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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013849 ID=TCONS_00013849|Name=TCONS_00013849|organism=Clytia hemisphaerica|type=transcript|length=1213bp
GATAATTACAATCTACAGTGATGATAAAGTTTGACAAGGGTATATTCTAG
TCCATCTGAACTTAGcataagttaaaaaataaacaaactttttcaccTGG
TAAGCATTTTTGACAAGCTCCTCCATCAATGCTGAAGGTACCTTCAACAC
ATTCTCTACATTTCTCTGTTAAAGCATCTTTTTGAAACCCTGGTGAACAG
GCATTTGATGAAACGGCTCCACAAAAGCAACAAAGCACCAATAATGCTAC
ATAGATTTTTCCTTGAACTatcattttgttattctttaatcattcctttt
tattttatagcaagttaaaaaaacacaagaaaatgaGAAGACAGCTACCA
TAGTTAGTAATGTTTGAGATGTCATAGCATAGCAAGTATTACATGCAAAC
TTCAAGTtgccaaaaacccaaaaaggagaaagaaaaaaaattataaacat
ggtttcagccccccccTATAGATTTCTAAAGAGCATCTAAGCCAATAAGG
AGTTGGGGACTGAAATTCAGATACCCTAAAAAGCATATCATTTTCAGCTA
ATATTCACTAGTTGGGTTCATCTTTTCTGATCCTGGTTTGGAATGAAAGT
TGACATCCTGACAGCGCTCGGAACAATGGCTTCGCTTACAGACTCAACAA
TTCACCTGAGCAATTGACGATGCTGCAGTTCCAGGTGAtgctttctttta
ttttcttcttcaaatttcGTGTTCCTGAATCTTTCAATTGACGTTGACAC
TTGGAATCAGCGTTTCCCAATCAATTCAAGCTTGATGATGTCAAGCAAAT
GTTGACTGTGATCAGCCAGCATTGTCCATCATTTTGAACTTATGATGACT
TGTTTGAGATGAGTCTCTCTAGAAACAATTTGTGATATCCAACAATTCGT
GATTTCCAACAATTTGTGATGTCCAACAATTCGTGATGATCAACAATACG
TGATTGAGTTGTTACGTGAATCCGTAGCAATGTGCTTCTTAAATCTTATG
TTGAGTGTTTGATTACATACTATGAGCTGAGTATGATGATAAACTGATTA
CGCACATGAACTGATACCTGAGCTCAACGCCTCAGTGTTGATTTACAAAT
TATGAACAGATACGTACTATATACTACGTTCGATGATACATTTGATGAAC
CTTTGACAGACACGCCCTTGAATGACGATTGTTTCATGGTACTTACTATA
TACTACGTTCGAT Run BLAST on NCBI transcript from alignment at sc0000174:510151..511541+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013849 ID=TCONS_00013849|Name=TCONS_00013849|organism=Clytia hemisphaerica|type=transcript|length=1391bp|location=Sequence derived from alignment at sc0000174:510151..511541+ (Clytia hemisphaerica)
GATAATTACAATCTACAGTGATGATAAAGTTTGACAAGGGTATATTCTAG
TCCATCTGAACTTAGcataagttaaaaaataaacaaactttttcaccTGG
TAAGCATTTTTGACAAGCTCCTCCATCAATGCTGAAGGTACCTTCAACAC
ATTCTCTACATTTCTCTGTTAAAGCATCTTTTTGAAACCCTGGTGAACAG
GCATTTGATGAAACGGCTCCACAAAAGCAACAAAGCACCAATAATGCTAC
ATAGATTTTTCCTTGAACTatcattttgttattctttaatcattcctttt
tattttatagcaagttaaaaaaacacaagaaaatgaGAATACAGACAGCT
ACCATAGTTAGTAATGTTTGAGATGTCATAGCATAGCAAGTATTACATGC
AAACTTCAAGTtgccaaaaacccaaaaaggagaaagaaaaaaaattataa
acatggtttcagccccccccccacctATAGATTTCTAAANaaaaaaacac
aagaaaatgaGAATACAGACAGCTACCATAGTTAGTAATGTTTGAGATGT
CATAGCATAGCAAGTATTACATGCAAACTTCAAGTtgccaaaaacccaaa
aaggagaaagaaaaaaaattataaacatggtttcagccccccccTATAGA
TTTCTAAAGAGCATCTAAGCCAATAAGGAGTTGGGGACTGAAATTCAGAT
ACCCTAAAAAGCATATCATTTTCAGCTAATATTCACTAGTTGGGTTCATC
TTTTCTGATCCTGGTTTGGAATGAAAGTTGACATCCTGACAGCGCTCGGA
ACAATGGCTTCGCTTACAGACTCAACAATTCACCTGAGCAATTGACGATG
CTGCAGTTCCAGGTGAtgctttcttttattttcttcttcaaatttcGTGT
TCCTGAATCTTTCAATTGACGTTGACACTTGGAATCAGCGTTTCCCAATC
AATTCAAGCTTGATGATGTCAAGCAAATGTTGACTGTGATCAGCCAGCAT
TGTCCATCATTTTGAACTTATGATGACTTGTTTGAGATGAGTCTCTCTAG
AAACAATTTGTGATATCCAACAATTCGTGATTTCCAACAATTTGTGATGT
CCAACAATTCGTGATGATCAACAATACGTGATTGAGTTGTTACGTGAATC
CGTAGCAATGTGCTTCTTAAATCTTATGTTGAGTGTTTGATTACATACTA
TGAGCTGAGTATGATGATAAACTGATTACGCACATGAACTGATACCTGAG
CTCAACGCCTCAGTGTTGATTTACAAATTATGAACAGATACGTACTATAT
ACTACGTTCGATGATACATTTGATGAACCTTTGACAGACACGCCCTTGAA
TGACGATTGTTTCATGGTACTTACTATATACTACGTTCGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013849-exon-sc0000174-1491911889:510151..510488 | TCONS_00013849-exon-sc0000174-1491911889:510151..510488 | Clytia hemisphaerica | exon |
| TCONS_00013849-exon-sc0000174-1510915933:510151..510488 | TCONS_00013849-exon-sc0000174-1510915933:510151..510488 | Clytia hemisphaerica | exon |
| TCONS_00013849-exon-sc0000174-1575043694:510151..510488 | TCONS_00013849-exon-sc0000174-1575043694:510151..510488 | Clytia hemisphaerica | exon |
| TCONS_00013849-exon-sc0000174-1491911889:510667..511541 | TCONS_00013849-exon-sc0000174-1491911889:510667..511541 | Clytia hemisphaerica | exon |
| TCONS_00013849-exon-sc0000174-1510915933:510667..511541 | TCONS_00013849-exon-sc0000174-1510915933:510667..511541 | Clytia hemisphaerica | exon |
| TCONS_00013849-exon-sc0000174-1575043694:510667..511541 | TCONS_00013849-exon-sc0000174-1575043694:510667..511541 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000174 | supercontig | sc0000174:510151..511541 + |
Blast
The following BLAST results are available for this feature:
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