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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014256 ID=TCONS_00014256|Name=TCONS_00014256|organism=Clytia hemisphaerica|type=transcript|length=877bp
CATTTACATAAGGTTTATATAAGGTTCCTATGCGACAAATTCTAGAAACA
GCCTTGTGTGTTGTATATATCCATGACGAGACAAGTTATAGATCGACATC
CAACTGCGACCTTGACTAAACTTTATGCCAGTTTATGTCATATCCCACCA
CCTCCTACAGGGTAATCCATATCTCGTTTGGTTAACAATACATATTGTCT
ATGCCTCTGGTTCCGCTTCTGTATTCCGCGAATCAAGCACGCTGCCATTG
TAATACAACCTAGAGATAAAGCAGCATACAATGTCACTATCATTGCAAAC
TTTTTACTATATTTTGAACGCCCTCGAAAATAGGGTGCAATGTTTATAAC
TTCCAAAATCATATTCGAAGTTGTGTTATTTGTGGTATTGTTCCCATTGT
TTTCTAGAGTGAAATCTCCGTTCAGTGATACTGTTGGTGAAATGTTATCC
AAAGTGTTCTCAAGTGTTTTGAAAGTTTCGTTTTGACCGAGTTTAAAAGA
CAATGTTGTCGTAGGAGCGACTGTTGGTCGGTTTTGACGAGTTCTTGCAG
GTTCGATGAACGTCAGATTAGCAACTGGGACTGCCATGTTTTTCCAAGAA
TTCGTTTTCTTCTTATGATGTGTCTTTTTACGAATCACTGATGGTGAGAA
ACGCCCTTCAATGTCGTAAACGAACAAAAGGAGACCCAAAAGGGTCAAAA
TTAAACGCATAATGTCAACCTTCACTCTTCAAATTCTCGATACAAAACCT
CTATAGCAAATCTTCATTGTTATAAAAAACTCAAACAAAGCAAAAGCAAA
TTTTCTAGAACATTTAAAACCTCGTTGATCAAGTGTTTGATATTTTACTT
ACTTTCTGTATTCCATTTTCGAAACTG Run BLAST on NCBI protein sequence of TCONS_00014256-protein >TCONS_00014256-protein ID=TCONS_00014256-protein|Name=TCONS_00014256-protein|organism=Clytia hemisphaerica|type=polypeptide|length=190bp
MRLILTLLGLLLFVYDIEGRFSPSVIRKKTHHKKKTNSWKNMAVPVANLT
FIEPARTRQNRPTVAPTTTLSFKLGQNETFKTLENTLDNISPTVSLNGDF
TLENNGNNTTNNTTSNMILEVINIAPYFRGRSKYSKKFAMIVTLYAALSL
GCITMAACLIRGIQKRNQRHRQYVLLTKRDMDYPVGGGGI Run BLAST on NCBI transcript from alignment at sc0000183:85210..86086 Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014256 ID=TCONS_00014256|Name=TCONS_00014256|organism=Clytia hemisphaerica|type=transcript|length=877bp|location=Sequence derived from alignment at sc0000183:85210..86086 (Clytia hemisphaerica)
CAGTTTCGAAAATGGAATACAGAAAGTAAGTAAAATATCAAACACTTGAT
CAACGAGGTTTTAAATGTTCTAGAAAATTTGCTTTTGCTTTGTTTGAGTT
TTTTATAACAATGAAGATTTGCTATAGAGGTTTTGTATCGAGAATTTGAA
GAGTGAAGGTTGACATTATGCGTTTAATTTTGACCCTTTTGGGTCTCCTT
TTGTTCGTTTACGACATTGAAGGGCGTTTCTCACCATCAGTGATTCGTAA
AAAGACACATCATAAGAAGAAAACGAATTCTTGGAAAAACATGGCAGTCC
CAGTTGCTAATCTGACGTTCATCGAACCTGCAAGAACTCGTCAAAACCGA
CCAACAGTCGCTCCTACGACAACATTGTCTTTTAAACTCGGTCAAAACGA
AACTTTCAAAACACTTGAGAACACTTTGGATAACATTTCACCAACAGTAT
CACTGAACGGAGATTTCACTCTAGAAAACAATGGGAACAATACCACAAAT
AACACAACTTCGAATATGATTTTGGAAGTTATAAACATTGCACCCTATTT
TCGAGGGCGTTCAAAATATAGTAAAAAGTTTGCAATGATAGTGACATTGT
ATGCTGCTTTATCTCTAGGTTGTATTACAATGGCAGCGTGCTTGATTCGC
GGAATACAGAAGCGGAACCAGAGGCATAGACAATATGTATTGTTAACCAA
ACGAGATATGGATTACCCTGTAGGAGGTGGTGGGATATGACATAAACTGG
CATAAAGTTTAGTCAAGGTCGCAGTTGGATGTCGATCTATAACTTGTCTC
GTCATGGATATATACAACACACAAGGCTGTTTCTAGAATTTGTCGCATAG
GAACCTTATATAAACCTTATGTAAATG Coding sequence (CDS) from alignment at sc0000183:85210..86086 >TCONS_00014256 ID=TCONS_00014256|Name=TCONS_00014256|organism=Clytia hemisphaerica|type=CDS|length=573bp|location=Sequence derived from alignment at sc0000183:85210..86086 (Clytia hemisphaerica)
ATGCGTTTAATTTTGACCCTTTTGGGTCTCCTTTTGTTCGTTTACGACAT
TGAAGGGCGTTTCTCACCATCAGTGATTCGTAAAAAGACACATCATAAGA
AGAAAACGAATTCTTGGAAAAACATGGCAGTCCCAGTTGCTAATCTGACG
TTCATCGAACCTGCAAGAACTCGTCAAAACCGACCAACAGTCGCTCCTAC
GACAACATTGTCTTTTAAACTCGGTCAAAACGAAACTTTCAAAACACTTG
AGAACACTTTGGATAACATTTCACCAACAGTATCACTGAACGGAGATTTC
ACTCTAGAAAACAATGGGAACAATACCACAAATAACACAACTTCGAATAT
GATTTTGGAAGTTATAAACATTGCACCCTATTTTCGAGGGCGTTCAAAAT
ATAGTAAAAAGTTTGCAATGATAGTGACATTGTATGCTGCTTTATCTCTA
GGTTGTATTACAATGGCAGCGTGCTTGATTCGCGGAATACAGAAGCGGAA
CCAGAGGCATAGACAATATGTATTGTTAACCAAACGAGATATGGATTACC
CTGTAGGAGGTGGTGGGATATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014256-exon-sc0000183-1491911889:85210..86086 | TCONS_00014256-exon-sc0000183-1491911889:85210..86086 | Clytia hemisphaerica | exon |
| TCONS_00014256-exon-sc0000183-1510915933:85210..86086 | TCONS_00014256-exon-sc0000183-1510915933:85210..86086 | Clytia hemisphaerica | exon |
| TCONS_00014256-exon-sc0000183-1575043694:85210..86086 | TCONS_00014256-exon-sc0000183-1575043694:85210..86086 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000183 | supercontig | sc0000183:85210..86086 . |
Blast
The following BLAST results are available for this feature:
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