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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014159 ID=TCONS_00014159|Name=TCONS_00014159|organism=Clytia hemisphaerica|type=transcript|length=1651bp
AAATGATTCCAATTTATTTGCAATTTCGGAAAACAAGGATCAGACAAGAA
AATTTGTTGATCATATTGATTTTGATGTGTCATAGTGAACGATAATGGTG
TATTTAATCTTTCTTCGTAAAGTGTATACAGTGTACAAACGTGTACGGCT
TACATATATGTGCACTAAATAGAAAAATACATAAATGAAATAATTGTGCG
AGTAGtgtagttttgatttttatcctAATAAAATACGTTGAGGTTAAGCC
AACTAAAAAGTCTAAAGACTCNGTAGtgtagttttgatttttatcctAAT
AAAATACGTTGAGGTTAAGGCAACTAAAAAGTCTAAAGACTTGGGGACAC
GATCCCACccacctgaaacgctttctcgtgtctccaccccattttttaaa
aataacatttgtgtttctctcacttttgtccctggcaCAAATTTAGgata
tttccctcactttttgccccatgaaacaaaaaaagaaaccatgagacacg
caatttttttcttgttttggtgggatggagcatgttgcattgcacaaCGC
TAAAACAACTTCTCGTGTCCGCAAGCCTTTAGGATCAGTAAAATTCagtt
tcaaaatctaaaaaattaaagCAAGGGAATTTTACATTTCAAAAGATTCA
ACTAGGAATTTCCTTAATCACAAGGACAGTACTAAAGatttaaaatggct
taaaatgcaaaaattatttcaggATATAGAATGAACGGAATTCGGAGCTA
TAAAATGCTTGCAGAACAGAACAGAACAGAACAGCGAAAAAAAAAGCGaa
taataaattcaaaaattaaatgaatGGTTGTCGTATCTCAGTTCTGAGCT
TGAAACCATTTCATAGTCgcgaaaaaaaatgtcaaaaattaaaatctaat
ctACTGCAGTTAAAAAacattgttataaaaaaaacaaataaaataaataa
aaaacgaaaccaaaaagaacaaaaatgtcaaaaaaattataaaatgacaa
aaaaaaaacaatgaaaaaattaaaaaccaaaattattgataaaaagataA
TACTGCTAAATGTTATAAAAGTAGTCAAAGAActtcaaaattcttgaaat
accGGACCGTCTTAAGCAGGCAAAAAGACACGAAAGAGGATCTTTAAAGA
AAGTCTCCTTTGGTTTATGTCAGAAATGTTCTTATCCGATGTTATCTCGA
ACAACCACGTGATCAGTCACGTGGATTGAACGCATGAATCGTGATATCCA
TGACGAAATGTTTTAAGCACCGAAAATAGCCCGGGCGTTTGCCACTTATT
TTTTATTGTTTAAATTCAAATTTAAAGGTTTTATTTTTAAATAAGTCTTT
CCATTTCATATCAGACACAAATTTCATATAAGGACAGTGTCTTCCTATTG
TTATATTATGCTGATATAAGCAAAAAATGTTTTTCTTTACTCTTTCTTAC
TAATCTTGCTCCACATCCGTGTCAATTCAATATAAAAAAGCTTGTGAATC
AAAATTGATGAGTAAGCAAACGATCTCACTCTTATTTAAAAACAAAACCT
TTATTGGTAAACACCCGGTCTTTCTATTGATGCTTCCGTGTATAAAATTA
CGTCATGAATATCATGAATAGAGTGGTGTCAAGTTATTTGAAACATGTTA
T Run BLAST on NCBI transcript from alignment at sc0000181:202583..204233 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014159 ID=TCONS_00014159|Name=TCONS_00014159|organism=Clytia hemisphaerica|type=transcript|length=1651bp|location=Sequence derived from alignment at sc0000181:202583..204233 (Clytia hemisphaerica)
ATAACATGTTTCAAATAACTTGACACCACTCTATTCATGATATTCATGAC
GTAATTTTATACACGGAAGCATCAATAGAAAGACCGGGTGTTTACCAATA
AAGGTTTTGTTTTTAAATAAGAGTGAGATCGTTTGCTTACTCATCAATTT
TGATTCACAAGCTTTTTTATATTGAATTGACACGGATGTGGAGCAAGATT
AGTAAGAAAGAGTAAAGAAAAACATTTTTTGCTTATATCAGCATAATATA
ACAATAGGAAGACACTGTCCTTATATGAAATTTGTGTCTGATATGAAATG
GAAAGACTTATTTAAAAATAAAACCTTTAAATTTGAATTTAAACAATAAA
AAATAAGTGGCAAACGCCCGGGCTATTTTCGGTGCTTAAAACATTTCGTC
ATGGATATCACGATTCATGCGTTCAATCCACGTGACTGATCACGTGGTTG
TTCGAGATAACATCGGATAAGAACATTTCTGACATAAACCAAAGGAGACT
TTCTTTAAAGATCCTCTTTCGTGTCTTTTTGCCTGCTTAAGACGGTCCgg
tatttcaagaattttgaagTTCTTTGACTACTTTTATAACATTTAGCAGT
ATtatctttttatcaataattttggtttttaattttttcattgttttttt
tttgtcattttataatttttttgacatttttgttctttttggtttcgttt
tttatttattttatttgttttttttataacaatgtTTTTTAACTGCAGTa
gattagattttaatttttgacattttttttcgcGACTATGAAATGGTTTC
AAGCTCAGAACTGAGATACGACAACCattcatttaatttttgaatttatt
attCGCTTTTTTTTTCGCTGTTCTGTTCTGTTCTGTTCTGCAAGCATTTT
ATAGCTCCGAATTCCGTTCATTCTATATcctgaaataatttttgcatttt
aagccattttaaatCTTTAGTACTGTCCTTGTGATTAAGGAAATTCCTAG
TTGAATCTTTTGAAATGTAAAATTCCCTTGctttaattttttagattttg
aaactGAATTTTACTGATCCTAAAGGCTTGCGGACACGAGAAGTTGTTTT
AGCGttgtgcaatgcaacatgctccatcccaccaaaacaagaaaaaaatt
gcgtgtctcatggtttctttttttgtttcatggggcaaaaagtgagggaa
atatcCTAAATTTGtgccagggacaaaagtgagagaaacacaaatgttat
ttttaaaaaatggggtggagacacgagaaagcgtttcaggtggGTGGGAT
CGTGTCCCCAAGTCTTTAGACTTTTTAGTTGCCTTAACCTCAACGTATTT
TATTaggataaaaatcaaaactacaCTACNGAGTCTTTAGACTTTTTAGT
TGGCTTAACCTCAACGTATTTTATTaggataaaaatcaaaactacaCTAC
TCGCACAATTATTTCATTTATGTATTTTTCTATTTAGTGCACATATATGT
AAGCCGTACACGTTTGTACACTGTATACACTTTACGAAGAAAGATTAAAT
ACACCATTATCGTTCACTATGACACATCAAAATCAATATGATCAACAAAT
TTTCTTGTCTGATCCTTGTTTTCCGAAATTGCAAATAAATTGGAATCATT
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014159-exon-sc0000181-1491911889:202583..204233 | TCONS_00014159-exon-sc0000181-1491911889:202583..204233 | Clytia hemisphaerica | exon |
| TCONS_00014159-exon-sc0000181-1510915933:202583..204233 | TCONS_00014159-exon-sc0000181-1510915933:202583..204233 | Clytia hemisphaerica | exon |
| TCONS_00014159-exon-sc0000181-1575043694:202583..204233 | TCONS_00014159-exon-sc0000181-1575043694:202583..204233 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000181 | supercontig | sc0000181:202583..204233 . |
Blast
The following BLAST results are available for this feature:
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