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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013864 ID=TCONS_00013864|Name=TCONS_00013864|organism=Clytia hemisphaerica|type=transcript|length=688bp
CCTGAAAGAGCTTTTGTACGAGAGGAATTGATGTTAATACCTGAAGATAC
TGAATTACCTCCTGAACGAGTGAAAGAGTGGTGACTAAATGAGTTTAGGC
ATTTTAAAAACATAGCGACAATTTCTCGGTCTGATATATTGCCTATAGGA
GAGAAGCCCACACTCTCCCTTGGGAGGCTAAAAAATCCACACGACGCATT
CGTAAACTTAGACAGCGCTTTAGATACCGTTGTAAGATCTAGAAAGCCTA
AAGCTGCTCAGATTTTTGTATGATTTATTAAGATCATACAAAAAGATTTA
CTATATTTTTAATGCGGATATTTGTCGTACGAAACAGATGGATTTTGTAA
TAATCCACATTTTACACAAAAAGTTTGATCTCCATCTACTGCAAAACTGA
GTGCTGACTAATAACATACCAATTTTCGTGTTGCACTAGCTAAGAGTCTT
TCGTTATAGGTTTGCTCGTCAATTTTTTGCTGaataaattgttcttttaa
acaCGCGTCACATTTGTTTTCCTCGATAAATTTAGCCTCTTTTTCTAGTt
caattagtttttttctgagaTCGTTCGGTTTCATTTTTCTGATTTGCGCG
ATTTCAGCCGCTTTAGCTTTGTGATTTGGATATCCAACGAATTCCAAACA
CATTTTTATGAGCTCTGGTTTATTAACATTCAGATTCA Run BLAST on NCBI transcript from alignment at sc0000174:7139..9868- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013864 ID=TCONS_00013864|Name=TCONS_00013864|organism=Clytia hemisphaerica|type=transcript|length=2730bp|location=Sequence derived from alignment at sc0000174:7139..9868- (Clytia hemisphaerica)
CCTGAAAGAGCTTTTGTACGAGAGGAATTGATGTTAATACCTGAAGATAC
TGAATTACCTCCTGAACGAGTGAAAGAGTGGTGACTAAATGAGTTTAGGC
ATTATGAAGACCAAGATTGGGTATATGCGTATCCTGGTTTGCTTGAAGCT
ATAGGCGTTGCTTTGTATTTTTAAGCAAAATTTTATGACTAAAGTTAAAT
TTCAAGTGAGGCTTGACCGAAAAAGCACACTGCTAGATGTGATATAAAAC
AGGGGGACGGCCGCAGTCCTCTCGGAGGTGGTAAAAATCCACACGATGCC
TTCGTTAATCTGGACGATTTTTAGGGATTGTAGATGTAAGGCATAATTTC
AAAGACATAGCGACAGTTTTTCGATCTGATATATTGCCTGTTGTAGGAGG
GGGGCGGAGTACGGCCCTCGGGAGGCTAAAAAACACACATGATGCATTCG
TAAACTTAGACAGTGCTTTAAAAATTGTTGTAAGATCTAAAAAGCCAAAA
GCTTGAAATTTTGAAAAAATAATTTTTCAAAAATTTGATAAATGGTAAAC
TATATATCAAAAAAAGACTGCTGGTGTTATCAAGAACCATTGTAGTCAAG
AAAACTACGCTCACAAGTGTCAGACCCAACTAAACACAGTTTTACTGAAA
GAAGCGAGCCTTTATTGCTTTCTTATATAATTGCTCAGATTTTTGTATGA
TTTATTAAGATCATACAAAAAGATTTACTATATTTTTAATGCGGATATTT
GTCGTACGAAACAGATGGATTTTGTAATACTCCACATTTTACACAAAAAG
TTTGATCTCCATTTACTGCAAGGTCTGAGTGCTGACAGTAATAACATACC
AATTTTCGTGTTGCACTAGCTAAGAGTCCTTCGTCATATATTTTTTGNGG
AAAGGCCCTTCGCGAATGGATTTTCAGAGATATAATTCCTCGAGGATTTA
AAAAATTAATAGAAGAAAAAGACGGCCAACTCGCCCTTCTGAACGACGAC
TTAACTAATGTAAAACAAAACGTCGTAGCTCTGGAGCAAGATAATCTCGA
GCTCCAAGCCCTTGTTGCTCGACGATCTGTGCCTTATCTCGATAATGAAA
CACGCAACAATGGTATCGTAGTCATCCAAAAGAATAACGGCGACTCTTAT
CCGTACATAGCTATATGTGGACAGCAAGGCTATGTTGCTCAAAAAATTCA
AAACAAACTGACGGATTATCCTAGCGGTCAGATAATTGTGTTAGCCGAAA
CCCCAAATGCAATCATTCACTACAACTGGTTANATTTATTTCAGGGTAGA
TGCTCAAAGTAGTAAGTTGAGACTTGTAATATAAAATAAAGATGGGCGAT
GAGATTGAACTTAAAAACTTGTTGGACTCTGTTCCACCAGAATATAAGAA
AACAAGGGGTGAATTAGGGATAGAAGATCGAAATCCATCTGAACTATTTA
TTGGAATTAGAGGCTTAAACTGGATGTTGAAAAACACTTCGAATAGAGAC
TTGCGTCAACGAATTATGACCGTTAAAAAAGCATTAGCTGTTGTTGAAAC
GAGTGTTTAAATGGTAAAATAAGTTGTATGATTTATTTTACCTAAAGCTT
TGCAAGTTAGACTTAGAAAATGTAAATAAAGATGTCTNTAAACATTTATT
TTCACTTTTTAACGCTGTACCATCTGGAGCTATTGAGGTTCAAAATGACG
AGGACGATAAACCTTGGTTTAAGAGAGCTCACGTAGGTTCATATCTTGGA
ATTAAGCGCATAATAACATCATTAGATAATCTTGATAAACGTGAACAGCG
CGCTAGATCTGAGTTTAAAATGCAGTCCGTACTACGGACTGCATATCCAA
GAGTACAAGATACAGATGTTTTCTTATCTGTTTATGGTGTTATGCATGTA
ATCGTAAACAGCAAANCGTGGCACGGACTGCATATCCAAGAGTGCAAGAT
ACGGATGTTTTCTTATCTGTTTATGGGGGGGAGTGAGAAGTTCAAGTGAG
TTAAATAATTCACTTGACCGAAAAAGCTTTGCAAGTTAGACTTAGAAAAT
GTAAATAAAGATGTCTATTACNATGTTAATACCTGAAGATACTGAATTAC
CTCCTGAACGAGTGAAAGAGTGGTGACTAAATGAGTTTAGGCATTTTAAA
AACATAGCGACAATTTCTCGGTCTGATATATTGCCTATAGGAGAGAAGCC
CACACTCTCCCTTGGGAGGCTAAAAAATCCACACGACGCATTCGTAAACT
TAGACAGCGCTTTAGATACCGTTGTAAGATCTAGAAAGCCTAAAGCTGCT
CAGATTTTTGTATGATTTATTAAGATCATACAAAAAGATTTACTATATTT
TTAATGCGGATATTTGTCGTACGAAACAGATGGATTTTGTAATAATCCAC
ATTTTACACAAAAAGTTTGATCTCCATCTACTGCAAAACTGAGTGCTGAC
TAATAACATACCAATTTTCGTGTTGCACTAGCTAAGAGTCTTTCGTTATA
GGTTTGCTCGTCAATTTTTTGCTGAATAAATTGTTCTTTTAAACACGCGT
CACATTTGTTTTCCTCGATAAATTTAGCCTCTTTTTCTAGTTCAATTAGT
TTTTTTCTGAGATCGTTCGGTTTCATTTTTCTGATTTGCGCGATTTCAGC
CGCTTTAGCTTTGTGATTTGGATATCCAACGAATTCCAAACACATTTTTA
TGAGCTCTGGTTTATTAACATTCAGATTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013864-exon-sc0000174-1575043694:9771..9868 | TCONS_00013864-exon-sc0000174-1575043694:9771..9868 | Clytia hemisphaerica | exon |
| TCONS_00013864-exon-sc0000174-1575043694:7139..7728 | TCONS_00013864-exon-sc0000174-1575043694:7139..7728 | Clytia hemisphaerica | exon |
| TCONS_00013864-exon-sc0000174-1510915933:9771..9868 | TCONS_00013864-exon-sc0000174-1510915933:9771..9868 | Clytia hemisphaerica | exon |
| TCONS_00013864-exon-sc0000174-1510915933:7139..7728 | TCONS_00013864-exon-sc0000174-1510915933:7139..7728 | Clytia hemisphaerica | exon |
| TCONS_00013864-exon-sc0000174-1491911889:9771..9868 | TCONS_00013864-exon-sc0000174-1491911889:9771..9868 | Clytia hemisphaerica | exon |
| TCONS_00013864-exon-sc0000174-1491911889:7139..7728 | TCONS_00013864-exon-sc0000174-1491911889:7139..7728 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000174 | supercontig | sc0000174:7139..9868 - |
Blast
The following BLAST results are available for this feature:
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