TCONS_00013594 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013594
Unique NameTCONS_00013594
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1516

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013594 ID=TCONS_00013594|Name=TCONS_00013594|organism=Clytia hemisphaerica|type=transcript|length=1516bp
TTAATATAATtaataaagaaataaagaaaaaagcaaaatggcagaaaata
ctacaaaaagagagaaaattgcCCAGATGTCTTCTGAGGTTGTGGATAGT
AATCCATATAgtCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGATAA
TTATGAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGGATTGGAGGTG
TGGGCAGTGTTACTTCAGAAATGTTGACCAGGTGTGGTATAGGAAAGCTA
ATTATGTTTGATTATGACAAAGTAGAACTTGCAAATATGAACAGACTGTT
TTTTCGACCTGATCAATCTGGGATGAGTAAAGTTGACGCAGCTGTAAATA
CGTTAAgGGATATAAACCCTGATGTAGAGTTCGAAGCACACAATTACAAT
ATTACAAGTGTAGATAATTTCAATCATTTCATGGGCAGAATAAAATCAGG
TGGCTTGAACGGAAAGCCAGTCGATTTGGTATTGAGTTGTGTTGATAATT
TCGAAGCAAGAATGGCTATTAATACTGCGTGTAATGAAATCGGTCAAGCA
TGGATGGAATCAGGGGTCAGTGAGAATGCTGTATCAGGACATGTTCAAGT
CATATTACCTGGTGAAACAGCTTGTTTTGCTTGTGCACCACCGTTAGTAG
TGGCATCAAACATTGATGAGAAGACATTGAAGCGTGAAGGAGTATGTGCT
GCTTCTTTACCCACCACCATGGGAATTGTTGCTGGTTTCCTCGTACAAAA
TACACTAAAATACTTACTGAAGTTCGGTACAGTATCATACTACTTAGGTT
ACAACGCAATGCAGGATTTCTTTCCAACAATGATTATGAAACCCAACCCG
CATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTACCAGGAGAA
GTTAGCAAAACAACCGAAGGAAGAAGGCGTTaaagaaactgaagaagaag
aaattgttCACGAAGATAATGAATGGGGTATTTCATTGGTCGACGAGTCA
TCCGATTTACGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTC
GTACGCATATACTAAACCTGCAGAAACAACAGAAGAACAGACTGAACCAG
CCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGTCTAGAGGAT
TTAATGagacaaatgaaacaaatttagttcttttttagatttaatttacg
aaaaaatcttcttttttaatttttttaagggGGTTGGGtctcttctttat
ttttttttgcaaaaatcaacaGAAGCGAGGCGTGATCTTCTAGCTTTGAA
CAATTCATACCTTTTTCGCCCGGGCTTTTTCgtcaaaaagtctttgaaat
CCGACGTCGGAAAGTAGAAAACATTTATCTTTCGCTAGCTTTAataatta
ttgaatttgaatttttgaaccaaatttttaaatttctttttattttttat
gtacTTAAGTGgtataaattttatttattatacaaTACTGAACAATGAAA
TTAAAAcagaaaatca
Run BLAST on NCBI

transcript from alignment at sc0000170:49107..61031-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013594 ID=TCONS_00013594|Name=TCONS_00013594|organism=Clytia hemisphaerica|type=transcript|length=11925bp|location=Sequence derived from alignment at sc0000170:49107..61031- (Clytia hemisphaerica)
TTAATATAATTAATAAAGAAATAAAGAAAAAAGCAAAATGGCAGAAAATA
CTACAAAAAGAGAGAAAATTGCCCAGATGTCTTCTGAGGTTGTGGATAGT
AATCCATATAGGTATATTTTATTATTTCATCTTGTCTTTCTATCATTAAT
TTGTCTTATAATTTAGCATATTTTGGTGCACGTGCTACTGTACTTGATCA
GTTTTGTTTTTAGGAAGCTCTAGTCTACAGCTATTGGCTTTTATAGTTAT
AAATAAATTTTTGGTTAACGTGTATGTCTGTTTTCTTCAAAAGTTGTCTT
ATGATTGTGACTATCTTCTGGGTTATGTCTGTTTATAACCTTAGTTAAAA
ATCTATTATCAATCCTTACAACACTTTGGTTTTTTTTATAAATTGTGATT
AGTTTTACTTCTTTAGTTGTTCTTTTTCTTCAATTACACTCGACTTTAAA
AATCATTAGATATATTAGCACAGTTTAGTGGCCAATATACCCAATATACT
ATAATCCTGTACAATTTTGTAATGGTTCAAATTTTCTCGCAAAACAGAAT
ATCAGAGACTATATCAGGCTTATACTTTGTTAAAATTGTAAGAACAATCG
AGCTCTAGTTTTTTCATTTCAAGATAATCCACTTTTTTGTTCAAAAAACT
CAACATGATTTTTTTTTAACTTTCAGTCGTTTGATGGCTCTGAAAAGGAT
GGGAATAGTTGATAATTATGAGGTAGGGCATCATTTAAAAAATTTATACG
TCAAAAATAAAATGTATAAAAGGAACCAAGAAATTAAATTTTATATAACC
TTGCTATACATTCTTTTCAGTTTTGATTATTTGTCATATTTGCAAGAAAA
ATGTAGAAATGTATAAAATCGGAACACGAAATGATAAAAACGTTTTCTAA
GAAAGTGGGAAAATATTGATTTTAAGTCATGTGGCTTTTTTATGATCATA
TTATGATTTAGTCAAACATACAGCAATGCACAAAGTTCATTTGTCTCGTC
TTTATCATTCCGTTCTTCACAATTTGGAGAATCCAGGTTTATTTTTGTGT
AGGATTAAGTTTCCTTCTGAAATTTAAAAAATTTTAATTTAAAGATCCAA
ATTTACAAAAAGTTATTCCCCTCTTTTTCAGCGTATTCGTGATTACAGCA
TTGCAGTAGTTGGGATTGGAGGTGTGGGCAGTGTAACTTCAGAAATGTTG
ACCAGGTGTGGTATAGGAAAGGTAACGTAATGTGTTTTTAGGTTAGATAT
TAAAAAATCAAATCAAATATTTAAAAACAAGCTCTCCTAGGATGATATAG
TGCAATACTTTTACTTAAAGGTTTTGTTTTTAAATAAGAGTGATCGTTTG
CTTATTCATCAATTTTAATTTACAAGCTATTTCACATTGGATTGACACGG
ATGTGGAGCAAGATGATTAAAAAGAGGGAAAGAAAAACAGTTTTTATATC
AGCACAAGATAACAATAGGCAGACACTGTCCTGATATGAAATATGTGTCT
CATATGAAACGGGAACACTTATGTAAAAATAAAACCTTTAAAATAATTAC
ATTTTNCCAGATGTCTTCTGAGGTTGTGGATAGTAATCCATATAGGTATA
TTTTATTATTTCATCTTGTCTTTCTATCATTAATTTGTCTTATAATTTAG
CATATTTTGGTGCACGTGCTACTGTACTTGATCAGTTTTGTTTTTAGGAA
GCTCTAGTCTACAGCTATTGGCTTTTATAGTTATAAATAAATTTTTGGTT
AACGTGTATGTCTGTTTTCTTCAAAAGTTGTCTTATGATTGTGACTATCT
TCTGGGTTATGTCTGTTTATAACCTTAGTTAAAAATCTATTATCAATCCT
TACAACACTATGTTTTTTTTTATAAATTGTGATTAGTTTTACTTCTTTAG
TTGTTCTTTTTCTTCAATTACACTCGACTTTAAAAATCATTAGAGATATT
AGCACAGTTTAGTGGCCAATATACCCAATATACTATAATCCTGTACAATT
TTGTGATGGTTCAAATTTTCTCGCAAAAAGGAATATCAGAGACTATATCA
GGCTTATACTTTGTTAAAATTATAAGAACAATCGAGCTCTAGTTTTTTCA
TTTCAAGATAATCCACTTTTTTGTTCAAAAAACTCAACATAATTTTTTTT
TAACTTTCAGTCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGATAAT
TATGAGGTAGGGCATCATTTAAAAAATTTATACGTCAAAAATAAAATGTA
TAAAAGGAACCAAGAAATTAAATTTTATATAACCTTGCTATACATTCTTT
TCAGTTTTGATTATTTGTCATATTTGCAAGAAAAATGTAGAAATGTATAA
AATCGGAACACGAAATGATAAAAACGTTTTCTAAGAAAGTGGGAAAATAT
TGATTTTAAGTCATGTGGCTTTTTTATGATCATATTATGATTTAGTCAAA
CATACAGCAATGCACAAAGTTCATTTGTCTCGTCTTTATCATTCCGTTCT
TCACAATTTGGAGAATCCAGGTTTATTTTTGTGTAGGATTAAGTTTCCTT
CTGAAATTATTGAAATTCTAATTTAAAGATCCAAATTTACAAAAAGTTAT
TCCCCTCTTTTTCAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGGAT
TGGAGGTGTGGGCAGTGTTACTTCAGAAATGTTGACCAGGTGTGGTATAG
GAAAGGTAACGTAATGTGTTTTTAGGTTAGATATTAAAAATCAAATATAT
AAAAACAGCTTTTAATTTACAAGCTATTTCACATTGGATTGGCACAGATG
TGGAGCAAGATGATTAGAAAGAGGGGAAGAAAAACAGTTTTTATCAGCAT
AGTATAACAATAGGCAGACACTGTCTTGATTTGAAATATGTGTCTCATAT
GAAATGGGAACACTTATGTAAAAATAAAACCTTTAAAATAATTACATTTC
GATGATAACATTTTAAAGGTCGTTTTCAGGTATTCAATCATCGAATTTTA
GATTTTTTACAATTTTAGATTTTATGACTGGGCTAATCAATAACAAATTT
AATCGAGGTGTTAAATTCTTTTTGGAAGCTCTCAATCCCCTAGACTTTGA
TAAATTTATTACTGATCCCAGCATTTCCAAAGAAATACTGAAAATACTCT
CAAGCTATACTTTAACTTTTCCTCTACTTTAGCTAATTATGTTTGATTAT
GACAAAGTAGAACTTGCAAATATGAACAGGTATGTCTGCTTTCTAATCAA
AATGCAAGGTATATACCCCTAGTCTCTTTCAATTTCTATCTTTTAAAGTT
AAGTATCCAAGGTTGCAGAAAATGGTTGCTATCAACTTTTTATCAGAGTA
TTTAACTTTTCTTCTGATTCTAGACTGTTTTTTCGACCTGATCAATCTGG
GATGAGTAAAGTTGACGCAGCTGTAAATACGTTAAGGTTTGGAATTTTTT
ATTGAAGACCAAAATATTCTATCTGTACTCATGGGTAATCACCTCATGTT
GGTTAAAATTTTGGAGGTTTTTGCGTCTAACCAACAGCAAGCCGTTATGA
GGGCGCAATCAGTCCTGATTACTAATGATTCATTTGAAATGATCCTATAT
TTTTCGTATATTTTTCATGATTCAGCACTACTATAGGCTGCACGCAGCCC
CTCTGATATGTTTTGATATAGGGGCTGAGTGTCGTGTATGAAATCCTCCT
CCGAGAGTTACCCCCGTCTTTGTGTTTTTGAATTTTAGAAACTTGATTAG
CTTGTGATTTTCAATACCCGTCGCCGAAAAAAAAATCTCATCATAATTAA
ACTTCTTATACGCCTCAAAGAGTTGAAAAACCTCTCTAAATAATCGAAAT
CTCATCGTTTGACTTTTAATAACAGTATTTTTCATTCCCTGTTTTTAGGG
ATATAAACCCTGATGTAGAGTTCGAAGCACACAATTACAATATTACAAGT
GTAGATAATTTCAATCATTTCATGGGCAGAATAAAGTAAGATAAGTATTG
ATTTATATTTATTTATTTATATGTTGTGTTTGTTTTAAAATTTTGTTTTG
AAACACCAAAAATGGTTTTTAGTAATTCTTTTCCTAGGCCCTTAAATCTG
GCTAAATGTTTTATCTGAAATGGTCAAAGTACACTTGACACGTTTTTTTA
GATCAGGTGGCTTGAACGGAAAGCCAGTCGATTTGGTATTGAGTTGTGTT
GATAATTTCGAAGCAAGAATGGCTATTAATACTGTAAGTAAGATCTATTT
TTCTGTTCTAGTTTTCCATCGTTTACCCCGTGAAATTAAATTAATTAATA
TTTCTCGTGAATTCCCCTTTCAAAAGGTACTCTGGGCTTACAAGACTTCT
TCCGTCTCCAATATTTTATAATAGGAATAAAATTAAAATATTGTTTTTAA
GGCGTGTAATGAAATCGGTCAAGCATGGATGGAATCAGGGGTCAGTGAGA
ATGCTGTATCAGGACATGTTCAAGTCATATTACCTGGTGAAACAGCTTGT
TTTGCTGTAAGTAGTCTATATGTCACCATCTGCACAGATATCTTATTTAA
AACACTAGATGGAGCCACTCTGTTGCTGGCTGAAGTAAAACAATGCACAG
TATTTAAAAGTAGACCACAGCAACTGTGCTATTAGCCAGGAGTTTGACCA
TCTACCCATTCCATGCTCTGTTTGCATTTCTCGACTTCAATTATTGTGAA
GTCGAACAAAAACATCTTTTTCTTAGCACTACTGAAAAAGGCCAGAAAAG
GCTCGATTTTGGTCAAGATAAGAACATACATGGCGCGAGGATCATCGCCC
CAGAACAAGTATCGCGTTTTCGACTAATTTAAGCCTTTTACCTGCTTTTA
CAAATATTTGGAGATATCGATGTATTTACTTGAACTGTCGTTTGATCGAA
GACAATTAGTCCAGAACTCATACCTAAAAAGCCTTGGGGCGTTTTATGCC
TAAATTACTTATCGGCCTTTTTACGCAGACCCTAATTTAGCGCCGGCCCC
TATTAGGCCAAAGCTAAATTTTTAGCCCGATTCCTTACGCCGCCCCCTAT
TACGCCAGTGACGAAAAAGTAACGCCATTAAGGACCGGATTAAGAAATGG
CTGATAAAATAATAATGATAACTTGTAATTTCGATTTTTAAAAGACAGTT
TATATTGATTGTCTTTGGGACATAATGGTGAATTCTTGATTTATTTTTAC
TAGTGTGCACCACCGTTAGTAGTGGCATCAAACATTGATGAGAAGACATT
GAAGCGTGAAGGAGTATGTGCTGCTTCTTTACCCACCACCATGGGAATTG
TTGCTGGTTTCCTCGTACAAAATACACTAAAGTAAACAAGTTTTCATCTT
TATGTTTCTACTGTAAATTTTAAGTTGAATCGTAGCTTTCTAAAAGTTTT
TCACCTTTAAATATTACTCCCATAAGTCACTGCACGCCTACTAAAGTCTG
TTCACGATAAGTGTGCACTCTTTTTTCTTTTATCTATAACTTTTGAAGGA
ATTCTTCAATCTTTATAAATTTGGTATTATTGGAAAGATATCAGTGAGTG
GAACAATTTGAAATAAAAAAATCTTTTAAAAAATTCTAAAAATGAAGATG
AAAATGAAGAAGAAAAAAATGAAGATCTTATAGAAAAGTGCTATAACTGT
CATTTTCACTGAAGTGAATCCTTGATCATCGAACATTATCACTGAAAAAA
TTTCTCAAAAATAATTATTTTGTCAAAAGATATCAAACAAAGTTATAAGC
TGATTGACGTCTAAAAACGCTGTTTTCTGCTGTTTTCTGCTTTTTTGGGG
TCAATCACTTATTAACTTTGTATCATAACTTTATATTGAATGAATATTCT
AGTGAAATTTCTTCACACTGATAACCTCCTAAGATCAAAGAATCTCTCCA
GTGAAAATGAAAGTCAAAGCCCTTCTCTACAAGATCTTCATTTTTTTCTT
CTTCATTTTCATCCTCGTTTTTAGAATTTTTTCAAAGATTTTTTTATTTC
AAATTGTTTCACTCACTGATATCTTTCCAACAATACCAAATTTATAAAGA
TTGAAGAATTGCTTAAAAAGTTATAGGTTAAAGAAAAAAGAGTGCACACT
TATCGTGAATAGACTTTAGACCTGTAGATTTGGAATGCCATGAGTTGAAG
TAATTATTTTTTCGCCATTCAATGACTTATACATCTACTTATTTTTGAAT
AATTGTAAAAAACCTTGGACCTCAAAGAATATTATTATAGTGTGTTTATA
TTTTAATGACCTGTTTAGTTGCCTTGAGAATTTATTAGCAAATAATTACC
ATAAGCAGTACGGCACGATATCCTATATTTAAGGACCTTATATTTTTAGA
ACCGTCCTTATATAGGGATGTCCTTATATTTAAGGACCTTTTTTCTACTG
GATCGATAAAAACCCGATCTAGTAAGCAAAGGTCCCTATTTATGGGGACG
TCCTTAAATATAGGTCCTCTCCCGTACAGATAAGGGAACTAATTTAGGCG
AATTTGGCGAAATATTCAACCAAAATTGAAATAATTGCTGGCTCTGGCTT
TCAGTGTAAAGAAACTGATTTGCCATACCATTCGCCAAACTTAGTTCTCG
CCAAAAATAAAATTGCGTTTCTCATCAAAATGATTTCTTTTTAAAAATTT
CCCGGATACTGTTTTCCGATACCCTTCACACGTATTGATTTCTCTAAAAT
GGTGGCTTCTAGGCTACGCCATCTTCCTTCGTTTCGAGCGTAAAACTTCT
ACTCTTCGGGATATGCTCGCAGCTCTTGTTTTGAATATTTCTCCGGATAC
ATCGCATGCGCACTGAGGTTGTAAAGGAACAATCGAGAGTTTCGAAACCT
AAACCAATCAGCTGTGTTTCAAACATTCTTTTATTTGAAACCTCTATTGA
TAAACATCTTTTGTTAAAGTTTTCTATTATTTTTAAACCTAGTAATAAGC
GAATTTCCGGTGGGGGTCACTAGTTGCCTCCCATAGCAGTGCCTATAGAC
CAAGAGTAAGGCCTAAAAGCCTGTAGCTGTCTATTGTTTAGACTAGGTTG
CTTTTCAATCACAAGATAGTTATGATATATCATTGATTTTCAAATTCTTG
TTTGCATATCTTTTCAGATACTTACTGAAGTTCGGTACAGTATCATACTA
CTTAGGTTACAACGCAATGCAGGATTTCTTTCCAACAATGATTATGAAAC
CCAACCCGCATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTAC
CAGGTGAGCCAGGGCGACCCCCCCCCCCAAGGGCCCCCCCCCCCCCGTCC
CCTAGAAAGGAGGGTACTTAAAATCTTCCAAAAATAGGCCTTATCGAAGT
TTTTGATTTTTCTAAAAAAATCGATGCATTGTGGGATTTTTTCGAGTGTA
TTACAATAGAAATCTCTTAGGAATTCATCGAGGGAATTCTATTGTAATAC
ACTTGAAACAATCCCACAATGCATTGCTTTTATAGAAAAATCAAGGTCTA
TTACTAAAAGGCAGGGTAAAGAACAAAACAAACTGTACCAAAGATTGTTA
TTTTCGAAAGTCTGTCCTTTTGGGATCAAAAAAAGCTGGAATGGATTTTT
TTGGGGGTAGGTACATTATGCACTAAGTGGAGATTTAAGTTGTAAATTTA
TTAAGGTATGGATGGATTTTTCAGGGAAACCCAACTACGCACAAAGGGGA
GTGTTTCTACGGAAACTGTAATTTTTCAACAGAATGCTATGATAGAAAAG
AAATTCATGATATGCACCATTGCAATGTCTTCCATTCCACCCAATAGCTG
ATTGGTTGTAAGTGACGTATTGACTGATTTTACGTCACTTACAACCAATC
AGCTGTTGGGTCCGTGATGTAATGTCAGAAGACATTGCAGTGGTGCATAT
CATGAATACCCCATTTCATTCACAGTCGAAATGAATCATGGGTAATCAGG
ACCACCACGCTCCGATAAGGACTTTCAATTGGTCTAAATTTTAGGATGTT
TTTGTGTCTAGCCAACGAAAAGCTGTTATGGAGGCGCAATCATTCCTGAT
TACCCATGATTCATTTAGACTGTAAAATGGCTTAGAGAGGCCTTTAATAT
ATCCTTTTCTAACTTTTAAACATAACTTTTTTATTCTTTACTTTACCTCA
CAGGAGAAGTTAGCAAAACAACCGAAGGAAGAAGGCGTTAAAGAAACTGA
AGAAGAAGAAATTGTTCACGAAGATAATGAATGGGGTATGTAAAGTCTAC
TTCACTAGCAGGGAACAATAGCAAAGACTGTAATACTTTCGTTATAGTTT
GTATTTGAATAACATTCTTCTGATCGTTGAAAATATTTTTGTAAGACCTT
TGAAGTAAACCATTTTTCCTATGTCTGTAAATATTAATCTGTGAGTTCCC
ACGCGGTTTATTTTAAACATGGCAAACTGCTTCTTTGTCTGTACACCCAG
TATCTACAGCTAATTCCAAAATTCATTGCCGTAGGGGATAAACGTACTCC
GTACTACGAAGCGATAAACGTGAGATACACTCTGGTACATAGTAACTGCT
TCTATGCTTGGTGTTTAATAGGATTTTTAATGGTATTAAAAATCTTTCCG
AAGATAGTTAAAGAAGACTCTTTCTCCCTGGATTGCTCTACCTACCCTTA
ATCATTCTCTTAGTTGCTAAGCATCAAGCAGAGAGGCGTCAAAGTACCAT
TTTGGGAATCTTTGGTATGATCCGGCTGGGGGTCGAACCCACAACCTTGC
GCACCGTAGCCGGGTGCTCTACCACTGCACTACGGTCTGAATAAACTGAA
ACATATTTAATGTACCTTTTACTTGCACTTTTTAATCACCATAGGTATTT
CATTGGTCGACGAGTCATCCGATTTACGGGAGGACACACAACTACAAGAA
TTGACTACTGGACTTTCGTACGCATATACTAAACCTGCAGTGAGTCCTTT
CTATGTATTAATGCTGACAAGCTTGATAAGATACTACCATTTTTAATAAT
TTATTTTAAAAGCGAAATGCTTTGTCAAGAGACACAATTCAGTTTTTTTT
CTAACAAGCAAGTTTTAAAGTGTATGAAATGATAAACAAAATTTAAACCT
TTCCATATTATGTAACCTTTTTCAACGGAAAAAAGGAAAAAAGGCCAAAG
CCAAAATCTCCAACTAAAATCCAATTAAAAATGTCGATGATGTTATTAGC
CCTGGGTTCGAGGGTGGGTTCTTTGTTTTGTAAAATTCATGATATGTACC
ATTACAATGTCTTCCAAGTACCCATTAGCTGATTGGTTGAAAGTGACGTA
AAAAGACTAAATTGATTGATTTTACGTCACTTACAACCAATCAGCTGTTG
GGTCTTTAATGTAATGTAAGAAGACATTGCAATGGTGCATATTATGAATA
GGGACCTTTAGCATCTAGGACGGCAGGATTGAACAAAAATGCCCTTGGGA
TTGATATGTGGATCGCAGCTAGATTCTTANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
ACTTTTTTATTCTTTACTTTACCTCACAGGAGAAGTTAGCAACACAACCG
AAGGAAGAAGGCGTTAAAGAAACTGAAGAAGAAGAAATTGTTCACGAAGA
TAATGAATGGGGTATGTAAAGTCTACTTCACTAGCAGGGAACAATAGCAA
AGACTGTAATACTTTCGTTATAGTTTGTATTTGAATAACATTCTTCTGAT
CGTTGAAAATATTTTTGTAAGACCTTTGAAGTAAACCATTTTTCCTATGT
CTGTAAATATTAATCTGTGAGTTCCCACGCGGTTTATTTTAAACATGGCA
AACTGCTTCTTTGTCTGTACACCCAGTATCTACAGCTAATTCCAAAATTC
ATTGCCGTAGGGGATAAACGTACTCCGTACTACGAAGCGATAAACGTGAG
ATACACTCTGGTACATAGTAACTGCTTCTATGCTTGGTGTTTAATAGGAT
TTTTAATGGTATTAAAAATCTTTCCGAAGATAGTTAAAGAAGACTCTTTC
TCCCTGGATTGCTCTACCTACCCTTAATCATTCTCTTAGTTGCTAAGCAT
CAAGCAGAGAGGCGTCAAAGTACCATTTTGGGAATCTTTGGTATGATCCG
GCTGGGGGTCGAACCCACAACCTTGCGCACCGTAGCCGGGTGCTCTACCA
CTGCACTACGGTCTGAATAAACTGAAACATATTTAATGTACCTTTTACTT
GCACTTTTTAATCACCATAGGTATTTCATTGGTCGACGAGTCATCCGATT
TACGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTCGTACGCA
TATACTAAACCTGCAGTGAGTCCTTTCTATGTATTAATGCTGACAAGCTT
GATAAGATACTACCATTTTTAATAATTTATTTTAAAAGCGAAATGCTTTG
TCAAGAGACACAATTCAGTTTTTTTTCTAACAAGCAAGTTTTAAAGTGTA
TGAAATGATAAACAAAATTTAAACCTTTCCATATTATGTAACCTTTTTCA
ACGGAAAAAAGGAAAAAAGGCCAAAGCCAAAATCTCCAACTAAAATCCAA
TTAAAAATGTCGATGATGTTATTAGCCCTGGGTTCGAGGGTGGGTTCTTT
GTTTTGTAAAATTCATGATATCTACCATTGCAATGTCTTCCAAGTACCCA
TTAGCTGATTGGTTAAAAGTGACGTAAAAAGACGAAATTGATTGATTTTA
CGTCACTTACAACCAATCAGCTGTTGGGTCTTTAATGTAATGTAAGAAGA
CATTGCAATGGTGCATATTATGAATAGGGACCTTTAGCATCTAGGACGGC
AGGATTGAACAAAAATGCCCTTGGGATTGATATGTGGATCGCAGCTAGAT
TCTATTCTTTTCATATCAATTTTCTCATGAGAATAGTGAATTTTAATAGG
GTAATTTTCAAATCTCAAGACGATATGAAAATTCTTTTCTGACGTCGTCT
TTGAGAAGATGGTAAAGGAAGAGTGCAATAGTTTTTAATGATATGAATCA
CTAGAGAATTATAACGTGATCTACAAAAAAATTGACTATATTTCAAATTA
TAGTTAATTCTAGATAAAATCGGATAAAATTTGCCGTTTGATTTAAGATT
TACTTCACGTCCCTAAAGGTCCCTAATATTGTGTCCGTTACAGACGGAAA
TTTGATCCGAAGATCTTATATTTTCGGACAGAGCTTGTTTTTTCGGAAAA
TGAAGTTAATTCCAGACTTCTTTTAAGATGTCTTACTTTAAAATATCAAC
CGAACTCTAAAGCAAAAACTAGAGCGTACATTTCTATGGAAATTTGGAAA
GTTTTTCTGGGTAGTGAGAAAGTTGAGTAGCATTACAGTACCTTTTATAT
AAGTTCTATAAGTTCTTTCTTTATCCCATAGGAAACAACAGAAGAACAGA
CTGAACCAGCCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGT
CTAGAGGATTTAATGAGACAAATGAAACAAATTTAGTTCTTTTTTAGATT
TAATTTACGAAAAAATCTTCTTTTTTAATTTTTTTAAGGGGGTTGGGTCT
CTTCTTTATTTTTTTTTGCAAAAATCAACAGAAGCGAGGCGTGATCTTCT
AGCTTTGAACAATTCATACCTTTTTCGCCCGGGCTTTTTCGTCAAAAAGT
CTTTGAAATCCGACGTCGGAAAGTAGAAAACATTTATCTTTCGCTAGCTT
TAATAATTATTGAATTTGAATTTTTGAACCAAATTTTTAAATTTCTTTTT
ATTTTTTATGTACTTAAGTGGTATAAATTTTATTTATTATACAATACTGA
ACAATGAAATTAAAACAGAAAATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007592XLOC_007592Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013594-exon-sc0000170-1575043694:60944..61031TCONS_00013594-exon-sc0000170-1575043694:60944..61031Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:59437..59459TCONS_00013594-exon-sc0000170-1575043694:59437..59459Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:58826..58871TCONS_00013594-exon-sc0000170-1575043694:58826..58871Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:58327..58416TCONS_00013594-exon-sc0000170-1575043694:58327..58416Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:57803..57849TCONS_00013594-exon-sc0000170-1575043694:57803..57849Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:57596..57658TCONS_00013594-exon-sc0000170-1575043694:57596..57658Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:57047..57133TCONS_00013594-exon-sc0000170-1575043694:57047..57133Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:56799..56880TCONS_00013594-exon-sc0000170-1575043694:56799..56880Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:56526..56630TCONS_00013594-exon-sc0000170-1575043694:56526..56630Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:55701..55828TCONS_00013594-exon-sc0000170-1575043694:55701..55828Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:53779..53914TCONS_00013594-exon-sc0000170-1575043694:53779..53914Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:52797..52878TCONS_00013594-exon-sc0000170-1575043694:52797..52878Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:50617..50711TCONS_00013594-exon-sc0000170-1575043694:50617..50711Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1575043694:49107..49550TCONS_00013594-exon-sc0000170-1575043694:49107..49550Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:60944..61031TCONS_00013594-exon-sc0000170-1510915933:60944..61031Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:59437..59459TCONS_00013594-exon-sc0000170-1510915933:59437..59459Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:58826..58871TCONS_00013594-exon-sc0000170-1510915933:58826..58871Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:58327..58416TCONS_00013594-exon-sc0000170-1510915933:58327..58416Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:57803..57849TCONS_00013594-exon-sc0000170-1510915933:57803..57849Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:57596..57658TCONS_00013594-exon-sc0000170-1510915933:57596..57658Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:57047..57133TCONS_00013594-exon-sc0000170-1510915933:57047..57133Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:56799..56880TCONS_00013594-exon-sc0000170-1510915933:56799..56880Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:56526..56630TCONS_00013594-exon-sc0000170-1510915933:56526..56630Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:55701..55828TCONS_00013594-exon-sc0000170-1510915933:55701..55828Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:53779..53914TCONS_00013594-exon-sc0000170-1510915933:53779..53914Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:52797..52878TCONS_00013594-exon-sc0000170-1510915933:52797..52878Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:50617..50711TCONS_00013594-exon-sc0000170-1510915933:50617..50711Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1510915933:49107..49550TCONS_00013594-exon-sc0000170-1510915933:49107..49550Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:60944..61031TCONS_00013594-exon-sc0000170-1491911889:60944..61031Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:59437..59459TCONS_00013594-exon-sc0000170-1491911889:59437..59459Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:58826..58871TCONS_00013594-exon-sc0000170-1491911889:58826..58871Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:58327..58416TCONS_00013594-exon-sc0000170-1491911889:58327..58416Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:57803..57849TCONS_00013594-exon-sc0000170-1491911889:57803..57849Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:57596..57658TCONS_00013594-exon-sc0000170-1491911889:57596..57658Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:57047..57133TCONS_00013594-exon-sc0000170-1491911889:57047..57133Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:56799..56880TCONS_00013594-exon-sc0000170-1491911889:56799..56880Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:56526..56630TCONS_00013594-exon-sc0000170-1491911889:56526..56630Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:55701..55828TCONS_00013594-exon-sc0000170-1491911889:55701..55828Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:53779..53914TCONS_00013594-exon-sc0000170-1491911889:53779..53914Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:52797..52878TCONS_00013594-exon-sc0000170-1491911889:52797..52878Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:50617..50711TCONS_00013594-exon-sc0000170-1491911889:50617..50711Clytia hemisphaericaexon
TCONS_00013594-exon-sc0000170-1491911889:49107..49550TCONS_00013594-exon-sc0000170-1491911889:49107..49550Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000170supercontigsc0000170:49107..61031 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	6.03713e-08	0	0.000172522	8.68889e-05	0.178672	0.000189401	0.108014	0.119999	0.668181	0.0168098	0.0197983	0.0139832	0	0	0.0763282	0	0	0	0	0	0	0	0.0240382	0.0103174	0	0	0	0
Blast
[Close]
BLAST of TCONS_00013594 vs. Swiss-Prot (Human)
Match: UBA5 (Ubiquitin-like modifier-activating enzyme 5 OS=Homo sapiens GN=UBA5 PE=1 SV=1)

HSP 1 Score: 468.389 bits (1204), Expect = 1.743e-161
Identity = 226/288 (78.47%), Postives = 261/288 (90.62%), Query Frame = 2 
Query:   59 REKIAQMSSEVVDSNPYSRLMALKRMGIVDNYERIRDYXXXXXXXXXXXXXTSEMLTRCGIGKLIMFDYDKVELANMNRLFFRPDQSGMSKVDAAVNTLRDINPDVEFEAHNYNITSVDNFNHFMGRIKSGGLN-GKPVDLVLSCVDNFEARMAINTACNEIGQAWMESGVSENAVSGHVQVILPGETACFACAPPLVVASNIDEKTLKREGVCAASLPTTMGIVAGFLVQNTLKYLLKFGTVSYYLGYNAMQDFFPTMIMKPNPHCDESFCLKRQQAYQEKLAKQPK 919
            R +I +MSSEVVDSNPYSRLMALKRMGIV +YE+IR +++A+VG+GGVGSVT+EMLTRCGIGKL++FDYDKVELANMNRLFF+P Q+G+SKV AA +TLR+INPDV FE HNYNIT+V+NF HFM RI +GGL  GKPVDLVLSCVDNFEARM INTACNE+GQ WMESGVSENAVSGH+Q+I+PGE+ACFACAPPLVVA+NIDEKTLKREGVCAASLPTTMG+VAG LVQN LK+LL FGTVS+YLGYNAMQDFFPTM MKPNP CD+  C K+Q+ Y++K+A  PK
Sbjct:   37 RVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPK 324
The following BLAST results are available for this feature:
BLAST of TCONS_00013594 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBA51.743e-16178.47Ubiquitin-like modifier-activating enzyme 5 OS=Hom... [more]
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