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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013649 ID=TCONS_00013649|Name=TCONS_00013649|organism=Clytia hemisphaerica|type=transcript|length=1870bp
aaagttatagcataagtagaaaaaaagctcaatttttgcaatcgcaaatt
taacctctaaaaatcgcgaatttttcaaccaaaaatacattcaaatatag
cgcttttgactctctaaaagaagcaaaaacaatttccataattataattg
actatcaaaagttacaggcattcttgtttccactgccaattatatctgga
cagactttaggaaCAGTTCTTAAAAAAGTTAAGTTTTTAAGTTTAAGATT
TTGattattattaattttctttattgtGCAAGTAGCACGGGttctttttg
attattttttcgtCCAACAATTTCTTATCAGGCAccatgtttgtttgttt
gttgtttgtttgttttttgttttttgtttgttttgttgattAAATTGTAT
TATATTCAGTTATATTGTGTATTATCAACATCAAATAAGAGTCTGAacaa
atctgtttttttttcgtgGAAACCTTCGAAGACAAAACAGTCGGATTAAA
ACAGATTCCAATCAGACCCTAGGCTGCACTGCACGCATACCCttagatat
gttttgatatatggatggatgcgtatcgtgtataaaattcccgtctaAGA
GTTACACCAAATTTTCGTGTTATTGAGTTTTCGAAACTTGATTACTAAGT
TTTATATGACATTatgagagatctttaaatttcattaaatttgaattgaa
aatttgaatgacTATAGAGGTTATTAATCATTATTAATCATCTTAAACtc
tttaaataaaattgaaacagggcgggaattttatacacgatttGCATCCC
ctttatcaaaacatatcacAGGGGATGTTTGCAGCCTAATCAGACGAATT
CCCAATTTCTTATTATTCAGTCGgacaaaattttataaaataacgtTTAG
CCGTGTACATAGTTTTTTTGAgtcttgtttttatttcatgTTCTTCCTTT
TGGGAATCGTTACATGTCTAGCAaagttaaatatatttttatttgtaaGT
GTTCATGGTTTCCTCGTACAGCACGAGTAAAAGttacatttcttttattt
ttttattaaattaattttttctataGTATCTTAAATAACGGAACTCGAAA
TTAAGACTGGAATGGACATCTTGGATAccaatttttctttctaaaGCCAC
TCTTTTACTTCGAAGATATTGCACCATAGAGTTTCAACAGAAAGAGTACA
AGCCATCTTTTttctagaaagaaaaaggaaaagttaAGTCTTAAAAGTCG
TGCAACATTTCGGATGACGAATTGAACTTTCTTTGTTCTCGGGTTTTAAA
TTCCGGCAGTAAATGTTACTTCCAATCAAACGCTTGTCTGAAAACCATGC
AGGCCGCGCAACTTTTGTAGGAAAtaaatggcttcaaatcctacataAGA
GATTGGATTTTAGCTTCCGGTTATACTTGATTGCATTGCGCTGTAactca
aaatggtagctggaaTCTATTTTTGATCTTTAAATGTCCGTtccagtctt
ttttttaaagttcagtGAGTAAAATTGTTCGAGGAGCACACAGCGTTCTT
TTCAGATATTCTCCCATCTTTGAAATATATGATAACAAATTGTAATTAAT
ACATTACATTTTTCACTCTCAAAGTGAAACCAATAATTTGCAATGTCACT
TGATGATAATCTGatcaaaaattcttcaaaactgaaaaaattttggtcaa
atctgCATCCACTTGACATATACTCTTTGGGCGCAGGGTAAATTTTTAGA
GTAACACCGTTCCAAAAATAAATGCCATGTTAAATAACCCGCGGTACAGA
CCAATCAATCGTCCAAAGAAAAACTTAGAAGGTCTAGTAGTATTTGTTAT
AAAGCGATCCATTGATTCCC Run BLAST on NCBI transcript from alignment at sc0000170:451823..453692 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013649 ID=TCONS_00013649|Name=TCONS_00013649|organism=Clytia hemisphaerica|type=transcript|length=1870bp|location=Sequence derived from alignment at sc0000170:451823..453692 (Clytia hemisphaerica)
GGGAATCAATGGATCGCTTTATAACAAATACTACTAGACCTTCTAAGTTT
TTCTTTGGACGATTGATTGGTCTGTACCGCGGGTTATTTAACATGGCATT
TATTTTTGGAACGGTGTTACTCTAAAAATTTACCCTGCGCCCAAAGAGTA
TATGTCAAGTGGATGcagatttgaccaaaattttttcagttttgaagaat
ttttgatCAGATTATCATCAAGTGACATTGCAAATTATTGGTTTCACTTT
GAGAGTGAAAAATGTAATGTATTAATTACAATTTGTTATCATATATTTCA
AAGATGGGAGAATATCTGAAAAGAACGCTGTGTGCTCCTCGAACAATTTT
ACTCactgaactttaaaaaaaagactggaACGGACATTTAAAGATCAAAA
ATAGAttccagctaccattttgagtTACAGCGCAATGCAATCAAGTATAA
CCGGAAGCTAAAATCCAATCTCTtatgtaggatttgaagccatttaTTTC
CTACAAAAGTTGCGCGGCCTGCATGGTTTTCAGACAAGCGTTTGATTGGA
AGTAACATTTACTGCCGGAATTTAAAACCCGAGAACAAAGAAAGTTCAAT
TCGTCATCCGAAATGTTGCACGACTTTTAAGACTtaacttttcctttttc
tttctagaaAAAAGATGGCTTGTACTCTTTCTGTTGAAACTCTATGGTGC
AATATCTTCGAAGTAAAAGAGTGGCtttagaaagaaaaattggTATCCAA
GATGTCCATTCCAGTCTTAATTTCGAGTTCCGTTATTTAAGATACtatag
aaaaaattaatttaataaaaaaataaaagaaatgtaaCTTTTACTCGTGC
TGTACGAGGAAACCATGAACACttacaaataaaaatatatttaacttTGC
TAGACATGTAACGATTCCCAAAAGGAAGAAcatgaaataaaaacaagacT
CAAAAAAACTATGTACACGGCTAAacgttattttataaaattttgtcCGA
CTGAATAATAAGAAATTGGGAATTCGTCTGATTAGGCTGCAAACATCCCC
TgtgatatgttttgataaagGGGATGCaaatcgtgtataaaattcccgcc
ctgtttcaattttatttaaagaGTTTAAGATGATTAATAATGATTAATAA
CCTCTATAgtcattcaaattttcaattcaaatttaatgaaatttaaagat
ctctcatAATGTCATATAAAACTTAGTAATCAAGTTTCGAAAACTCAATA
ACACGAAAATTTGGTGTAACTCTtagacgggaattttatacacgatacgc
atccatccatatatcaaaacatatctaaGGGTATGCGTGCAGTGCAGCCT
AGGGTCTGATTGGAATCTGTTTTAATCCGACTGTTTTGTCTTCGAAGGTT
TCcacgaaaaaaaaacagatttgtTCAGACTCTTATTTGATGTTGATAAT
ACACAATATAACTGAATATAATACAATTTaatcaacaaaacaaacaaaaa
acaaaaaacaaacaaacaacaaacaaacaaacatggTGCCTGATAAGAAA
TTGTTGGacgaaaaaataatcaaaaagaaCCCGTGCTACTTGCacaataa
agaaaattaataataatCAAAATCTTAAACTTAAAAACTTAACTTTTTTA
AGAACTGttcctaaagtctgtccagatataattggcagtggaaacaagaa
tgcctgtaacttttgatagtcaattataattatggaaattgtttttgctt
cttttagagagtcaaaagcgctatatttgaatgtatttttggttgaaaaa
ttcgcgatttttagaggttaaatttgcgattgcaaaaattgagctttttt
tctacttatgctataacttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013649-exon-sc0000170-1491911889:451823..453692 | TCONS_00013649-exon-sc0000170-1491911889:451823..453692 | Clytia hemisphaerica | exon |
| TCONS_00013649-exon-sc0000170-1510915933:451823..453692 | TCONS_00013649-exon-sc0000170-1510915933:451823..453692 | Clytia hemisphaerica | exon |
| TCONS_00013649-exon-sc0000170-1575043694:451823..453692 | TCONS_00013649-exon-sc0000170-1575043694:451823..453692 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000170 | supercontig | sc0000170:451823..453692 . |
Blast
The following BLAST results are available for this feature:
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