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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013584 ID=TCONS_00013584|Name=TCONS_00013584|organism=Clytia hemisphaerica|type=transcript|length=988bp
CCTTATACCAGTCGCCTTCCTTATGCGAATTACATGGATAGAAGTACGTA
TTATTGAAGAAGTGATTACAATAAAGTGCATTGAAAATACAATGGACACC
ATCCTCAACATTTGCACCTTGATTTTGAACCAAAGATGAGACAGGACCTC
CTTCAAACCAATTATAAAATCCACCACGATAAAAACAATCAGACGCTTGA
TCTTTAGGTAGCTTGTCGTAGAGATGTGCATCATTTTCACCCGTTTCTTG
AACGGCGTGCGCAAAAAATGCAGCCACATCGCGACGAAAGGTCTCATTTG
CGGTATAATCGGTATTTAGTTTAGTCCCGTTCGGGTTCTTTGTAACGTAT
TCATTACCAAATTTCGGGAAATATCGGGCTGCTATTTTGAAGGCTTCGTA
ATTGTATGGGGAGCATTTATCTGGTCCCCAACCGAGATTCGATTTCGGGA
AAAGATCATTGAATACGCTTTCAGTAAACCAAGTTTCGATTCCTGACGGA
GGACGTTTGTTTGGGTCCGATGGTTCAACGCACGGCTTGACAGGGCCATG
ACCAAATTTCTGTGGGTCAGGACATTTGATAGCATTCGTTTGGTGGGTAG
ATGAAAAGACTCCTAAAAAAGGAAATagttatcttttttttaagtCATTC
AAAAGAAGAAATCTGTTCAACATCACCATGGATATCTTGTTAGTTAGGTA
AACAGAAATCTTTCCGAGAAGCACTTCAAAAACAAACAAGTTTCGACCTC
TGAGGGGAAAAGGTTTGTATAGAGTGGGTGTCATTGCGCTACTGtcctaa
agaggaaaaattcGATTGGATAAAACAAAAGTAAGATAACCTAATAACCT
AAAATCCCTCATAATTTGATTAAAACTTAAAGTCAAGTAGaattatgttt
tttatttgaaaaagaaatgttAATTGGCTAAAACAGGTTCCTTGTCACAT
GTCCAGAAATATAATTACGCCCACAAAGTAAATACCAT Run BLAST on NCBI transcript from alignment at sc0000170:449798..450861+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013584 ID=TCONS_00013584|Name=TCONS_00013584|organism=Clytia hemisphaerica|type=transcript|length=1064bp|location=Sequence derived from alignment at sc0000170:449798..450861+ (Clytia hemisphaerica)
CCTTATACCAGTCGCCTTCCTTATGCGAATTACATGGATAGAAGTACGTA
TTATTGAAGAAGTGATTACAATAAAGTGCATTGAAAATACAATGGACACC
ATCCTCAACATTTGCACCTTGATTTTGAACCAAAGATGAGACAGGACCTC
CTTCAAACCAATTATAAAATCCACCACGATAAAAACAATCAGACGCTTGA
TCTTTAGGTAGCTTGTCGTAGAGATGTGCATCATTTTCGCCCGTTTCTTG
AACGGCGTGTNCAGTCAGCCGCTTGATCTTTAGGTAGCTTGTCGTAGAGA
TGTGCATCATTTTCACCCGTTTCTTGAACGGCGTGCGCAAAAAATGCAGC
CACATCGCGACGAAAGGTCTCATTTGCGGTATAATCGGTATTTAGTTTAG
TCCCGTTCGGGTTCTTTGTAACGTATTCATTACCAAATTTCGGGAAATAT
CGGGCTGCTATTTTGAAGGCTTCGTAATTGTATGGGGAGCATTTATCTGG
TCCCCAACCGAGATTCGATTTCGGGAAAAGATCATTGAATACGCTTTCAG
TAAACCAAGTTTCGATTCCTGACGGAGGACGTTTGTTTGGGTCCGATGGT
TCAACGCACGGCTTGACAGGGCCATGACCAAATTTCTGTGGGTCAGGACA
TTTGATAGCATTCGTTTGGTGGGTAGATGAAAAGACTCCTAAAAAAGGAA
ATagttatcttttttttaagtCATTCAAAAGAAGAAATCTGTTCAACATC
ACCATGGATATCTTGTTAGTTAGGTAAACAGAAATCTTTCCGAGAAGCAC
TTCAAAAACAAACAAGTTTCGACCTCTGAGGGGAAAAGGTTTGTATAGAG
TGGGTGTCATTGCGCTACTGtcctaaagaggaaaaattcGATTGGATAAA
ACAAAAGTAAGATAACCTAATAACCTAAAATCCCTCATAATTTGATTAAA
ACTTAAAGTCAAGTAGaattatgttttttatttgaaaaagaaatgttAAT
TGGCTAAAACAGGTTCCTTGTCACATGTCCAGAAATATAATTACGCCCAC
AAAGTAAATACCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013584-exon-sc0000170-1491911889:449798..450004 | TCONS_00013584-exon-sc0000170-1491911889:449798..450004 | Clytia hemisphaerica | exon |
| TCONS_00013584-exon-sc0000170-1510915933:449798..450004 | TCONS_00013584-exon-sc0000170-1510915933:449798..450004 | Clytia hemisphaerica | exon |
| TCONS_00013584-exon-sc0000170-1575043694:449798..450004 | TCONS_00013584-exon-sc0000170-1575043694:449798..450004 | Clytia hemisphaerica | exon |
| TCONS_00013584-exon-sc0000170-1491911889:450081..450861 | TCONS_00013584-exon-sc0000170-1491911889:450081..450861 | Clytia hemisphaerica | exon |
| TCONS_00013584-exon-sc0000170-1510915933:450081..450861 | TCONS_00013584-exon-sc0000170-1510915933:450081..450861 | Clytia hemisphaerica | exon |
| TCONS_00013584-exon-sc0000170-1575043694:450081..450861 | TCONS_00013584-exon-sc0000170-1575043694:450081..450861 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000170 | supercontig | sc0000170:449798..450861 + |
Blast
The following BLAST results are available for this feature:
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