TCONS_00013496 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013496
Unique NameTCONS_00013496
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3990

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013496 ID=TCONS_00013496|Name=TCONS_00013496|organism=Clytia hemisphaerica|type=transcript|length=3990bp
ACCTGCTCAATGTCCAGATGGAAAATTTAGCCCTGGAATTTGCTCAGATT
GCATTGATTGCGCTGCTGGGTTTAGCTGTAAATCTGGAATTGTTTATTGT
CCAAATGAAAATACAACAGCTCCAGTGCCATGTCCTCTAGGAACGTTTGC
TAATGAATCTAATGCAATCCAATGTAATGATTGCCCTATCGGTCACGCTT
GTAGTAACACATCCATAACACCAGTGCTTTGTACCGATGGAAGTTATAGT
TTAGGAAAAGCAAGTGAATGCACACAATGCCCAGCTGGAAGAAGCTGTGT
ATCTGGTAAGATTTCAAGCTGCCCTAAAGGAACTCACTCAAATGTTGGTC
AATCCTCTTGTGCACCATGCACAATAGGAAATTATTGTCCAAATGAAAAT
ACAACAGCTCCAGTGCCATGTCCTCTATGGACATTTGCTAACGAATCTAA
TGCAATCCAATGCACTGATTGTCCAGCAGGGTTCCAGTGTAGCGACACTT
CTCTAACTCCAGTGGAATGTGCTGATGGAACTTACAGTCTAAGTAAAAGG
AGTGAATGTGTGCAGTGTCCAGCTGGGAAAAGCTGCACTGATAAATCAGT
GGAACCAGTGATATGTTTGAAAGGTTCATACTCACCTGCTGGTGTAAAAG
ATTGTATACCATGTGGAGTTGGTCACTACTGTCCATCTGACGGCTCCCAT
CAACAATCCCCATGTGCTATAGGCTGGTATGCAACATCTCCAGGGTCTGA
CAAATGTTTGCAATGTGATAGAGGCAATAAATGTCCAGATCCAACCTCAC
CACCAGAACAATGTGGACCAGGTGTCCACCGGGATATTATACAACTGAAA
ATGGGACTGCTCATTGCACCATATGTCCTGAAGGCAACAAATGTCCTATA
CCTCATAATCTACCAATTCCATGCTCAGAAGGAGAGtaCCAACCAGAAGA
AGGGAAAGACTTTTGTTTACCAGTGCCCTCTGGTCTTGTTGTCACAGATG
GAAAAACACCCAAAGAATGCCAGGCTGGTGAATATTCAAATGGTACTGCT
TGTGTTGAATGTCCTAAAGGATTTTACTGTCCCTCTTCAACCACCACCCC
CATTGTCTGCAAAGCTGGTACCTACGCCAATGCATTGTCAAGTACATCAT
GTCAATTGTGTCCCTCTGGTTACTCATGTTTGAACGCTGCTGATGCACCA
GTAGCATGTACCGCTGGAAGTTATAGTGTTGCTGGCCAAATTAAATGCAC
CactTGTCCAACAGGCCAATTCAGTTACAACACAGCATCATCTTGCTCAC
CGTGTCCTGGAGGTTCTTATTGCACTAATGGAACAGCTCCCATTGTCCCT
CCTTTACCATGTGCTTTTGGGTTCTACAGTGTTGTTGGTCAAGGCCAATG
TAAAGAATGTCCACAGCACACATACACGCCTGGTTTTGGAGCACAGTTTT
GCACACCTTGTCCAGTGGGTTCAACGTGCGATGATCCAACAGCCATCCCT
ATACCCTGCTCTGATGGTACTTATTGGTCAAATGCTGACGAGACGCCAAA
ATGTATAGCATGTCCGGCAGGTTATTCATGTGAAGATGCAAAAGTTCCAC
CTGTTCCCTGCAAAAAAGGATTCTATTCCACTGGTGGTAATTCAACCTGT
TTACCGTGTCCTGAAGGTTATTCATGTCTGGATTCCACGCAACCTGTCAG
CTGTAAAATTGGAGAATATAGTTTATCGggtGTTGAGTATTGTACGCCAT
GTCCACCAGGTTTTTCTTGCCCAACACCTAACCAAGCAGCTGGTCCATGT
CCAGCAGGAACCTACTCTTTGAAAGGAGAAGGAACGTGTAATAATTGTTC
CGCCGGGTTCATGTGTCCAAGTACATCTCATGCTCCAATCCAATGTCGAG
TGGGACAGACTGCAAATGGATTACAAAATCAAGTCAACTGTACCAATTGT
TTAGCAGGATTTGCATGTCCTACTGCCGCGTCACCAATGGAAGAGTGCAG
TGCAGGGTATTACAGTTTTAGTGGTGCAACAAAATGTACTTACTGTCCTG
CTGGATACCAATGTCCCACGCGCAATAGTCGACCAACAATTTGCACTCAA
GGAACATTCTCAGTTGGCGGCCAAACAACATGTCATCAATGTTCTGCAGG
ATTCTCTTGTGAATCTATTTATTCGAACTCATCAAAACCATGCCCTGGAG
GAACATACGCAGCAGCTGGCTCATACAAATGCACACCTTGTCCTCAAGGT
TCAAGTTGTCCAGATCCAACTGTCAGCAATGCGGTATCTTGCGATCATGG
TAGCTTTGCTGTCGGTACACAAACAACTTGTACTGTCTGTCCCCCTGGTT
GGGAATGTCCAAAAACTGATGCTTCAGAAAACAAACAGTGCCAATTTGGT
TACTATTCAAAAGGCAATGCCACGTCTTGTACACTTTGTCCAGCTGGGTT
CGAATGTCGAAGAACAGATATTTCTGAACCTGTAGCGTGCAAACCTGGAA
CTTTCTCAACCGGTGGCCAAGTGAAATGTACTCGATGTCCCAGTGGCAGT
TCATGTCCTGATCTCGATAAAGCAACCATCACCCCATGCCCGTCCGGTAG
TTACAGTTTGTCCGGAGAAGCGACTTGTACGGAATGCCCACCCGGTTATG
CTTGCCCCAGTCTCTTTGAACCGTTGATTTTGGCGTGTCCAAGGGGAACG
TACTCGGTTGGTGCCAAGTCGGAGTGTACACCGTGTCCTGCAGGTGAAGA
ATGTAAAAACAATACTCAAGTAGGCGTTGCGTGTTCTGACGGATATTATA
GCTTAGAAGGTTCATACAGTTGCACGCCCTGTCCTGCTGGTTATTACTGC
CCGGTTAAAAACGATCGTCCGAGAATCTGCGAGGCGGGTAAATACAATGA
TCCCATGCGAACGACGTGTCTTGATTGTAATGCTGGATATGTGTGCGTTG
AAGGAAGCACCAAAGCCACACCTGAGATTGGATTATGTCCATTGGGTTCA
TACTGTGAAGATAAAATCAATGCCATCAAATGTCCTTCTGGAACTTACGG
ACAGAAAACGGGCGGAATAAGCGAATCAGATGCCTGTAAAGCATGTCCGG
AAGGTTATTACTGCGAGGCCGGAACACCAGGTTTCCCCAAACACTCGGTC
CGTTGTCCACCCGGTCATTTTTGTCTAGAGGGGACTAAAACCGCTTCTCA
ACACCCGTGCCCGAATGGTTTTTTCAATACGGAAATCGGTGCCGTGAGAC
AAGACCAGTGCAAGGAATGTCTCCCGGGATATTATTGTTCGGGAGGTGAC
CCGACCGGTGATTCATTGTGTCCGACAGGTCATTATTGTCCGCAAAAAAC
GGAATCTTCCACACAGTATCCATGCAGTGCTGGTTATTATACTGAAGAAA
AAGGAGCAACCACGGCGACAGATTGCAAAGTATGTCCAGCAGGTTACTAC
TGTTTAGAAGGTAGTGATTCACCTACAGCGTGCCCTCCAGGAACATACAA
TCCAGTACCGATGCAGGGTGCGGCTTCAAATTGTCGCCAGTGCGAAGCTG
GCTTTGCATGTCCGCTATCAGCATCTACTCAACCAACGGAACAGTGCAGC
GCAGGATATTACTGTCCTGAAGGCTCGTCATCACCTAGTGATCCATTGAA
TGCGTGCCCGGCAGGAACATATACCGATTACCATAATTTAACAGCGGATA
GCCAATGTGACGGATGTCCTGCAGGTCAAGCATGTTCAGCGGGAACTGGA
GGAAATCAGAAACCACCACAACCTTGTGCCGCTGGTTATTACTGTCTTCC
AAGAACCCGCCATCCGAAACAGCACCCATGTCCAGCAGGAAGTTACTCAA
ACTTGACAAACCTTCATAAATGGACTGACTGCACTGAATGCCCGAAAGGC
CAATATTGTTTGGAAGGTGCGGCGGCGCCGAGCGGGATATGCCCCACCGG
TCATTATTGTCCACCAGGTATGCTTCTTGTTTGTTTGAGg
Run BLAST on NCBI

transcript from alignment at sc0000168:148709..161227-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013496 ID=TCONS_00013496|Name=TCONS_00013496|organism=Clytia hemisphaerica|type=transcript|length=12519bp|location=Sequence derived from alignment at sc0000168:148709..161227- (Clytia hemisphaerica)
ACCTGCTCAATGTCCAGATGGAAAATTTAGCCCTGGAATTTGCTCAGATT
GCATTGATTGCGCTGCTGGGTTTAGGTATACATTATTCAATGTCAATATT
TTTGTTGAGCAATCATTTAGAAAACTTATTGTTTCATGCAATCAGATGCA
ATGCATATCATCATCATCATCATTAGATCAAAGTTAAGTTGATTGATCAT
ATCAATGGTACTTTTATTATCTATTTGGACTCAAGTTACCTTCTTTTCTT
TTAAGCTGTAAATCTGGAATTGTTTATTGTCCAAATGAAAATACAACAGC
TCCAGTGCCATGTCCTCTAGGAACGTTTGCTAATGAATCTAATGCAATCC
AATGTAATGATTGCCCTATCGGTCACGCTTGTAGTAACACATCCATAACA
CCAGTGCTTTGTACCGATGGAAGTTATAGTTTAGGAAAAGCAAGTGAATG
CACACAATGCCCAGCTGGAAGAAGGTAATAAATTTTCTTCAAACAAGCCC
ATTAAACTCTCCTTTGAAATCTTTCTGTTTTATGAATTTATACTGTCATT
TCATCATCAATGCTGTTTGAATGTAAAAACTCTTATTATTTTCCTTCTAG
CTGTGTATCTGGTAAGATTTCAAGCTGCCCTAAAGGAACTCACTCAAATG
TTGGTCAATCCTCTTGTGCACCATGCACAATAGGAAATTATTGTCCAAAT
GAAAATACAACAGCTCCAGTGCCATGTCCTCTATGGACATTTGCTAACGA
ATCTAATGCAATCCAATGCACTGATTGTCCAGCAGGGTTCCAGTGTAGCG
ACACTTCTCTAACTCCAGTGGAATGTGCTGATGGAACTTACAGTCTAAGT
AAAAGGAGTGAATGTGTGCAGTGTCCAGCTGGGAAAAGGTATGACTTTTT
GTTTGTTTTTTGAAAAAGAAGTTTGAAGTTTTAAATTTCATTTAAATAAC
TTGTTTAGTCGTTTTTTCAAAAACTTCTAAACTTTAAGTCGCTTTTGAAG
GTAGCTTTTTTTTGATTTTTTTTCTAATAACTTTGTGATATGTTTCTTTT
CAGGTAACTTTTGTTAGCCAGTCAGTTTTAGACAGAAAATGCACCCAATG
ATTTGCTAACAAAACTAATTTAACATTTCACCTTTCGTTTATTTTTTCTT
GTTTCATTTACTTTAATTCTGTTCCATTTGTTTTGGATTCTAGAGTCATT
ACTTAGCAATTTATAACTTTGTGTTCATTTAATGATAGTATAATTCATAT
TTTTATTTCAGCTGCACTGATAAATCAGTGGAACCAGTGATATGTTTGAA
AGGTTCATACTCACCTGCTGGTGTAAAAGATTGTATACCATGTGGAGTTG
GTCACTACTGTCCATCTGACGGCTCCCATCAACAATCCCCATGTGCTATA
GGCTGGTATGCAACATCTCCAGGGTCTGACAAATGTTTGCAATGTGATAG
AGGTACAGTGTATATTTTGTTTCAAAAGTGTCTCTGAATTATGTTTTTAA
TAATAACAGCAATAACATAATAAATACAATGACTTTTAAAAACTACAATA
TTTTTCCACTCCTAGGCAATAAATGTCCAGATCCAACCTCACCACCAGAA
CAATGTGGACCAGGGTACTATGTAGATGCGACTGGATTGACTTCATGGGA
TCATCCCCCCCCAGGAAGATGGGGGGGGAATCAGATTTTGGTGCCAGGGG
GGAAGTGAATTCCAAGCTTGATGGGGGGAGAAAGGCGAATTGGGGGTATA
TTCAGTCCTCCACCTAGTGGGGGGAGTAATAGGATAAATAAAGACCTTCC
TGGTGTGTTTGGGCATTCAGGCTTATGAGCCTGTCTTTCTAGGGATGTTG
AGAGTCTTTTTTTTTTGCTATAGTAGCTTGCGAATTGAGGCGAGTCTGGA
TCATCACTTCGCAACCCTTATACAATACGGCTAGGGGGATTTCCCAATTG
GGGGGAGCACAAATTTTAGAGACAGGTGGGGGGAAAAGGCCAGATGGGGG
ATTTTAGCTCTTATTAAGGGGGACCAAAAAGCTGGAGGACGCCATGGACT
TATTGTGTGCCTGTAGGTCTTTATTTAATTTCTTTCCAAAAGTTTTTAAT
GCTTAAGCTCAAATAGATTTATAAAATTTTATTAGCTCTGTTAACACTTA
TTAATATCTGCTTCAAATATTTTTAAAAGAACACCAATTTCTTTCGATTT
GATTTCAGTGTCCACCGGGATATTATACAACTGAAAATGGGACTGCTCAT
TGCACCATATGTCCTGAAGGCAACAAATGTCCTATACCTCATAATCTACC
AATTCCATGCTCAGAAGGAGAGGTAAACAAGTTCAAATGAATGATTGATC
CTAAATGTTTTTAAGAAGTGCTGCTTATTGTTTGCAACAAGACCTTTGGA
AACAAGACCTTTAGAAACAAAAGTATTTTGATTCTGTTTAGTTGTATTAA
TAGTATAGTCACGCCAGAAATATAAACCATTTTGAAAAAAACTATTGATT
ACTTTATTCTTTTGTTTTTAGTACCAACCAGAAGAAGGGAAAGACTTTTG
TTTACCAGTGCCCTCTGGTCTTGTTGTCACAGATGGAAAAACACCCAAAG
AATGCCAGGTACTTTAGACTTTTTTAATCTTTATACTTATTGATTTATTT
AAGATGCTTTAGCTCAAGCTTTCCCTTTTTAAGCTACTTTGAATAGCAAC
TGAAGTATGTGGACCATTTTGATTGATCTAGCTAGAGGAATTCTGAAGAC
AATGGTGTTTGGAGGGCTGTGAATTTTTCATTACTGTAATTTCCATAACA
CTTTTGTAGGCTGGTGAATATTCAAATGGTACTGCTTGTGTTGAATGTCC
TAAAGGATTTTACTGTCCCTCTTCAACCACCACCCCCATTGTCTGCAAAG
CTGGTACCTACGCCAATGCATTGTCAAGTACATCATGTCAATTGTGTCCC
TCTGGTTACTCATGTTTGAACGCTGCTGATGCACCAGTAGCATGTACCGC
TGGAAGTTATAGTGTTGCTGGCCAAATTAAATGCACCGTAAGATTTTTAA
TGAATTATTATGTCATTTCTGAATTATTTGTACGATACCAAAATTCTAAC
CTTGTTTTTTGCAATTTTGAGAGGCCAAAACATAGTGATTACGACAGTGG
CGCAACCATTTCATACTTATTTTACCTAGGAATTTAGAGTCTTGAAAACT
TGGAAAGGAAAAACTGAAAATTCCTATACCATTGAAAGAAAGTTGATTGT
TCTTAAAGTTTATATATAATATTTTGATATTATTTATTTTTTCAGACTTG
TCCAACAGGCCAATTCAGTTACAACACAGCATCATCTTGCTCACCGTGTC
CTGGAGGTTCTTATTGCACTAATGGAACAGCTCCCATTGTCCCTCCTTTA
CCATGTGCTTTTGGGTTCTACAGTGTTGTTGGTCAAGGCCAATGTAAAGA
ATGTCCACAGCGTGAGTGATTGTTATATTGCCTCCATATAGTGGTTCACA
TGACTAATTTAGTTCAATATAAAAATAAGTACCTTACAAAATCAATAGTT
ATACTGTGACTTTCATCTTTGGTATTGGAATTAGGCACTTTTCAAATAGA
GGATTAATCAATAATTTCATACGACAAAAAGGTCAATTTCATGATTTCAT
AAATATAATGGAAGTACAAGATTTTCGATTTTCCAAAACACTTGAGATTG
AACCTTTTGTCATGTGAACGACGATATAAAGGTCATGCAGTTATCACAAA
ATTTCTTAGCCATTGGTTTTGAAGGATTTCAATAAGATTTCCAAATTTTC
CCCTAGAAATATATTTTTCGTAGTTTATTTATTACTCTATTCTTGTTTTT
ATCTAAAACATTTTAGACACATACACGCCTGGTTTTGGAGCACAGTTTTG
CACACCTTGTCCAGTGGGTTCAACGTGCGATGATCCAACAGCCATCCCTA
TACCCTGCTCTGATGGTACTTATTGGTCAAATGCTGACGAGGTAGGTTCC
TTTTGATTGTCTAGCGGTCCAAAGTGTTTATTCATCCTCTCTTCTTTTAC
CAATTCTAAGTGCTATATAAACTACTTTGATAATTTTAGTATAATTACAA
TAGATACATATTAGACAAATGCTTTTCATTCATTATAGACGCCAAAATGT
ATAGCATGTCCGGCAGGTTATTCATGTGAAGATGCAAAAGTTCCACCTGT
TCCCTGCAAAAAAGGATTCTATTCCACTGGTGGTAATTCAACCTGTTTAC
CGTGTCCTGAAGGTTATTCATGTCTGGATTCCACGCAACCTGTCAGCTGT
AAAATTGGAGAATATAGTTTATCGGTAAGCTTATTAAAACTCTTGCAATG
TATATCCAGTTTTATCTTATGCTATACTCGAATACTTCTGGAACACTTAG
TTTTAAGAACAGTTACATAATAATAATAATAGGACACGAGGCTCAAAAGA
ACAAAGTAATGACAAGCTAAGTATTAGATTTCAGAAATGGCTATAAATGC
CATTTCTATATTGTATAACTCCTATATTGAGCTCTTAAGCAAAGAAACTT
ACTACTGCTTATTAACAGAAAAATCTTTAATCATTGTGATTTTTTTCTTT
TTTAGGGTGTTGAGTATTGTACGCCATGTCCACCAGGTTTTTCTTGCCCA
ACACCTAACCAAGCAGCTGGTCCATGTCCAGCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGTCCC
TCCTTTACCATGTGCTTTTGGGTTCTACAGTGTTGTTGGTCAAGGCCAAT
GTAAAGAATGTCCACAGCGTGAGTGATTGTTATATTGCCTCCATATAGTG
GTTCACATGACTAATTTAGTTCAATATAAAAATAAGTACCTTACAAAATC
AATAGTTATACTGTGACTTTCATCTTTGGTATTGGAATTAGGCACTTTTC
AAATAGAGGATTAATCAATAATTTCATACGACAAAAAGGTCAATTTCATG
ATATATAATGGAAGTGCAAGATTTTTGATTTTCCAAAACACTTTGAGATT
GAACCTTTTGTCATGTGAACGACGATATAAAGGTTATGCAGTTATCACAA
AATTTCTTAGCCATTGGTTTTGAAGGATTTCAATTAGATTTCCAAATTTT
CCCCTAGAGATATATTTTTCGTAGTTTATTTATTACTCTATTCTTGTTTT
TATCTAAAACATTTTAGACACATACACGCCTGGTTTTGGAGCACAGTTTT
GCACACCTTGTCCAGTGGGTTCAACGTGCGATGATCCAACAGCCATCCCT
ATACCCTGCTCTGATGGTACTTATTGGTCAAATGCTGACGAGGTAGGTTC
CTTTTGATTGTCTAGCGGTCCAAAGTGTTTATTCATCCTCTCTTCTTTTA
CCAATTCTAAGTGCTATATAAACTACTTTGATAATTTTAGTATAATTACA
ATAGATACATATTAGACAAATGCTTTTCATTCATTATAGACGCCAAAATG
TATAGCATGTCCGGCAGGTTATTCATGTGAAGATGCAAAAGTTCCACCTG
TTCCCTGCAAAAAAGGATTCTATTCCACTGGTGGTAATTCAACCTGTTTA
CCGTGTCCTGAAGGTTATTCATGTCTGGATTCCACGCAACCTGTCAGCTG
TAAAATTGGAGAATATAGTTTATCGGTAAGCTTATTAAAACTCTTGCAAT
GTATATCCAGTTTTATCTTATGCTATACTCGAATACTTCTGGAACACTTA
GTTTTAAGAACAGTTACATAATAATAATAATTGAACACGAGGCTCAAAAG
AACAAAGTAATGACAAGCTAAGTATTAGATTTCAGAAATGGCTATAAATG
CCATTTCTATATTGTATAACTCCTATATTGAGCTCTTAAGCAAAGAAACT
TACTACTGCTTATTAACAGAAAAATCTTTAATCATTGTGATTTTTTTCTT
TTTTAGGGTGTTGAGTATTGTACGCCATGTCCACCAGGTTTTTCTTGCCC
AACACCTAACCAAGCAGCTGGTCCATGTCCAGCAGGAACCTACTCTTTGA
AAGGAGAAGGAACGTGTAATAATTGTTCCGCCGGGTTCATGTGTCCAAGT
ACATCTCATGCTCCAATCCAATGTCGAGTGGGACAGACTGCAAATGGATT
ACAAAATCAAGTCAACTGTACCAATTGTTTAGCAGGATTTGCATGTCCTA
CTGCCGCGTAAGTGTAGTTATTTAATACCATATGATTTTGCTCAGATTGA
GTTGTAGTGCTAGGACATGAGGGTTTTACTTTAAAACATGAACATAACAA
TTTCATTTTGTTCAGGTTTTTTCTAGATTGATTTTCTATTGGTTTTTTTT
CTAGGGCAATTTGATCCCTAGAGACTAGGAAGCTGTTTTTTTCCTATTTC
AAAACAAATTTTTGATATCCATTTGCAGGTCACCAATGGAAGAGTGCAGT
GCAGGGTATTACAGTTTTAGTGGTGCAACAAAATGTACTTACTGTCCTGC
TGGATACCAATGTCCCACGCGCAATGTAAGTTCAACCATACTTATACTGT
CAAAAATTAACAAAAATTTCCTATTTCACTTCTCCACTTGTAATAGATTC
AAAACTTATCTTTCTACGACTGGTCCCATACTTAATTTTAGCCAATATTC
TAGTCCATTTTTTCTTGAAAGTTTCTGAAACAGGTTCCAGCAGTAGATTC
AACCAGGGATTTGCACTTTCTTATCTTGAAAATCGACATATTTTAGCTCT
TACTTCTAGAAGTAAGATTCAGGTCATTAAAAAACATTTTGAAACATTTC
ATCGAAAATGCACTCGTATAACTGCTAGGGCCTCTCTGTAGTCTAGTATT
CTCTAGTAATGTAGCGGTTCCATTTTGTAGAGTCGACCAACAATTTGCAC
TCAAGGAACATTCTCAGTTGGCGGCCAAACAACATGTCATCAATGTTCTG
CAGGATTCTCTTGTGAATCTATTTATTCGAACTCATCAAAACCATGCCCT
GGAGGTAAGAAATGGTTACCTTTAGTTTTAGTTAGCTGGTACTAAATGAC
GTTCAAATAGCGTCCATCTAGCATCCATGACGTTCATATAACGTTATATG
GATGTTGAAGCCAGCCAGAGGAAATCTTTGCAGGATTTTGAGTATTGCTT
CGTTGAATATTTTTATGAGTCATTTAATTGATTGATAAACACTTGCTTTG
ATACAGCTCCCTAGGTAAGGTATTTCAAAACCTTAACAGTAAATAAAGGC
CATATTCGATATATTTCATGTATTAAAGCAATATTTCAAAGGTATTCATG
ACTGATAGATTGTTCGTAAAAACGCAAAATTCTCGCAAAATTTAGATTCC
CCATAATTCATTATGATGGTAAAATTACCTATTAGCGCCGAGGGAATTTA
ATTTTCTATGACAATCTTCTTCAGGAACATACGCAGCAGCTGGCTCATAC
AAATGCACACCTTGTCCTCAAGGTTCAAGTTGTCCAGATCCAACTGTCAG
CAATGCGGTATCTTGCGATCATGGTAGCTTTGCTGTCGGTACACAAACAA
CTTGTACTGTCTGTCCCCCTGGTTGGGAATGTCCAAAAACTGATGCTTCA
GAAAACAAACAGTGCCAATTTGTAAGTACTCTTTTAAGCAACTTTCTTCG
GCTTATTTCCAAGCTTCAGAAGACAAACAAATTTCAGACTTTTACCTCCC
ATTTGCTGTAAATGTTCACGTATACTATTTGCCCGCGCAATTTCCACCTT
GAGCTCCGTAACTGAAAAATTCAAGCAGTATACGCATTCAATTGCTTTTG
CAAACCATTACGGTTTTCTCTCGTTTTTCTTTATTTTCATAGCCCACTAT
TCTCACTTTAAATTACTAGGCCACATTGTGACCAAGCAAGTTCAGTCATT
ATTTCAAATTCGGTAGTCTTATAAATTCTATTGATTTATGTTTAACCTTT
GTTTTTAAAGGGTTACTATTCAAAAGGCAATGCCACGTCTTGTACACTTT
GTCCAGCTGGGTTCGAATGTCGAAGAACAGATATTTCTGAACCTGTAGCG
TGCAAACCTGGAACTTTCTCAACCGGTGGCCAAGTGGTAAACTTTTGGTT
CATTCTATCATCTGATGCAATAATTATTATTGTGGATGTCATAACAGGTC
ATAAGCGTTTTAGACGAGAAGAAGAGACCTATTCTAAAGATCTTTAGTTC
ATTTTGTTCCTTTTGGATACTATAATTTGAGCATTCGAAGAAATCAAATG
GATGTTTCTATTACAGAACAGGTTGGACTTTGTAGTCTTCAGTTTTGGTA
CGCATTGAAATAAGTATTGGTGAATTTTCTTTCCTGTGAGTGTGAGATAT
ATAGAGCCAGATTTTGTAATATTGTTAATTGTACAATGAATATTTTTCTA
TCTTTAGAAATGTACTCGATGTCCCAGTGGCAGTTCATGTCCTGATCTCG
ATAAAGCAACCATCACCCCATGCCCGTCCGGTAGTTACAGTTTGTCCGGA
GAAGCGACTTGTACGGAATGCCCACCCGGTTATGCTTGCCCCAGTCTCTT
TGAACCGTTGATTTTGGCGTGTCCAAGGGGAACGTACTCGGTTGGTGCCA
AGTCGGTAAGTTGTCTTTGATTTGTTTATTTCCAAAGTTATCTTTTCTGG
TTTGTTTTGTTGAAATTATAAAATTGATAATTTTATTTTATTTTATGCAA
TTTCCTGCAAAATTAATTTCGCGCAAATTTAACTCGTCAATGACATTTAT
TTCATTTTTTTTTTGAGTCGTAGCTATTCTTTGAGTTTGTAAAATATTCA
TACTTTCGAAAGTTTCTCTTACATGAGAATCAAACATACATTTTCATGTA
TTCGTTTCGTTTTCCCTAGGAGTGTACACCGTGTCCTGCAGGTGAAGAAT
GTAAAAACAATACTCAAGTAGGCGTTGCGTGTTCTGACGGATATTATAGC
TTAGAAGGTTCATACAGTTGCACGCCCTGTCCTGCTGGTTATTACTGCCC
GGTTAAAAACGATCGTCCGAGAATCTGCGAGGCGGGTAAATACAATGATC
CCATGCGAACGACGTGTCTTGATTGTAATGCTGGATATGTGTGCGTTGAA
GGAAGCACCAAAGCCACACCTGAGATTGGATTATGTCCATTGGGTTCATA
CTGTGAAGATAAAATCAATGCCATCAAATGTCCTTCTGGAACTTACGGAC
AGAAAACGGGCGGAATAAGCGAATCAGATGCCTGTAAAGCATGTCCGGAA
GGTTATTACTGCGAGGCCGGAACACCAGGTTTCCCCAAACACTCGGTCCG
TTGTCCACCCGGTCATTTTTGTCTAGAGGGGACTAAAACCGCTTCTCAAC
ACCCGTGCCCGAATGGTTTTTTCAATACGGAAATCGGTGCCGTGAGACAA
GACCAGTGCAAGGAATGTCTCCCGGGATATTATTGTTCGGGAGGTGACCC
GACCGGTGATTCATTGTGTCCGACAGGTCATTATTGTCCGCAAAAAACGG
AATCTTCCACACAGTATCCATGCAGTGCTGGTTATTATACTGAAGAAAAA
GGAGCAACCAGTAAGTGAAAATGATTGTTTGTTCATGAAAAATCAATTCA
ATGACTGCAAAATTACAGTGGAGTCTCTTTAACTCGATCCTCTTTAACTC
GAATGCCTCCGTAACTCGAACAAGTTTTTTCTCTTCCCTACAATTATCAA
ATTTTCTATACCTAGAACAAATTTGTTTTCTCCATGTGTGTTCGAGTTCC
ACTGAGTTATTTAAGTTTTTGTAGCGATTTCAAAATGACTGTAACCCTCC
CAGTTTATACAATAGAGTTTCCATAGCACAAACCTTTTTAAACTCGATTG
TTTCCATAACTTCTTAAGACTTTTTACCTGGTCATCCGAACTATAGAGAC
TTTATAACTTTATCGTTTGAAAGATGTAGTTTATAAGAGTTGAAATGCTT
ATGTGAACTTCCTCTTCATTGGACCCAACATCTGATCTTTATTTTTTACT
CTTTATTAGCGGCGACAGATTGCAAAGTATGTCCAGCAGGTTACTACTGT
TTAGAAGGTAGTGATTCACCTACAGCGTGCCCTCCAGGAACATACAATCC
AGTACCGATGCAGGGTGCGGCTTCAAATTGTCGCCAGTGCGAAGCTGGCT
TTGCATGTCCGCTATCAGCATCTACTCAACCAACGGAACAGTGCAGCGCA
GGATATTACTGTCCTGAAGGCTCGTCATCACCTAGTGATCCATTGAATGC
GTGCCCGGCAGGAACATATACCGATTACCATAATTTAACAGCGGATAGCC
AATGTGACGGATGTCCTGCAGGTCAAGCATGTTCAGCGGGAACTGGAGGA
AATCAGAAACCACCACAACCTTGTGCCGCTGGTAAGTTCCCATTCACATT
CGCTACCGCAGCTGGCACACAACGTTGTTCCAACGTCTATCTAACGTCCA
CTACGTCCATATAACGTTTTATTAACGTCTAAACAGCGTTGTGTGCCAGC
TGGGACCGGTTTGTTTTAAGAGTGAAATTTTCAATAATGTAGGAAGGTTC
CATCTTTTCAGACAATTCTTTAACTTGCACTTTTATTGTTGTTTTTTTGT
TGAAAAAATGCTTTTGTTTTCATGAAAAGAACACTGCATGCTAGACGACT
ATATATCAGACATAGCAGAATATTTTAGCATACAAACTGATACTATACCG
TATGAATTACCGTAATATCATATAACACCCATATTATTGTATTACACGAT
TATAAACGACTCCAGTATAAACATAGTACATTGTTAACCGGTTACTTTTC
GAAGCGGGCTACACGACTTTTTGCGCAATGCAATTGGTTCTTTTCGCATG
ACGACGGGCCTACATTGTCCAGAGTTGCCCGTCGTTAGGAAAATTCATTG
TGACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTGTTTTTTCGCTTTATTTTGCTATTTTT
CCTGAATAAAGCGCTAAAAATCAATCGAAGCTGAAGGAAACGGTTAACAA
ATACAATAATGACCGGTTTTTTTTGGGCTTTACTGAAAATATTGCCCTCG
GTCAACGCAACAACCTGGCAAGCTCGGTCGTTACTTGACCTCGAGCAATA
TTTCTCAGTACAGCCCTCACTAACCGGTCATTATTATCCGACGCACGTAA
ATAGCGACATTTGATTGGCTTCTTTGCTGTCCAATATTTTCGAATATATA
GCTTCCATGGAGGCTACATATTTCAAAAATNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTTTAACCCCCGGGGGGGGGGGGGGCACGGATTA
TTTCTGGAAAAGCCAACTATAATACTGTAAATCGCGGTAATTAAAGAGTC
TTATTTATATATGATATAAGTACCAGCTTTTTCGTCAGCTCGCGGTCTTT
ATACCCCTTCATTCCCAACGCCCACCTCTTGCAGGCACAAAGTATGCGAC
CGAACATCCGTGCGCGGCTGGAACTTATTCCAATCGAACAGCCAACGTAC
GTTGGGAGGTATGCGAGNAGAAACCAGATTTACGGTCTTATAAATTGGAA
TTATGCTTGAAAACGAGAAATATTTTAGCGATGAACGGATAATAAACCAT
TTATTTGGACACAGTCTCATCCAATATGAAAAATATTGCGCTACGAGAAA
AGATATTGGACTCGGCGAAGCCTCGTCCAATATCTTTTCTCGCACGCCCA
ATATTTTTGCATATTGGATTCGACTTTGTCCAATAACTGCTTATTATTGT
ATTAATGTTGTTCGAGATATTCTTTGTTAGCTTTTCTACCCCTGTATTTT
TTCTCTTTACCAGGTTATTACTGTCTTCCAAGAACCCGCCATCCGAAACA
GCACCCATGTCCAGCAGGAAGTTACTCAAACTTGACAAACCTTCATAAAT
GGACTGACTGCACTGAATGCCCGAAAGGCCAATATTGTTTGGAAGGTGCG
GCGGCGCCGAGCGGGATATGCCCCACCGGTCATTATTGTCCACCAGGTAT
GCTTCTTGTTTGTTTGAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007540XLOC_007540Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013496-exon-sc0000168-1575043694:161153..161227TCONS_00013496-exon-sc0000168-1575043694:161153..161227Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:160754..160972TCONS_00013496-exon-sc0000168-1575043694:160754..160972Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:160340..160627TCONS_00013496-exon-sc0000168-1575043694:160340..160627Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:159776..159966TCONS_00013496-exon-sc0000168-1575043694:159776..159966Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:159614..159662TCONS_00013496-exon-sc0000168-1575043694:159614..159662Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:158906..159019TCONS_00013496-exon-sc0000168-1575043694:158906..159019Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:158620..158706TCONS_00013496-exon-sc0000168-1575043694:158620..158706Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:158191..158418TCONS_00013496-exon-sc0000168-1575043694:158191..158418Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:157767..157932TCONS_00013496-exon-sc0000168-1575043694:157767..157932Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:155786..155910TCONS_00013496-exon-sc0000168-1575043694:155786..155910Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:155453..155638TCONS_00013496-exon-sc0000168-1575043694:155453..155638Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:154921..155171TCONS_00013496-exon-sc0000168-1575043694:154921..155171Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:154603..154699TCONS_00013496-exon-sc0000168-1575043694:154603..154699Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:154124..154247TCONS_00013496-exon-sc0000168-1575043694:154124..154247Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:153507..153703TCONS_00013496-exon-sc0000168-1575043694:153507..153703Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:153042..153167TCONS_00013496-exon-sc0000168-1575043694:153042..153167Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:152523..152720TCONS_00013496-exon-sc0000168-1575043694:152523..152720Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:151568..152258TCONS_00013496-exon-sc0000168-1575043694:151568..152258Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:150747..151118TCONS_00013496-exon-sc0000168-1575043694:150747..151118Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1575043694:148709..148914TCONS_00013496-exon-sc0000168-1575043694:148709..148914Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:161153..161227TCONS_00013496-exon-sc0000168-1510915933:161153..161227Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:160754..160972TCONS_00013496-exon-sc0000168-1510915933:160754..160972Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:160340..160627TCONS_00013496-exon-sc0000168-1510915933:160340..160627Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:159776..159966TCONS_00013496-exon-sc0000168-1510915933:159776..159966Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:159614..159662TCONS_00013496-exon-sc0000168-1510915933:159614..159662Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:158906..159019TCONS_00013496-exon-sc0000168-1510915933:158906..159019Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:158620..158706TCONS_00013496-exon-sc0000168-1510915933:158620..158706Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:158191..158418TCONS_00013496-exon-sc0000168-1510915933:158191..158418Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:157767..157932TCONS_00013496-exon-sc0000168-1510915933:157767..157932Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:155786..155910TCONS_00013496-exon-sc0000168-1510915933:155786..155910Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:155453..155638TCONS_00013496-exon-sc0000168-1510915933:155453..155638Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:154921..155171TCONS_00013496-exon-sc0000168-1510915933:154921..155171Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:154603..154699TCONS_00013496-exon-sc0000168-1510915933:154603..154699Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:154124..154247TCONS_00013496-exon-sc0000168-1510915933:154124..154247Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:153507..153703TCONS_00013496-exon-sc0000168-1510915933:153507..153703Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:153042..153167TCONS_00013496-exon-sc0000168-1510915933:153042..153167Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:152523..152720TCONS_00013496-exon-sc0000168-1510915933:152523..152720Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:151568..152258TCONS_00013496-exon-sc0000168-1510915933:151568..152258Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:150747..151118TCONS_00013496-exon-sc0000168-1510915933:150747..151118Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1510915933:148709..148914TCONS_00013496-exon-sc0000168-1510915933:148709..148914Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:161153..161227TCONS_00013496-exon-sc0000168-1491911889:161153..161227Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:160754..160972TCONS_00013496-exon-sc0000168-1491911889:160754..160972Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:160340..160627TCONS_00013496-exon-sc0000168-1491911889:160340..160627Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:159776..159966TCONS_00013496-exon-sc0000168-1491911889:159776..159966Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:159614..159662TCONS_00013496-exon-sc0000168-1491911889:159614..159662Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:158906..159019TCONS_00013496-exon-sc0000168-1491911889:158906..159019Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:158620..158706TCONS_00013496-exon-sc0000168-1491911889:158620..158706Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:158191..158418TCONS_00013496-exon-sc0000168-1491911889:158191..158418Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:157767..157932TCONS_00013496-exon-sc0000168-1491911889:157767..157932Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:155786..155910TCONS_00013496-exon-sc0000168-1491911889:155786..155910Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:155453..155638TCONS_00013496-exon-sc0000168-1491911889:155453..155638Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:154921..155171TCONS_00013496-exon-sc0000168-1491911889:154921..155171Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:154603..154699TCONS_00013496-exon-sc0000168-1491911889:154603..154699Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:154124..154247TCONS_00013496-exon-sc0000168-1491911889:154124..154247Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:153507..153703TCONS_00013496-exon-sc0000168-1491911889:153507..153703Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:153042..153167TCONS_00013496-exon-sc0000168-1491911889:153042..153167Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:152523..152720TCONS_00013496-exon-sc0000168-1491911889:152523..152720Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:151568..152258TCONS_00013496-exon-sc0000168-1491911889:151568..152258Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:150747..151118TCONS_00013496-exon-sc0000168-1491911889:150747..151118Clytia hemisphaericaexon
TCONS_00013496-exon-sc0000168-1491911889:148709..148914TCONS_00013496-exon-sc0000168-1491911889:148709..148914Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000168supercontigsc0000168:148709..161227 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.96013e-09	0.00627148	4.72783e-09	0	0.627761	0.25822	3.56319e-08	0.165164	2.67874e-09	0	0.231469	0.433397	0	0.146608	0	0	1.92754e-09	1.03866e-09	6.46083e-08	3.82964e-08	8.42406e-06	1.27936e-08	0	0	0.0468902	0.244886	0.0413618	0.106127	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013496 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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