TCONS_00013941 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013941
Unique NameTCONS_00013941
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length144

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013941 ID=TCONS_00013941|Name=TCONS_00013941|organism=Clytia hemisphaerica|type=transcript|length=144bp
gcctatttctataaaatataatttcttcTTTGTGCATACCAATTATGATG
TCACATAATTTGTCTCTTGTGAATTGCGTGTTTCATAAAAGTGACAGTCA
TTAAAGCAATCACGCGACACTCCCCACCATGAAACAATcgtcaa
Run BLAST on NCBI

transcript from alignment at sc0000174:514567..514710

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013941 ID=TCONS_00013941|Name=TCONS_00013941|organism=Clytia hemisphaerica|type=transcript|length=144bp|location=Sequence derived from alignment at sc0000174:514567..514710 (Clytia hemisphaerica)
ttgacgATTGTTTCATGGTGGGGAGTGTCGCGTGATTGCTTTAATGACTG
TCACTTTTATGAAACACGCAATTCACAAGAGACAAATTATGTGACATCAT
AATTGGTATGCACAAAgaagaaattatattttatagaaataggc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007795XLOC_007795Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013941-exon-sc0000174-1491911889:514567..514710TCONS_00013941-exon-sc0000174-1491911889:514567..514710Clytia hemisphaericaexon
TCONS_00013941-exon-sc0000174-1510915933:514567..514710TCONS_00013941-exon-sc0000174-1510915933:514567..514710Clytia hemisphaericaexon
TCONS_00013941-exon-sc0000174-1575043694:514567..514710TCONS_00013941-exon-sc0000174-1575043694:514567..514710Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000174supercontigsc0000174:514567..514710 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013941 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top