTTTCACACAGGTCTTaattta
ctttttgacatgcatgTACCAATCAAATCTCCATCCAAACAACAacttaa
aaaggaaaaaagtccTTGGATGACTCCAGCAATgttggaaaaaacaaaaa
ttaagaactGCCTATATGGTAAATGGATGCAGGAGAAAGATCCACTGGTT
CATAGAGAGTACAAGCTTCTATTGCATGAAATCAACAAAGATAttcgcaa
acaaaaatttatctatcttaagaacaaatttatCCTGTCGAAAAACAATA
TCAAGAAATTCTGGAAGAACATCAAGTCTTTTCTTggtaaagataaaaaa
aaccattttccaaATTCCATGAATCTTCAAAAGGATATTCTACACAGGAT
CTCATCAAATATTGGAAGGGTTCAATAAATACTTCTCTGAAGTGGCACCC
AACCctcttaaaaaaatttccaagcaTCATAATCTAAATTcttatctaaa
aaaattaattataacaACTCCAGCTTCTTTTTTCGACCAACAAACGATTA
TGAGGTGCTTACACATTTGAATAATCTTAACTCAAAGAAGGCCAAGGACA
TTTACAATTTCCCCATAAACATCATCAAAGGTACTGCTGATTTAATTTCC
AATCCACTTGCAATACTAATCAACAAATCTCTGTCCACAGGTGTCTTCCC
GGAACTTCTGAAACATGCAAAAGTTACACCTCTTTTTAAAAGTGGGAATA
AGACGGATATAAAAAACTACAGACCGATATCAGTccttccattattcgat
aagaTCTTTGAGAAAATTGTCCATGAGAGAATTACTTAATTTCTAGACAA
gaacaaaattttatttgatggtCAATATGGTTCCAGAAAGGTAAGTCTAC
CTCTTGTGCAATCCTACATCTCACAAATTTTATCTACAAAtgcaaaaaaa
caaagagaCTGGTTGTGCAATCCTTCTCGATCTGGCAAAAGCCTTTGATA
CAgttaaccctacctactgagagctaTTTGGGTCCCTTAGAACTGAAAGG
GGGGGGGCACATAGTGGATAACTTAGGATAGGAACATTAtttggtcatga
aatttggtacagcaatGTTTAAACCTATACtaaataaatttatcaaaaat
tttttttacaaattgaatgcaatttttaatgacgtcatcaattgtatcaa
ctattggcaaaaatcaccaaaaaaactcaaaaaaaaagatgtttcttaaa
attgctaTTGAAACAGATGGAGAAACACACTCTCCttcaatttactttta
tttgaaagcttttacaatgtactaaatggaaattaaaatctaaatcaaca
attttgtcgTGACATTCTACTATAGCGCGCCAAAaccgaagaaaatgttt
taaactttcaaaaccgcgtaaaatcagaacatttcaactttttcaagtcg
gtgatacttttttttgtcatatttatatttattttttgctgctAATTCTC
CTGTAAGATGGAATAGAAGCAATACAAAAGAAATAGACAATTAAAGTATA
CCTGGTAACATGTTATAGTATCTTGGAGTAAGcacataaaaaagagcaaa
atagcCTGCGCTGCAGTTGCGGGATGGTAGTGGTCACCGACAAACCTGTC
ATTGGGACTAAAGTaattgaccaatgaaaaaaattttttaaccaaaacat
tccccataaaatttgatgaaaagtcataagtcactagttaaaaaatgcca
gccaattttctaacagggggggggggcacaaagtgccccccccccccccg
gaggtAGGGTTAATCATGCAATActgctaaaaaaaaaaaaaaaaaaagaa
aaaaaaaaaaaaaccccccccttttttaaagggggggggggggcacaaag
tgccccccccctctcagtaggtagggttaatCATGCAATACTgctaaaaa
aaatcgaaaaaattggAACAAGGGGTCCTGTTCTATCATGGTTTCGAAGT
TATCTTGCAAACAGAAAACAAAGCGTCTACTGCAACGACGCTAATTCAAC
ACCCTTACCCATGTTTCACGGGGTCCCCCAAGGTTCAGTGCTTGGTCCCC
TTCTTTTCTTGATTTATATTAATGACCTGCCATTGAATTCATCATTCTCG
CAGACGTTTTTTGCTGACGATACGTGTCTTTTTATGAGTCATAAAAACCC
TGAAGCTCTTCAAAATCTTATTAATGTTGAGGTTGGCAAGATTTCAGACT
GGCTAGGAGCTAATCAACTTACTATAAATATATCTAAATCCTACTATATG
ATTTTCAGTGAGCacaaacaaactaatttcaaCATTTCTATTTCAGGTCA
GACTCTGAACCATGTCAATGAAGCTAAATACCTTGGAGTAATCATTGATC
ATAAACTGAGCTGGAGAGAACATCTCAAGAGACTGCACACAAGAATTAAG
CAGAATATAGGTATTCTTCACAAAGTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014273-exon-sc0000185-1491911889:13930..14067 | TCONS_00014273-exon-sc0000185-1491911889:13930..14067 | Clytia hemisphaerica | exon |
| TCONS_00014273-exon-sc0000185-1510915933:13930..14067 | TCONS_00014273-exon-sc0000185-1510915933:13930..14067 | Clytia hemisphaerica | exon |
| TCONS_00014273-exon-sc0000185-1575043694:13930..14067 | TCONS_00014273-exon-sc0000185-1575043694:13930..14067 | Clytia hemisphaerica | exon |
| TCONS_00014273-exon-sc0000185-1491911889:16926..17058 | TCONS_00014273-exon-sc0000185-1491911889:16926..17058 | Clytia hemisphaerica | exon |
| TCONS_00014273-exon-sc0000185-1510915933:16926..17058 | TCONS_00014273-exon-sc0000185-1510915933:16926..17058 | Clytia hemisphaerica | exon |
| TCONS_00014273-exon-sc0000185-1575043694:16926..17058 | TCONS_00014273-exon-sc0000185-1575043694:16926..17058 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000185 | supercontig | sc0000185:13930..17058 + |
Blast
The following BLAST results are available for this feature:
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