|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00014112 ID=TCONS_00014112|Name=TCONS_00014112|organism=Clytia hemisphaerica|type=transcript|length=329bp
GTCCCGTGCCAAAGAGACTTGAATGACTAATTTTTTGACAGAcgaagaaa
ttgaaaacaaatttgacGATACTTTCTCTTGGAGAAGatcaaaaaaagaa
taaaaatggAATCAACAATGAAGTTATTTTATATGTTTGTATTGTTTATG
ACTATTGTCAGTTTGACTCAGGGGCGTCACCTCCGAAAGAACAAGTCTCG
ACAATTTACTGGCATGCTAGCCTCACCTGAAGTTGTTGttcaagaaaaga
aagaagccaaaaaaatttcatccagTTTGTCAAGCCTCAAATTGAACAAA
GTACCACACCGAATTTACTTAGCAGGtat Run BLAST on NCBI transcript from alignment at sc0000181:330084..332557+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00014112 ID=TCONS_00014112|Name=TCONS_00014112|organism=Clytia hemisphaerica|type=transcript|length=2474bp|location=Sequence derived from alignment at sc0000181:330084..332557+ (Clytia hemisphaerica)
GTCCCGTGCCAAAGAGACTTGAATGACTAATTTTTTGACAGGTATAATAA
AcgagtattttcatttttttggagTGAGTTGTAGCTACTTGTATTTACTA
CAGTTTTTCACTACAAAGACTTTTATTGTTTGTTTCGAAGAATGTACATT
TGAGACTGTTTTACGCTCTTTCAACTGGCTCAACTCACTGCACAGTATAA
CGCTTTTAAAGATTCTTAATCTAAGGCTTTCCTAGGctaggctttaaact
caacgTAAATTTAACATACATACTTTTTGTAGAAGTCTCGAGCATCGCTT
CCAGATAACTGACAATACGCGCATGTAAAAAACTCCCGAAAAAGCTCAGT
TGCCAAAGTAtttgatggtgatattcttaaagaataattttatattttgt
ggCCCATGTCATGTTTGACATTATTTTATGGAGttgatttatataaaaaa
aagcgtgtatggaTATCCAGGCATTCACATCAGGCATCAGTAggctcgtt
ggaaagatattgtgAAATACCGGAATACCCCGCCCCTGTCTTTTCTTTAT
GAGGAGAATGGaattctttcaaatttcaatattttcgagGATACGATTTA
TGCTAGTGAAGTCATTCAGTTTTGACACGGTATTCAAGTGCTGCAATTTC
CTCACGTTGTGCTTACATATAGAAAACCATTCAATTTCTCAAAGGTGAAC
CTATGGCCTTGCTTTTGGAATCACGGATCTCGTTTTTAAATAGATTTGCG
AAAGTGACACAGTTTTCAAATTTCCGTTACCGTTAAATACAACTATCGTC
TATGGCGTAGATACTTCGTTAGTCAGAGGAAATTAtattaacttttttct
tgaCAAAATGAATTAAAGATAAAAATGTAGCAGTTTCTTGTCCTTTCcct
gtttgacgtcaaaaactaACTAAAGGACTTCATGGACAATCAAGGCATAA
TGTTCTGAGTAAATATCAATGATGGAATGGTAGGTTAAACTTCAGCAAAG
ATTGGGTCTCGTGTTTCCTTGACTCGCCCATTTGATGCAATAACAGACGT
TTATTTGGTCTATTCTCAATACTTCTTTGAAAGTGGTACTACTTTCTGTT
CTGAAAGTATTTTCTTCTGAAAGCTGGCGCTGGGTTCTCTTCTTAAAGCT
ACTCTTATAGAAGACATAGGTATCTTTGACTAATCGAGTCCCCATCATAT
ttaaagagaaagagaaagagaaaaacaatttttggttAATAGAGCTTTTA
GCTAATTAAGGACACTTTTTAATATTGCTTTTTTAGAAGAGTAATACCAT
GAAGCCTGTTGGTTGTATCTCTATGTATTTCTTTATCACAAATTATTAAA
AAGGAtcaagaaattctttttttaaaagtaaGGATCAAAACTTTATTGAC
AATAAGATGATAGAGTTTCATGTCTTGCAGAGTAGCTCTGTGCACTGTAT
GTAACTATGTTGTGTTTTGAATACAGTTAACATTGTTGtaaaatgatgaa
ttttcttttttgggttTAGCTGAGTTTCATGATTTTTCtctgtgtttttc
atttgttggTTGTTTTCACAGCTCTGTACATTTTATGAATCTAGAACTTG
TTGGAccgtaaatatttttgaatatgtTTTCTGTGATTTTAAACTGAAAT
TTTATTGTAGTATTTTTGACATTTAGCCTTTAACCTTGATGGCGTTCTCC
CTTGTTTTATCTTGTCTTATCTAAAGCTTCATAATTCTGTTCTATTAATT
TCTGATTTCAGAACGAGGCCCTAGATAACAAGGGTAATGACATCTCCTAC
GACTTCTTATCTGTAATTGAAGAAGTTCTCAGTAAGGCTCGTTATTTATC
TTCGAAAAAGAATGAACTCACTCTCAATACCATTGCTCGGGATCGGCTGT
AATGATTGGAAATGTTTTCAAGAGGGCTTCGAACGTTTTTGGACAACTAT
tcttgatatgcataagtcaacattacgtcatttttcatatcgGGAACACA
CGAAAAACCTGAATTTGACCCCATGCGTTGCTATTTTTAGTAGCACTTTT
GGGTCAAATTCTggtgtttccgatagggaaAATAACGTAATCTTTCTTGA
TTTACGCTTATCATGGATCTCGTCTCATTTTAGTCTGAAATCGTGTCAAA
AACATTTATTCAATACTTCATTCCTTCAATTTTCAGAcgaagaaattgaa
aacaaatttgacGATACTTTCTCTTGGAGAAGatcaaaaaaagaataaaa
atggAATCAACAATGAAGTTATTTTATATGTTTGTATTGTTTATGACTAT
TGTCAGTTTGACTCAGGGGCGTCACCTCCGAAAGAACAAGTCTCGACAAT
TTACTGGCATGCTAGCCTCACCTGAAGTTGTTGttcaagaaaagaaagaa
gccaaaaaaatttcatccagTTTGTCAAGCCTCAAATTGAACAAAGTACC
ACACCGAATTTACTTAGCAGGtat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00014112-exon-sc0000181-1491911889:330084..330124 | TCONS_00014112-exon-sc0000181-1491911889:330084..330124 | Clytia hemisphaerica | exon |
| TCONS_00014112-exon-sc0000181-1510915933:330084..330124 | TCONS_00014112-exon-sc0000181-1510915933:330084..330124 | Clytia hemisphaerica | exon |
| TCONS_00014112-exon-sc0000181-1575043694:330084..330124 | TCONS_00014112-exon-sc0000181-1575043694:330084..330124 | Clytia hemisphaerica | exon |
| TCONS_00014112-exon-sc0000181-1491911889:332270..332557 | TCONS_00014112-exon-sc0000181-1491911889:332270..332557 | Clytia hemisphaerica | exon |
| TCONS_00014112-exon-sc0000181-1510915933:332270..332557 | TCONS_00014112-exon-sc0000181-1510915933:332270..332557 | Clytia hemisphaerica | exon |
| TCONS_00014112-exon-sc0000181-1575043694:332270..332557 | TCONS_00014112-exon-sc0000181-1575043694:332270..332557 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000181 | supercontig | sc0000181:330084..332557 + |
Blast
The following BLAST results are available for this feature:
|
