TCONS_00013656 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013656
Unique NameTCONS_00013656
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1815

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013656 ID=TCONS_00013656|Name=TCONS_00013656|organism=Clytia hemisphaerica|type=transcript|length=1815bp
TAGAGACTTTCCGATCAAATGAAATAATTCCACTCAAACATCTCGTATCA
ATTATGGAAGATAAACTGAAAGAAAGCGATCTGGCAATGAATGCTTCCac
tagaaaaaatttcaaaagagatCTACAAACACAAGCACCATCTCTTAAAT
TCCTAGATTCTGGGAATGAGATCTATGTTTACAGCAAATCTGCCTCAATC
GAAGATATTATGCTTAAATATATCAAAGCTAAGGAGGAAAACGACCAATT
GAAGAACGAACAGCAGAATGAGGAAGAACAATTCATTAAATGCTTTGCAA
TTTTACGAAAGGAAGTTAAACAGCTGAATGATACAATGCCTTGGCCACCG
CAACCAGAAGACCTAACTCCGGATAAGGTTGTCATTCCACCAATGCTGAA
CATGGCCCTCTCAACACTTTTGAAAAGTAAAGATGGCACATTGACAGAAA
AAGCCGAACGGTTGAAGATGTCTATTGCACAAGATATCATCTATGCAGTG
ACTCAAGGGAGAGTCAAGACCCCGAAAAGCATCCTGCTCCCAAGTATTGT
TAAAGCGTTAACGAACAACACTGAGATCATCACATCACTAAACAAACTAG
GACATGGTATTGCTTACACGCAACTCATGGAAATTCAAACGGAAAACGCT
TACATGATTGTTGATAAACAGAAAGAGAATGGCACTTCCTCTTCNGTTAA
AGCGTTAACGAACAACACTGAGATCATCACATCACTAAACAAACTAGGAC
ATGGTATTGCTTACACGCAACTCATGGAAATTCAAACGGAAAACGCTTAC
ATGATTGTTGATAAACAGAAAGAGAATGGCACTTTGCTTCTTAATGCGTT
GAAGGAGATTTTTAGCTTATACGTCGCTGACAACATTGATAGAAATGAAG
AAACTCTAACAGGCACTGGAACTACACATAAAGTTAACAATCTATTAatc
caaatgaaaaaaaaccctNTTAACAATCTACTAatccaaatgaaaaaaaa
cccgTCAAATGTGACGACACCACCTCTACCAGAACCGTCTCGTTATCGGA
GGCAGAAACGAGTatcatttgaaattcaagatgATGATAATCAGGCCGTT
ATCGTTTTCGGAGGAAAAAGGAAAGATccagaaaatcgaaaatttcctGA
AAATCCATTCAAAGACTGGCTGTTTGCTGACAGAGAGAAATCTAACTTTA
TCTGGGCTCTCCTGCGTCGAGACTACTCTCCACGACAGATTATCCCAAGC
TGGTCTGGCTTCAACATCTCCATCCAAGACGGGATTCCTGTAATGAAATC
GTCTATCGAATATCTTAATTGTATAAACAAACCAGCAACCGAGAAATCAA
CTATACATCAGGTTCTCTCACGAGCTTTGGAGATGATTGCATCTTTGAAG
CTAAAATCAATTGTTTGCGTATTCGACCAAGCGATTTATTGCAAAGCATG
CGAGATCAAATGGAGAGAGCCAGAGAAGTTTCGTAATTGTGTGCTGATGA
TGGGCATGTTTCATATGATCATGACGTACATGCATATCCTGTCCAAACGG
TTTGCTGATGGTGGACTGAAAGACGCCCTTATCCAAAGTTCAGTCATTGC
TGAAGGTTCTGTTGACTCAGCCTTGCGTGGTAAAAGCTACAACCGAGGTG
TACGGATGTATAAGCTGTTTTATGAAGCCCTCCAGCGCCTTCTAATTGAC
CAATTGGTGGAAAGTGGAAAGTGTGGTCGAGTTGATGAGGCTTGCAATGA
ATTGGTCTTGGACAAGATCGACAAACAAATCTACGATACCATAGACGCAG
ATACATGTATCGAGG
Run BLAST on NCBI

protein sequence of TCONS_00013656-protein

>TCONS_00013656-protein ID=TCONS_00013656-protein|Name=TCONS_00013656-protein|organism=Clytia hemisphaerica|type=polypeptide|length=604bp
ETFRSNEIIPLKHLVSIMEDKLKESDLAMNASTRKNFKRDLQTQAPSLKF
LDSGNEIYVYSKSASIEDIMLKYIKAKEENDQLKNEQQNEEEQFIKCFAI
LRKEVKQLNDTMPWPPQPEDLTPDKVVIPPMLNMALSTLLKSKDGTLTEK
AERLKMSIAQDIIYAVTQGRVKTPKSILLPSIVKALTNNTEIITSLNKLG
HGIAYTQLMEIQTENAYMIVDKQKENGTSSXVKALTNNTEIITSLNKLGH
GIAYTQLMEIQTENAYMIVDKQKENGTLLLNALKEIFSLYVADNIDRNEE
TLTGTGTTHKVNNLLIQMKKNPXNNLLIQMKKNPSNVTTPPLPEPSRYRR
QKRVSFEIQDDDNQAVIVFGGKRKDPENRKFPENPFKDWLFADREKSNFI
WALLRRDYSPRQIIPSWSGFNISIQDGIPVMKSSIEYLNCINKPATEKST
IHQVLSRALEMIASLKLKSIVCVFDQAIYCKACEIKWREPEKFRNCVLMM
GMFHMIMTYMHILSKRFADGGLKDALIQSSVIAEGSVDSALRGKSYNRGV
RMYKLFYEALQRLLIDQLVESGKCGRVDEACNELVLDKIDKQIYDTIDAD
TCIE
Run BLAST on NCBI

transcript from alignment at sc0000171:6043..8307+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013656 ID=TCONS_00013656|Name=TCONS_00013656|organism=Clytia hemisphaerica|type=transcript|length=2265bp|location=Sequence derived from alignment at sc0000171:6043..8307+ (Clytia hemisphaerica)
TAGAGACTTTCCGATCAAATGAAATAATTCCACTCAAACATCTCGTATCA
ATTATGGAAGATAAACTGAAAGAAAGCGATCTGGCAATGAATGCTTCCac
tagaaaaaatttcaaaagagatCTACAAACACAAGCACCATCTCTTAAAT
TCCTAGATTCTGGGAATGAGATCTATGTTTACAGCAAATCTGCCTCAATC
GAAGATATTATGCTTAAATATATCAAAGCTAAGGAGGAAAACGACCAATT
GAAGAACGAACAGCAGAATGAGGAAGAACAATTCATTAAATGCTTTGCAA
TTTTACGAAAGGAAGTTAAACAGCTGAATGATACAATGCCTTGGCCACCG
CAACCAGAAGACCTAACTCCGGATAAGGTTGTCATTCCACCAATGCTGAA
CATGGCCCTCTCAACACTTTTGAAAAGTAAAGATGGCACATTGACAGAAA
AAGCCGAACGGTTGAAGATGTCTATTGCACAAGATATCATCTATGCAGTG
ACTCAAGGTATGAGAATTCCTGTTTTAATAGACATTTGAATCGCTTAGTA
GGGTTTATGTATATTTCATCTTGGGGCCTGGGTGATCATACGATTGCTAT
TTGAAAAGCATTTTCCGTCTGAGATGAGaattcttattttaaccatggaa
ttattttttaccttagGGAGAGTCAAGACCCCGAAAAGCATCCTGCTCCC
AAGTATTGTTAAAGCGTTAACGAACAACACTGAGATCATCACATCACTAA
ACAAACTAGGACATGGTATTGCTTACACGCAACTCATGGAAATTCAAACG
GAAAACGCTTACATGATTGTTGATAAACAGAAAGAGAATGGCACTTCCTC
TTCNGTTAAAGCGTTAACGAACAACACTGAGATCATCACATCACTAAACA
AACTAGGACATGGTATTGCTTACACGCAACTCATGGAAATTCAAACGGAA
AACGCTTACATGATTGTTGATAAACAGAAAGAGAATGGCACTTTGCTTCT
TAATGCGTTGAAGGAGATTTTTAGCTTATACGTCGCTGACAACATTGATA
GAAATGAAGAAACTCTAACAGGTATAATTTCTGCcaaaatttgcaatatt
tcaTTCTCCAAGTCCAAAAAGAAATCccaatttcatccccatttaaaTTA
TCTAAACGATAAAAATTGCTCATCTCTCTTTCTTAGGCACTGGAACTACA
CATAAAGTTAACAATCTATTAatccaaatgaaaaaaaaccctNTTAACAA
TCTACTAatccaaatgaaaaaaaacccgTCAAATGTGACGACACCACCTC
TACCAGAACCGTCTCGTTATCGGAGGCAGAAACGAGTatcatttgaaatt
caagatgATGATAATCAGGCCGTTATCGTTTTCGGAGGAAAAAGGAAAGA
TccagaaaatcgaaaatttcctGAAAATCCATTCAAAGACTGGCTGTTTG
CTGACAGAGAGAAATCTAACTTTATCTGGGCTCTCCTGCGTCGAGACTAC
TCTCCACGACAGATTATCCCAAGCTGGTCTGGCTTCAACATCTCCATCCA
AGACGGGATTCCTGTAATGAAATCGTCTATCGAATATCTTAATTGTATAA
ACAAACCAGCAACCGAGAAATCAACTATACATCAGGTTAGACTTCCATCT
ATTATGTCGTTAATTCGCTTGGATTAGTTTAAATATcaatatatttcata
tttaaaGAAATCAGGGTGATAAAACAGGTAACCGCTAATCTCGGGCTGGG
CAGTGATTGCGTAGATCATTAGATTATTTATGTCTCAAATTAACTTTTCT
TGTCTTATCAGGTTCTCTCACGAGCTTTGGAGATGATTGCATCTTTGAAG
CTAAAATCAATTGTTTGCGTATTCGACCAAGCGATTTATTGCAAAGCATG
CGAGATCAAATGGAGAGAGCCAGAGAAGTTTCGTAATTGTGTGCTGATGA
TGGGCATGTTTCATATGATCATGACGTACATGCATATCCTGTCCAAACGG
TTTGCTGATGGTGGACTGAAAGACGCCCTTATCCAAAGTTCAGTCATTGC
TGAAGGTTCTGTTGACTCAGCCTTGCGTGGTAAAAGCTACAACCGAGGTG
TACGGATGTATAAGCTGTTTTATGAAGCCCTCCAGCGCCTTCTAATTGAC
CAATTGGTGGAAAGTGGAAAGTGTGGTCGAGTTGATGAGGCTTGCAATGA
ATTGGTCTTGGACAAGATCGACAAACAAATCTACGATACCATAGACGCAG
ATACATGTATCGAGG

Coding sequence (CDS) from alignment at sc0000171:6043..8307+

>TCONS_00013656 ID=TCONS_00013656|Name=TCONS_00013656|organism=Clytia hemisphaerica|type=CDS|length=7248bp|location=Sequence derived from alignment at sc0000171:6043..8307+ (Clytia hemisphaerica)
GAGACTTTCCGATCAAATGAAATAATTCCACTCAAACATCTCGTATCAAT
TATGGAAGATAAACTGAAAGAAAGCGATCTGGCAATGAATGCTTCCacta
gaaaaaatttcaaaagagatCTACAAACACAAGCACCATCTCTTAAATTC
CTAGATTCTGGGAATGAGATCTATGTTTACAGCAAATCTGCCTCAATCGA
AGATATTATGCTTAAATATATCAAAGCTAAGGAGGAAAACGACCAATTGA
AGAACGAACAGCAGAATGAGGAAGAACAATTCATTAAATGCTTTGCAATT
TTACGAAAGGAAGTTAAACAGCTGAATGATACAATGCCTTGGCCACCGCA
ACCAGAAGACCTAACTCCGGATAAGGTTGTCATTCCACCAATGCTGAACA
TGGCCCTCTCAACACTTTTGAAAAGTAAAGATGGCACATTGACAGAAAAA
GCCGAACGGTTGAAGATGTCTATTGCACAAGATATCATCTATGCAGTGAC
TCAAGGGAGAGTCAAGACCCCGAAAAGCATCCTGCTCCCAAGTATTGTTA
AAGCGTTAACGAACAACACTGAGATCATCACATCACTAAACAAACTAGGA
CATGGTATTGCTTACACGCAACTCATGGAAATTCAAACGGAAAACGCTTA
CATGATTGTTGATAAACAGAAAGAGAATGGCACTTCCTCTTCNGTTAAAG
CGTTAACGAACAACACTGAGATCATCACATCACTAAACAAACTAGGACAT
GGTATTGCTTACACGCAACTCATGGAAATTCAAACGGAAAACGCTTACAT
GATTGTTGATAAACAGAAAGAGAATGGCACTTTGCTTCTTAATGCGTTGA
AGGAGATTTTTAGCTTATACGTCGCTGACAACATTGATAGAAATGAAGAA
ACTCTAACAGGCACTGGAACTACACATAAAGTTAACAATCTATTAatcca
aatgaaaaaaaaccctNTTAACAATCTACTAatccaaatgaaaaaaaacc
cgTCAAATGTGACGACACCACCTCTACCAGAACCGTCTCGTTATCGGAGG
CAGAAACGAGTatcatttgaaattcaagatgATGATAATCAGGCCGTTAT
CGTTTTCGGAGGAAAAAGGAAAGATccagaaaatcgaaaatttcctGAAA
ATCCATTCAAAGACTGGCTGTTTGCTGACAGAGAGAAATCTAACTTTATC
TGGGCTCTCCTGCGTCGAGACTACTCTCCACGACAGATTATCCCAAGCTG
GTCTGGCTTCAACATCTCCATCCAAGACGGGATTCCTGTAATGAAATCGT
CTATCGAATATCTTAATTGTATAAACAAACCAGCAACCGAGAAATCAACT
ATACATCAGGTTCTCTCACGAGCTTTGGAGATGATTGCATCTTTGAAGCT
AAAATCAATTGTTTGCGTATTCGACCAAGCGATTTATTGCAAAGCATGCG
AGATCAAATGGAGAGAGCCAGAGAAGTTTCGTAATTGTGTGCTGATGATG
GGCATGTTTCATATGATCATGACGTACATGCATATCCTGTCCAAACGGTT
TGCTGATGGTGGACTGAAAGACGCCCTTATCCAAAGTTCAGTCATTGCTG
AAGGTTCTGTTGACTCAGCCTTGCGTGGTAAAAGCTACAACCGAGGTGTA
CGGATGTATAAGCTGTTTTATGAAGCCCTCCAGCGCCTTCTAATTGACCA
ATTGGTGGAAAGTGGAAAGTGTGGTCGAGTTGATGAGGCTTGCAATGAAT
TGGTCTTGGACAAGATCGACAAACAAATCTACGATACCATAGACGCAGAT
ACATGTATCGAGGAGACTTTCCGATCAAATGAAATAATTCCACTCAAACA
TCTCGTATCAATTATGGAAGATAAACTGAAAGAAAGCGATCTGGCAATGA
ATGCTTCCactagaaaaaatttcaaaagagatCTACAAACACAAGCACCA
TCTCTTAAATTCCTAGATTCTGGGAATGAGATCTATGTTTACAGCAAATC
TGCCTCAATCGAAGATATTATGCTTAAATATATCAAAGCTAAGGAGGAAA
ACGACCAATTGAAGAACGAACAGCAGAATGAGGAAGAACAATTCATTAAA
TGCTTTGCAATTTTACGAAAGGAAGTTAAACAGCTGAATGATACAATGCC
TTGGCCACCGCAACCAGAAGACCTAACTCCGGATAAGGTTGTCATTCCAC
CAATGCTGAACATGGCCCTCTCAACACTTTTGAAAAGTAAAGATGGCACA
TTGACAGAAAAAGCCGAACGGTTGAAGATGTCTATTGCACAAGATATCAT
CTATGCAGTGACTCAAGGGAGAGTCAAGACCCCGAAAAGCATCCTGCTCC
CAAGTATTGTTAAAGCGTTAACGAACAACACTGAGATCATCACATCACTA
AACAAACTAGGACATGGTATTGCTTACACGCAACTCATGGAAATTCAAAC
GGAAAACGCTTACATGATTGTTGATAAACAGAAAGAGAATGGCACTTCCT
CTTCNGTTAAAGCGTTAACGAACAACACTGAGATCATCACATCACTAAAC
AAACTAGGACATGGTATTGCTTACACGCAACTCATGGAAATTCAAACGGA
AAACGCTTACATGATTGTTGATAAACAGAAAGAGAATGGCACTTTGCTTC
TTAATGCGTTGAAGGAGATTTTTAGCTTATACGTCGCTGACAACATTGAT
AGAAATGAAGAAACTCTAACAGGCACTGGAACTACACATAAAGTTAACAA
TCTATTAatccaaatgaaaaaaaaccctNTTAACAATCTACTAatccaaa
tgaaaaaaaacccgTCAAATGTGACGACACCACCTCTACCAGAACCGTCT
CGTTATCGGAGGCAGAAACGAGTatcatttgaaattcaagatgATGATAA
TCAGGCCGTTATCGTTTTCGGAGGAAAAAGGAAAGATccagaaaatcgaa
aatttcctGAAAATCCATTCAAAGACTGGCTGTTTGCTGACAGAGAGAAA
TCTAACTTTATCTGGGCTCTCCTGCGTCGAGACTACTCTCCACGACAGAT
TATCCCAAGCTGGTCTGGCTTCAACATCTCCATCCAAGACGGGATTCCTG
TAATGAAATCGTCTATCGAATATCTTAATTGTATAAACAAACCAGCAACC
GAGAAATCAACTATACATCAGGTTCTCTCACGAGCTTTGGAGATGATTGC
ATCTTTGAAGCTAAAATCAATTGTTTGCGTATTCGACCAAGCGATTTATT
GCAAAGCATGCGAGATCAAATGGAGAGAGCCAGAGAAGTTTCGTAATTGT
GTGCTGATGATGGGCATGTTTCATATGATCATGACGTACATGCATATCCT
GTCCAAACGGTTTGCTGATGGTGGACTGAAAGACGCCCTTATCCAAAGTT
CAGTCATTGCTGAAGGTTCTGTTGACTCAGCCTTGCGTGGTAAAAGCTAC
AACCGAGGTGTACGGATGTATAAGCTGTTTTATGAAGCCCTCCAGCGCCT
TCTAATTGACCAATTGGTGGAAAGTGGAAAGTGTGGTCGAGTTGATGAGG
CTTGCAATGAATTGGTCTTGGACAAGATCGACAAACAAATCTACGATACC
ATAGACGCAGATACATGTATCGAGGAGACTTTCCGATCAAATGAAATAAT
TCCACTCAAACATCTCGTATCAATTATGGAAGATAAACTGAAAGAAAGCG
ATCTGGCAATGAATGCTTCCactagaaaaaatttcaaaagagatCTACAA
ACACAAGCACCATCTCTTAAATTCCTAGATTCTGGGAATGAGATCTATGT
TTACAGCAAATCTGCCTCAATCGAAGATATTATGCTTAAATATATCAAAG
CTAAGGAGGAAAACGACCAATTGAAGAACGAACAGCAGAATGAGGAAGAA
CAATTCATTAAATGCTTTGCAATTTTACGAAAGGAAGTTAAACAGCTGAA
TGATACAATGCCTTGGCCACCGCAACCAGAAGACCTAACTCCGGATAAGG
TTGTCATTCCACCAATGCTGAACATGGCCCTCTCAACACTTTTGAAAAGT
AAAGATGGCACATTGACAGAAAAAGCCGAACGGTTGAAGATGTCTATTGC
ACAAGATATCATCTATGCAGTGACTCAAGGGAGAGTCAAGACCCCGAAAA
GCATCCTGCTCCCAAGTATTGTTAAAGCGTTAACGAACAACACTGAGATC
ATCACATCACTAAACAAACTAGGACATGGTATTGCTTACACGCAACTCAT
GGAAATTCAAACGGAAAACGCTTACATGATTGTTGATAAACAGAAAGAGA
ATGGCACTTCCTCTTCNGTTAAAGCGTTAACGAACAACACTGAGATCATC
ACATCACTAAACAAACTAGGACATGGTATTGCTTACACGCAACTCATGGA
AATTCAAACGGAAAACGCTTACATGATTGTTGATAAACAGAAAGAGAATG
GCACTTTGCTTCTTAATGCGTTGAAGGAGATTTTTAGCTTATACGTCGCT
GACAACATTGATAGAAATGAAGAAACTCTAACAGGCACTGGAACTACACA
TAAAGTTAACAATCTATTAatccaaatgaaaaaaaaccctNTTAACAATC
TACTAatccaaatgaaaaaaaacccgTCAAATGTGACGACACCACCTCTA
CCAGAACCGTCTCGTTATCGGAGGCAGAAACGAGTatcatttgaaattca
agatgATGATAATCAGGCCGTTATCGTTTTCGGAGGAAAAAGGAAAGATc
cagaaaatcgaaaatttcctGAAAATCCATTCAAAGACTGGCTGTTTGCT
GACAGAGAGAAATCTAACTTTATCTGGGCTCTCCTGCGTCGAGACTACTC
TCCACGACAGATTATCCCAAGCTGGTCTGGCTTCAACATCTCCATCCAAG
ACGGGATTCCTGTAATGAAATCGTCTATCGAATATCTTAATTGTATAAAC
AAACCAGCAACCGAGAAATCAACTATACATCAGGTTCTCTCACGAGCTTT
GGAGATGATTGCATCTTTGAAGCTAAAATCAATTGTTTGCGTATTCGACC
AAGCGATTTATTGCAAAGCATGCGAGATCAAATGGAGAGAGCCAGAGAAG
TTTCGTAATTGTGTGCTGATGATGGGCATGTTTCATATGATCATGACGTA
CATGCATATCCTGTCCAAACGGTTTGCTGATGGTGGACTGAAAGACGCCC
TTATCCAAAGTTCAGTCATTGCTGAAGGTTCTGTTGACTCAGCCTTGCGT
GGTAAAAGCTACAACCGAGGTGTACGGATGTATAAGCTGTTTTATGAAGC
CCTCCAGCGCCTTCTAATTGACCAATTGGTGGAAAGTGGAAAGTGTGGTC
GAGTTGATGAGGCTTGCAATGAATTGGTCTTGGACAAGATCGACAAACAA
ATCTACGATACCATAGACGCAGATACATGTATCGAGGAGACTTTCCGATC
AAATGAAATAATTCCACTCAAACATCTCGTATCAATTATGGAAGATAAAC
TGAAAGAAAGCGATCTGGCAATGAATGCTTCCactagaaaaaatttcaaa
agagatCTACAAACACAAGCACCATCTCTTAAATTCCTAGATTCTGGGAA
TGAGATCTATGTTTACAGCAAATCTGCCTCAATCGAAGATATTATGCTTA
AATATATCAAAGCTAAGGAGGAAAACGACCAATTGAAGAACGAACAGCAG
AATGAGGAAGAACAATTCATTAAATGCTTTGCAATTTTACGAAAGGAAGT
TAAACAGCTGAATGATACAATGCCTTGGCCACCGCAACCAGAAGACCTAA
CTCCGGATAAGGTTGTCATTCCACCAATGCTGAACATGGCCCTCTCAACA
CTTTTGAAAAGTAAAGATGGCACATTGACAGAAAAAGCCGAACGGTTGAA
GATGTCTATTGCACAAGATATCATCTATGCAGTGACTCAAGGGAGAGTCA
AGACCCCGAAAAGCATCCTGCTCCCAAGTATTGTTAAAGCGTTAACGAAC
AACACTGAGATCATCACATCACTAAACAAACTAGGACATGGTATTGCTTA
CACGCAACTCATGGAAATTCAAACGGAAAACGCTTACATGATTGTTGATA
AACAGAAAGAGAATGGCACTTCCTCTTCNGTTAAAGCGTTAACGAACAAC
ACTGAGATCATCACATCACTAAACAAACTAGGACATGGTATTGCTTACAC
GCAACTCATGGAAATTCAAACGGAAAACGCTTACATGATTGTTGATAAAC
AGAAAGAGAATGGCACTTTGCTTCTTAATGCGTTGAAGGAGATTTTTAGC
TTATACGTCGCTGACAACATTGATAGAAATGAAGAAACTCTAACAGGCAC
TGGAACTACACATAAAGTTAACAATCTATTAatccaaatgaaaaaaaacc
ctNTTAACAATCTACTAatccaaatgaaaaaaaacccgTCAAATGTGACG
ACACCACCTCTACCAGAACCGTCTCGTTATCGGAGGCAGAAACGAGTatc
atttgaaattcaagatgATGATAATCAGGCCGTTATCGTTTTCGGAGGAA
AAAGGAAAGATccagaaaatcgaaaatttcctGAAAATCCATTCAAAGAC
TGGCTGTTTGCTGACAGAGAGAAATCTAACTTTATCTGGGCTCTCCTGCG
TCGAGACTACTCTCCACGACAGATTATCCCAAGCTGGTCTGGCTTCAACA
TCTCCATCCAAGACGGGATTCCTGTAATGAAATCGTCTATCGAATATCTT
AATTGTATAAACAAACCAGCAACCGAGAAATCAACTATACATCAGGTTCT
CTCACGAGCTTTGGAGATGATTGCATCTTTGAAGCTAAAATCAATTGTTT
GCGTATTCGACCAAGCGATTTATTGCAAAGCATGCGAGATCAAATGGAGA
GAGCCAGAGAAGTTTCGTAATTGTGTGCTGATGATGGGCATGTTTCATAT
GATCATGACGTACATGCATATCCTGTCCAAACGGTTTGCTGATGGTGGAC
TGAAAGACGCCCTTATCCAAAGTTCAGTCATTGCTGAAGGTTCTGTTGAC
TCAGCCTTGCGTGGTAAAAGCTACAACCGAGGTGTACGGATGTATAAGCT
GTTTTATGAAGCCCTCCAGCGCCTTCTAATTGACCAATTGGTGGAAAGTG
GAAAGTGTGGTCGAGTTGATGAGGCTTGCAATGAATTGGTCTTGGACAAG
ATCGACAAACAAATCTACGATACCATAGACGCAGATACATGTATCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007631XLOC_007631Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013656-exon-sc0000171-1491911889:6043..6549TCONS_00013656-exon-sc0000171-1491911889:6043..6549Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1510915933:6043..6549TCONS_00013656-exon-sc0000171-1510915933:6043..6549Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1575043694:6043..6549TCONS_00013656-exon-sc0000171-1575043694:6043..6549Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1491911889:6709..7113TCONS_00013656-exon-sc0000171-1491911889:6709..7113Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1510915933:6709..7113TCONS_00013656-exon-sc0000171-1510915933:6709..7113Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1575043694:6709..7113TCONS_00013656-exon-sc0000171-1575043694:6709..7113Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1491911889:7229..7677TCONS_00013656-exon-sc0000171-1491911889:7229..7677Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1510915933:7229..7677TCONS_00013656-exon-sc0000171-1510915933:7229..7677Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1575043694:7229..7677TCONS_00013656-exon-sc0000171-1575043694:7229..7677Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1491911889:7854..8307TCONS_00013656-exon-sc0000171-1491911889:7854..8307Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1510915933:7854..8307TCONS_00013656-exon-sc0000171-1510915933:7854..8307Clytia hemisphaericaexon
TCONS_00013656-exon-sc0000171-1575043694:7854..8307TCONS_00013656-exon-sc0000171-1575043694:7854..8307Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013656-proteinTCONS_00013656-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000171supercontigsc0000171:6043..8307 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.132544	0	0.0250123	0.0244706	3.5699	1.98489	2.21802	2.15084	0.706659	1.91579	0.900913	1.01664	0.582841	0.742936	0.100351	0.161538	0.271854	0.193185	0.0524532	0.196586	0.201373	0.312539	0.0506576	0.215933	1.38751	1.25397	0.151454	0.0646543	0.285408	0.341717
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013656 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top