TCONS_00013591 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00013591
Unique Name	TCONS_00013591
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1514

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0000170:49107..61029-

transcript sequence

>TCONS_00013591 ID=TCONS_00013591|Name=TCONS_00013591|organism=Clytia hemisphaerica|type=transcript|length=1514bp
AATATAATtaataaagaaataaagaaaaaagcaaaatggcagaaaatact
acaaaaagagagaaaattgcCCAGATGTCTTCTGAGGTTGTGGATAGTAA
TCCtttcagtCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGATAATT
ATGAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGGATTGGAGGTGTG
GGCAGTGTTACTTCAGAAATGTTGACCAGGTGTGGTATAGGAAAGCTAAT
TATGTTTGATTATGACAAAGTAGAACTTGCAAATATGAACAGACTGTTTT
TTCGACCTGATCAATCTGGGATGAGTAAAGTTGACGCAGCTGTAAATACG
TTAAgGGATATAAACCCTGATGTAGAGTTCGAAGCACACAATTACAATAT
TACAAGTGTAGATAATTTCAATCATTTCATGGGCAGAATAAAATCAGGTG
GCTTGAACGGAAAGCCAGTCGATTTGGTATTGAGTTGTGTTGATAATTTC
GAAGCAAGAATGGCTATTAATACTGCGTGTAATGAAATCGGTCAAGCATG
GATGGAATCAGGGGTCAGTGAGAATGCTGTATCAGGACATGTTCAAGTCA
TATTACCTGGTGAAACAGCTTGTTTTGCTTGTGCACCACCGTTAGTAGTG
GCATCAAACATTGATGAGAAGACATTGAAGCGTGAAGGAGTATGTGCTGC
TTCTTTACCCACCACCATGGGAATTGTTGCTGGTTTCCTCGTACAAAATA
CACTAAAATACTTACTGAAGTTCGGTACAGTATCATACTACTTAGGTTAC
AACGCAATGCAGGATTTCTTTCCAACAATGATTATGAAACCCAACCCGCA
TTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTACCAGGAGAAGT
TAGCAAAACAACCGAAGGAAGAAGGCGTTaaagaaactgaagaagaagaa
attgttCACGAAGATAATGAATGGGGTATTTCATTGGTCGACGAGTCATC
CGATTTACGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTCGT
ACGCATATACTAAACCTGCAGAAACAACAGAAGAACAGACTGAACCAGCC
TCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGTCTAGAGGATTT
AATGagacaaatgaaacaaatttagttcttttttagatttaatttacgaa
aaaatcttcttttttaatttttttaagggGGTTGGGtctcttctttattt
ttttttgcaaaaatcaacaGAAGCGAGGCGTGATCTTCTAGCTTTGAACA
ATTCATACCTTTTTCGCCCGGGCTTTTTCgtcaaaaagtctttgaaatCC
GACGTCGGAAAGTAGAAAACATTTATCTTTCGCTAGCTTTAataattatt
gaatttgaatttttgaaccaaatttttaaatttctttttattttttatgt
acTTAAGTGgtataaattttatttattatacaaTACTGAACAATGAAATT
AAAAcagaaaatca

Run BLAST on NCBI

transcript from alignment at sc0000170:49107..61029-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00013591 ID=TCONS_00013591|Name=TCONS_00013591|organism=Clytia hemisphaerica|type=transcript|length=11923bp|location=Sequence derived from alignment at sc0000170:49107..61029- (Clytia hemisphaerica)
AATATAATTAATAAAGAAATAAAGAAAAAAGCAAAATGGCAGAAAATACT
ACAAAAAGAGAGAAAATTGCCCAGATGTCTTCTGAGGTTGTGGATAGTAA
TCCATATAGGTATATTTTATTATTTCATCTTGTCTTTCTATCATTAATTT
GTCTTATAATTTAGCATATTTTGGTGCACGTGCTACTGTACTTGATCAGT
TTTGTTTTTAGGAAGCTCTAGTCTACAGCTATTGGCTTTTATAGTTATAA
ATAAATTTTTGGTTAACGTGTATGTCTGTTTTCTTCAAAAGTTGTCTTAT
GATTGTGACTATCTTCTGGGTTATGTCTGTTTATAACCTTAGTTAAAAAT
CTATTATCAATCCTTACAACACTTTGGTTTTTTTTATAAATTGTGATTAG
TTTTACTTCTTTAGTTGTTCTTTTTCTTCAATTACACTCGACTTTAAAAA
TCATTAGATATATTAGCACAGTTTAGTGGCCAATATACCCAATATACTAT
AATCCTGTACAATTTTGTAATGGTTCAAATTTTCTCGCAAAACAGAATAT
CAGAGACTATATCAGGCTTATACTTTGTTAAAATTGTAAGAACAATCGAG
CTCTAGTTTTTTCATTTCAAGATAATCCACTTTTTTGTTCAAAAAACTCA
ACATGATTTTTTTTTAACTTTCAGTCGTTTGATGGCTCTGAAAAGGATGG
GAATAGTTGATAATTATGAGGTAGGGCATCATTTAAAAAATTTATACGTC
AAAAATAAAATGTATAAAAGGAACCAAGAAATTAAATTTTATATAACCTT
GCTATACATTCTTTTCAGTTTTGATTATTTGTCATATTTGCAAGAAAAAT
GTAGAAATGTATAAAATCGGAACACGAAATGATAAAAACGTTTTCTAAGA
AAGTGGGAAAATATTGATTTTAAGTCATGTGGCTTTTTTATGATCATATT
ATGATTTAGTCAAACATACAGCAATGCACAAAGTTCATTTGTCTCGTCTT
TATCATTCCGTTCTTCACAATTTGGAGAATCCAGGTTTATTTTTGTGTAG
GATTAAGTTTCCTTCTGAAATTTAAAAAATTTTAATTTAAAGATCCAAAT
TTACAAAAAGTTATTCCCCTCTTTTTCAGCGTATTCGTGATTACAGCATT
GCAGTAGTTGGGATTGGAGGTGTGGGCAGTGTAACTTCAGAAATGTTGAC
CAGGTGTGGTATAGGAAAGGTAACGTAATGTGTTTTTAGGTTAGATATTA
AAAAATCAAATCAAATATTTAAAAACAAGCTCTCCTAGGATGATATAGTG
CAATACTTTTACTTAAAGGTTTTGTTTTTAAATAAGAGTGATCGTTTGCT
TATTCATCAATTTTAATTTACAAGCTATTTCACATTGGATTGACACGGAT
GTGGAGCAAGATGATTAAAAAGAGGGAAAGAAAAACAGTTTTTATATCAG
CACAAGATAACAATAGGCAGACACTGTCCTGATATGAAATATGTGTCTCA
TATGAAACGGGAACACTTATGTAAAAATAAAACCTTTAAAATAATTACAT
TTTNCCAGATGTCTTCTGAGGTTGTGGATAGTAATCCATATAGGTATATT
TTATTATTTCATCTTGTCTTTCTATCATTAATTTGTCTTATAATTTAGCA
TATTTTGGTGCACGTGCTACTGTACTTGATCAGTTTTGTTTTTAGGAAGC
TCTAGTCTACAGCTATTGGCTTTTATAGTTATAAATAAATTTTTGGTTAA
CGTGTATGTCTGTTTTCTTCAAAAGTTGTCTTATGATTGTGACTATCTTC
TGGGTTATGTCTGTTTATAACCTTAGTTAAAAATCTATTATCAATCCTTA
CAACACTATGTTTTTTTTTATAAATTGTGATTAGTTTTACTTCTTTAGTT
GTTCTTTTTCTTCAATTACACTCGACTTTAAAAATCATTAGAGATATTAG
CACAGTTTAGTGGCCAATATACCCAATATACTATAATCCTGTACAATTTT
GTGATGGTTCAAATTTTCTCGCAAAAAGGAATATCAGAGACTATATCAGG
CTTATACTTTGTTAAAATTATAAGAACAATCGAGCTCTAGTTTTTTCATT
TCAAGATAATCCACTTTTTTGTTCAAAAAACTCAACATAATTTTTTTTTA
ACTTTCAGTCGTTTGATGGCTCTGAAAAGGATGGGAATAGTTGATAATTA
TGAGGTAGGGCATCATTTAAAAAATTTATACGTCAAAAATAAAATGTATA
AAAGGAACCAAGAAATTAAATTTTATATAACCTTGCTATACATTCTTTTC
AGTTTTGATTATTTGTCATATTTGCAAGAAAAATGTAGAAATGTATAAAA
TCGGAACACGAAATGATAAAAACGTTTTCTAAGAAAGTGGGAAAATATTG
ATTTTAAGTCATGTGGCTTTTTTATGATCATATTATGATTTAGTCAAACA
TACAGCAATGCACAAAGTTCATTTGTCTCGTCTTTATCATTCCGTTCTTC
ACAATTTGGAGAATCCAGGTTTATTTTTGTGTAGGATTAAGTTTCCTTCT
GAAATTATTGAAATTCTAATTTAAAGATCCAAATTTACAAAAAGTTATTC
CCCTCTTTTTCAGCGTATTCGTGATTACAGCATTGCAGTAGTTGGGATTG
GAGGTGTGGGCAGTGTTACTTCAGAAATGTTGACCAGGTGTGGTATAGGA
AAGGTAACGTAATGTGTTTTTAGGTTAGATATTAAAAATCAAATATATAA
AAACAGCTTTTAATTTACAAGCTATTTCACATTGGATTGGCACAGATGTG
GAGCAAGATGATTAGAAAGAGGGGAAGAAAAACAGTTTTTATCAGCATAG
TATAACAATAGGCAGACACTGTCTTGATTTGAAATATGTGTCTCATATGA
AATGGGAACACTTATGTAAAAATAAAACCTTTAAAATAATTACATTTCGA
TGATAACATTTTAAAGGTCGTTTTCAGGTATTCAATCATCGAATTTTAGA
TTTTTTACAATTTTAGATTTTATGACTGGGCTAATCAATAACAAATTTAA
TCGAGGTGTTAAATTCTTTTTGGAAGCTCTCAATCCCCTAGACTTTGATA
AATTTATTACTGATCCCAGCATTTCCAAAGAAATACTGAAAATACTCTCA
AGCTATACTTTAACTTTTCCTCTACTTTAGCTAATTATGTTTGATTATGA
CAAAGTAGAACTTGCAAATATGAACAGGTATGTCTGCTTTCTAATCAAAA
TGCAAGGTATATACCCCTAGTCTCTTTCAATTTCTATCTTTTAAAGTTAA
GTATCCAAGGTTGCAGAAAATGGTTGCTATCAACTTTTTATCAGAGTATT
TAACTTTTCTTCTGATTCTAGACTGTTTTTTCGACCTGATCAATCTGGGA
TGAGTAAAGTTGACGCAGCTGTAAATACGTTAAGGTTTGGAATTTTTTAT
TGAAGACCAAAATATTCTATCTGTACTCATGGGTAATCACCTCATGTTGG
TTAAAATTTTGGAGGTTTTTGCGTCTAACCAACAGCAAGCCGTTATGAGG
GCGCAATCAGTCCTGATTACTAATGATTCATTTGAAATGATCCTATATTT
TTCGTATATTTTTCATGATTCAGCACTACTATAGGCTGCACGCAGCCCCT
CTGATATGTTTTGATATAGGGGCTGAGTGTCGTGTATGAAATCCTCCTCC
GAGAGTTACCCCCGTCTTTGTGTTTTTGAATTTTAGAAACTTGATTAGCT
TGTGATTTTCAATACCCGTCGCCGAAAAAAAAATCTCATCATAATTAAAC
TTCTTATACGCCTCAAAGAGTTGAAAAACCTCTCTAAATAATCGAAATCT
CATCGTTTGACTTTTAATAACAGTATTTTTCATTCCCTGTTTTTAGGGAT
ATAAACCCTGATGTAGAGTTCGAAGCACACAATTACAATATTACAAGTGT
AGATAATTTCAATCATTTCATGGGCAGAATAAAGTAAGATAAGTATTGAT
TTATATTTATTTATTTATATGTTGTGTTTGTTTTAAAATTTTGTTTTGAA
ACACCAAAAATGGTTTTTAGTAATTCTTTTCCTAGGCCCTTAAATCTGGC
TAAATGTTTTATCTGAAATGGTCAAAGTACACTTGACACGTTTTTTTAGA
TCAGGTGGCTTGAACGGAAAGCCAGTCGATTTGGTATTGAGTTGTGTTGA
TAATTTCGAAGCAAGAATGGCTATTAATACTGTAAGTAAGATCTATTTTT
CTGTTCTAGTTTTCCATCGTTTACCCCGTGAAATTAAATTAATTAATATT
TCTCGTGAATTCCCCTTTCAAAAGGTACTCTGGGCTTACAAGACTTCTTC
CGTCTCCAATATTTTATAATAGGAATAAAATTAAAATATTGTTTTTAAGG
CGTGTAATGAAATCGGTCAAGCATGGATGGAATCAGGGGTCAGTGAGAAT
GCTGTATCAGGACATGTTCAAGTCATATTACCTGGTGAAACAGCTTGTTT
TGCTGTAAGTAGTCTATATGTCACCATCTGCACAGATATCTTATTTAAAA
CACTAGATGGAGCCACTCTGTTGCTGGCTGAAGTAAAACAATGCACAGTA
TTTAAAAGTAGACCACAGCAACTGTGCTATTAGCCAGGAGTTTGACCATC
TACCCATTCCATGCTCTGTTTGCATTTCTCGACTTCAATTATTGTGAAGT
CGAACAAAAACATCTTTTTCTTAGCACTACTGAAAAAGGCCAGAAAAGGC
TCGATTTTGGTCAAGATAAGAACATACATGGCGCGAGGATCATCGCCCCA
GAACAAGTATCGCGTTTTCGACTAATTTAAGCCTTTTACCTGCTTTTACA
AATATTTGGAGATATCGATGTATTTACTTGAACTGTCGTTTGATCGAAGA
CAATTAGTCCAGAACTCATACCTAAAAAGCCTTGGGGCGTTTTATGCCTA
AATTACTTATCGGCCTTTTTACGCAGACCCTAATTTAGCGCCGGCCCCTA
TTAGGCCAAAGCTAAATTTTTAGCCCGATTCCTTACGCCGCCCCCTATTA
CGCCAGTGACGAAAAAGTAACGCCATTAAGGACCGGATTAAGAAATGGCT
GATAAAATAATAATGATAACTTGTAATTTCGATTTTTAAAAGACAGTTTA
TATTGATTGTCTTTGGGACATAATGGTGAATTCTTGATTTATTTTTACTA
GTGTGCACCACCGTTAGTAGTGGCATCAAACATTGATGAGAAGACATTGA
AGCGTGAAGGAGTATGTGCTGCTTCTTTACCCACCACCATGGGAATTGTT
GCTGGTTTCCTCGTACAAAATACACTAAAGTAAACAAGTTTTCATCTTTA
TGTTTCTACTGTAAATTTTAAGTTGAATCGTAGCTTTCTAAAAGTTTTTC
ACCTTTAAATATTACTCCCATAAGTCACTGCACGCCTACTAAAGTCTGTT
CACGATAAGTGTGCACTCTTTTTTCTTTTATCTATAACTTTTGAAGGAAT
TCTTCAATCTTTATAAATTTGGTATTATTGGAAAGATATCAGTGAGTGGA
ACAATTTGAAATAAAAAAATCTTTTAAAAAATTCTAAAAATGAAGATGAA
AATGAAGAAGAAAAAAATGAAGATCTTATAGAAAAGTGCTATAACTGTCA
TTTTCACTGAAGTGAATCCTTGATCATCGAACATTATCACTGAAAAAATT
TCTCAAAAATAATTATTTTGTCAAAAGATATCAAACAAAGTTATAAGCTG
ATTGACGTCTAAAAACGCTGTTTTCTGCTGTTTTCTGCTTTTTTGGGGTC
AATCACTTATTAACTTTGTATCATAACTTTATATTGAATGAATATTCTAG
TGAAATTTCTTCACACTGATAACCTCCTAAGATCAAAGAATCTCTCCAGT
GAAAATGAAAGTCAAAGCCCTTCTCTACAAGATCTTCATTTTTTTCTTCT
TCATTTTCATCCTCGTTTTTAGAATTTTTTCAAAGATTTTTTTATTTCAA
ATTGTTTCACTCACTGATATCTTTCCAACAATACCAAATTTATAAAGATT
GAAGAATTGCTTAAAAAGTTATAGGTTAAAGAAAAAAGAGTGCACACTTA
TCGTGAATAGACTTTAGACCTGTAGATTTGGAATGCCATGAGTTGAAGTA
ATTATTTTTTCGCCATTCAATGACTTATACATCTACTTATTTTTGAATAA
TTGTAAAAAACCTTGGACCTCAAAGAATATTATTATAGTGTGTTTATATT
TTAATGACCTGTTTAGTTGCCTTGAGAATTTATTAGCAAATAATTACCAT
AAGCAGTACGGCACGATATCCTATATTTAAGGACCTTATATTTTTAGAAC
CGTCCTTATATAGGGATGTCCTTATATTTAAGGACCTTTTTTCTACTGGA
TCGATAAAAACCCGATCTAGTAAGCAAAGGTCCCTATTTATGGGGACGTC
CTTAAATATAGGTCCTCTCCCGTACAGATAAGGGAACTAATTTAGGCGAA
TTTGGCGAAATATTCAACCAAAATTGAAATAATTGCTGGCTCTGGCTTTC
AGTGTAAAGAAACTGATTTGCCATACCATTCGCCAAACTTAGTTCTCGCC
AAAAATAAAATTGCGTTTCTCATCAAAATGATTTCTTTTTAAAAATTTCC
CGGATACTGTTTTCCGATACCCTTCACACGTATTGATTTCTCTAAAATGG
TGGCTTCTAGGCTACGCCATCTTCCTTCGTTTCGAGCGTAAAACTTCTAC
TCTTCGGGATATGCTCGCAGCTCTTGTTTTGAATATTTCTCCGGATACAT
CGCATGCGCACTGAGGTTGTAAAGGAACAATCGAGAGTTTCGAAACCTAA
ACCAATCAGCTGTGTTTCAAACATTCTTTTATTTGAAACCTCTATTGATA
AACATCTTTTGTTAAAGTTTTCTATTATTTTTAAACCTAGTAATAAGCGA
ATTTCCGGTGGGGGTCACTAGTTGCCTCCCATAGCAGTGCCTATAGACCA
AGAGTAAGGCCTAAAAGCCTGTAGCTGTCTATTGTTTAGACTAGGTTGCT
TTTCAATCACAAGATAGTTATGATATATCATTGATTTTCAAATTCTTGTT
TGCATATCTTTTCAGATACTTACTGAAGTTCGGTACAGTATCATACTACT
TAGGTTACAACGCAATGCAGGATTTCTTTCCAACAATGATTATGAAACCC
AACCCGCATTGTGATGAAAGTTTCTGTCTCAAACGACAACAAGCGTACCA
GGTGAGCCAGGGCGACCCCCCCCCCCAAGGGCCCCCCCCCCCCCGTCCCC
TAGAAAGGAGGGTACTTAAAATCTTCCAAAAATAGGCCTTATCGAAGTTT
TTGATTTTTCTAAAAAAATCGATGCATTGTGGGATTTTTTCGAGTGTATT
ACAATAGAAATCTCTTAGGAATTCATCGAGGGAATTCTATTGTAATACAC
TTGAAACAATCCCACAATGCATTGCTTTTATAGAAAAATCAAGGTCTATT
ACTAAAAGGCAGGGTAAAGAACAAAACAAACTGTACCAAAGATTGTTATT
TTCGAAAGTCTGTCCTTTTGGGATCAAAAAAAGCTGGAATGGATTTTTTT
GGGGGTAGGTACATTATGCACTAAGTGGAGATTTAAGTTGTAAATTTATT
AAGGTATGGATGGATTTTTCAGGGAAACCCAACTACGCACAAAGGGGAGT
GTTTCTACGGAAACTGTAATTTTTCAACAGAATGCTATGATAGAAAAGAA
ATTCATGATATGCACCATTGCAATGTCTTCCATTCCACCCAATAGCTGAT
TGGTTGTAAGTGACGTATTGACTGATTTTACGTCACTTACAACCAATCAG
CTGTTGGGTCCGTGATGTAATGTCAGAAGACATTGCAGTGGTGCATATCA
TGAATACCCCATTTCATTCACAGTCGAAATGAATCATGGGTAATCAGGAC
CACCACGCTCCGATAAGGACTTTCAATTGGTCTAAATTTTAGGATGTTTT
TGTGTCTAGCCAACGAAAAGCTGTTATGGAGGCGCAATCATTCCTGATTA
CCCATGATTCATTTAGACTGTAAAATGGCTTAGAGAGGCCTTTAATATAT
CCTTTTCTAACTTTTAAACATAACTTTTTTATTCTTTACTTTACCTCACA
GGAGAAGTTAGCAAAACAACCGAAGGAAGAAGGCGTTAAAGAAACTGAAG
AAGAAGAAATTGTTCACGAAGATAATGAATGGGGTATGTAAAGTCTACTT
CACTAGCAGGGAACAATAGCAAAGACTGTAATACTTTCGTTATAGTTTGT
ATTTGAATAACATTCTTCTGATCGTTGAAAATATTTTTGTAAGACCTTTG
AAGTAAACCATTTTTCCTATGTCTGTAAATATTAATCTGTGAGTTCCCAC
GCGGTTTATTTTAAACATGGCAAACTGCTTCTTTGTCTGTACACCCAGTA
TCTACAGCTAATTCCAAAATTCATTGCCGTAGGGGATAAACGTACTCCGT
ACTACGAAGCGATAAACGTGAGATACACTCTGGTACATAGTAACTGCTTC
TATGCTTGGTGTTTAATAGGATTTTTAATGGTATTAAAAATCTTTCCGAA
GATAGTTAAAGAAGACTCTTTCTCCCTGGATTGCTCTACCTACCCTTAAT
CATTCTCTTAGTTGCTAAGCATCAAGCAGAGAGGCGTCAAAGTACCATTT
TGGGAATCTTTGGTATGATCCGGCTGGGGGTCGAACCCACAACCTTGCGC
ACCGTAGCCGGGTGCTCTACCACTGCACTACGGTCTGAATAAACTGAAAC
ATATTTAATGTACCTTTTACTTGCACTTTTTAATCACCATAGGTATTTCA
TTGGTCGACGAGTCATCCGATTTACGGGAGGACACACAACTACAAGAATT
GACTACTGGACTTTCGTACGCATATACTAAACCTGCAGTGAGTCCTTTCT
ATGTATTAATGCTGACAAGCTTGATAAGATACTACCATTTTTAATAATTT
ATTTTAAAAGCGAAATGCTTTGTCAAGAGACACAATTCAGTTTTTTTTCT
AACAAGCAAGTTTTAAAGTGTATGAAATGATAAACAAAATTTAAACCTTT
CCATATTATGTAACCTTTTTCAACGGAAAAAAGGAAAAAAGGCCAAAGCC
AAAATCTCCAACTAAAATCCAATTAAAAATGTCGATGATGTTATTAGCCC
TGGGTTCGAGGGTGGGTTCTTTGTTTTGTAAAATTCATGATATGTACCAT
TACAATGTCTTCCAAGTACCCATTAGCTGATTGGTTGAAAGTGACGTAAA
AAGACTAAATTGATTGATTTTACGTCACTTACAACCAATCAGCTGTTGGG
TCTTTAATGTAATGTAAGAAGACATTGCAATGGTGCATATTATGAATAGG
GACCTTTAGCATCTAGGACGGCAGGATTGAACAAAAATGCCCTTGGGATT
GATATGTGGATCGCAGCTAGATTCTTANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAC
TTTTTTATTCTTTACTTTACCTCACAGGAGAAGTTAGCAACACAACCGAA
GGAAGAAGGCGTTAAAGAAACTGAAGAAGAAGAAATTGTTCACGAAGATA
ATGAATGGGGTATGTAAAGTCTACTTCACTAGCAGGGAACAATAGCAAAG
ACTGTAATACTTTCGTTATAGTTTGTATTTGAATAACATTCTTCTGATCG
TTGAAAATATTTTTGTAAGACCTTTGAAGTAAACCATTTTTCCTATGTCT
GTAAATATTAATCTGTGAGTTCCCACGCGGTTTATTTTAAACATGGCAAA
CTGCTTCTTTGTCTGTACACCCAGTATCTACAGCTAATTCCAAAATTCAT
TGCCGTAGGGGATAAACGTACTCCGTACTACGAAGCGATAAACGTGAGAT
ACACTCTGGTACATAGTAACTGCTTCTATGCTTGGTGTTTAATAGGATTT
TTAATGGTATTAAAAATCTTTCCGAAGATAGTTAAAGAAGACTCTTTCTC
CCTGGATTGCTCTACCTACCCTTAATCATTCTCTTAGTTGCTAAGCATCA
AGCAGAGAGGCGTCAAAGTACCATTTTGGGAATCTTTGGTATGATCCGGC
TGGGGGTCGAACCCACAACCTTGCGCACCGTAGCCGGGTGCTCTACCACT
GCACTACGGTCTGAATAAACTGAAACATATTTAATGTACCTTTTACTTGC
ACTTTTTAATCACCATAGGTATTTCATTGGTCGACGAGTCATCCGATTTA
CGGGAGGACACACAACTACAAGAATTGACTACTGGACTTTCGTACGCATA
TACTAAACCTGCAGTGAGTCCTTTCTATGTATTAATGCTGACAAGCTTGA
TAAGATACTACCATTTTTAATAATTTATTTTAAAAGCGAAATGCTTTGTC
AAGAGACACAATTCAGTTTTTTTTCTAACAAGCAAGTTTTAAAGTGTATG
AAATGATAAACAAAATTTAAACCTTTCCATATTATGTAACCTTTTTCAAC
GGAAAAAAGGAAAAAAGGCCAAAGCCAAAATCTCCAACTAAAATCCAATT
AAAAATGTCGATGATGTTATTAGCCCTGGGTTCGAGGGTGGGTTCTTTGT
TTTGTAAAATTCATGATATCTACCATTGCAATGTCTTCCAAGTACCCATT
AGCTGATTGGTTAAAAGTGACGTAAAAAGACGAAATTGATTGATTTTACG
TCACTTACAACCAATCAGCTGTTGGGTCTTTAATGTAATGTAAGAAGACA
TTGCAATGGTGCATATTATGAATAGGGACCTTTAGCATCTAGGACGGCAG
GATTGAACAAAAATGCCCTTGGGATTGATATGTGGATCGCAGCTAGATTC
TATTCTTTTCATATCAATTTTCTCATGAGAATAGTGAATTTTAATAGGGT
AATTTTCAAATCTCAAGACGATATGAAAATTCTTTTCTGACGTCGTCTTT
GAGAAGATGGTAAAGGAAGAGTGCAATAGTTTTTAATGATATGAATCACT
AGAGAATTATAACGTGATCTACAAAAAAATTGACTATATTTCAAATTATA
GTTAATTCTAGATAAAATCGGATAAAATTTGCCGTTTGATTTAAGATTTA
CTTCACGTCCCTAAAGGTCCCTAATATTGTGTCCGTTACAGACGGAAATT
TGATCCGAAGATCTTATATTTTCGGACAGAGCTTGTTTTTTCGGAAAATG
AAGTTAATTCCAGACTTCTTTTAAGATGTCTTACTTTAAAATATCAACCG
AACTCTAAAGCAAAAACTAGAGCGTACATTTCTATGGAAATTTGGAAAGT
TTTTCTGGGTAGTGAGAAAGTTGAGTAGCATTACAGTACCTTTTATATAA
GTTCTATAAGTTCTTTCTTTATCCCATAGGAAACAACAGAAGAACAGACT
GAACCAGCCTCTACGACTTCAACGACCGAAGAAGGTGGCGAACAAAGTCT
AGAGGATTTAATGAGACAAATGAAACAAATTTAGTTCTTTTTTAGATTTA
ATTTACGAAAAAATCTTCTTTTTTAATTTTTTTAAGGGGGTTGGGTCTCT
TCTTTATTTTTTTTTGCAAAAATCAACAGAAGCGAGGCGTGATCTTCTAG
CTTTGAACAATTCATACCTTTTTCGCCCGGGCTTTTTCGTCAAAAAGTCT
TTGAAATCCGACGTCGGAAAGTAGAAAACATTTATCTTTCGCTAGCTTTA
ATAATTATTGAATTTGAATTTTTGAACCAAATTTTTAAATTTCTTTTTAT
TTTTTATGTACTTAAGTGGTATAAATTTTATTTATTATACAATACTGAAC
AATGAAATTAAAACAGAAAATCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_007592	XLOC_007592	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000170	supercontig	sc0000170:49107..61029 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.00108211	0.000195726	1.17913	0.000541123	1.65678	0.644605	4.36985	0.11813	0.0774134	0.474272	0	0	0.0799028	0	0	0	0	0	0	0	7.12666e-05	0.505823	0	0	0	0

Blast

[Close]

BLAST of TCONS_00013591 vs. Swiss-Prot (Human)
Match: UBA5 (Ubiquitin-like modifier-activating enzyme 5 OS=Homo sapiens GN=UBA5 PE=1 SV=1)

HSP 1 Score: 466.848 bits (1200), Expect = 7.620e-161
Identity = 259/376 (68.88%), Postives = 306/376 (81.38%), Query Frame = 3

Query:   57 REKIAQMSSEVVDSNPFSRLMALKRMGIVDNYERIRDYXXXXXXXXXXXXXTSEMLTRCGIGKLIMFDYDKVELANMNRLFFRPDQSGMSKVDAAVNTLRDINPDVEFEAHNYNITSVDNFNHFMGRIKSGGLN-GKPVDLVLSCVDNFEARMAINTACNEIGQAWMESGVSENAVSGHVQVILPGETACFACAPPLVVASNIDEKTLKREGVCAASLPTTMGIVAGFLVQNTLKYLLKFGTVSYYLGYNAMQDFFPTMIMKPNPHCDESFCLKRQQAYQEKLAKQPKXXXXXXXXXXXXXXXXXXWGISLVDESSDLREDT---QLQELTTGLSYAYTKXXXXXXXXXXXXXXXXXXXXXXXXSLEDLMRQMKQI 1172
            R +I +MSSEVVDSNP+SRLMALKRMGIV +YE+IR +++A+VG+GGVGSVT+EMLTRCGIGKL++FDYDKVELANMNRLFF+P Q+G+SKV AA +TLR+INPDV FE HNYNIT+V+NF HFM RI +GGL  GKPVDLVLSCVDNFEARM INTACNE+GQ WMESGVSENAVSGH+Q+I+PGE+ACFACAPPLVVA+NIDEKTLKREGVCAASLPTTMG+VAG LVQN LK+LL FGTVS+YLGYNAMQDFFPTM MKPNP CD+  C K+Q+ Y++K+A  PK       EEEEI+HEDNEWGI LV E S+         + +L  G++ AYT        + +  S T  T E   +SLEDLM +MK +
Sbjct:   37 RVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVAGILVQNVLKFLLNFGTVSFYLGYNAMQDFFPTMSMKPNPQCDDRNCRKQQEEYKKKVAALPK--QEVIQEEEEIIHEDNEWGIELVSEVSEEELKNFSGPVPDLPEGITVAYT------IPKKQEDSVTELTVEDSGESLEDLMAKMKNM 404

The following BLAST results are available for this feature:

BLAST of TCONS_00013591 vs. Swiss-Prot (Human)

BLAST of TCONS_00013591 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
UBA5	7.620e-161	68.88	Ubiquitin-like modifier-activating enzyme 5 OS=Hom...	[more]

You are here

TCONS_00013591 (transcript) - C. hemisphaerica