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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013349 ID=TCONS_00013349|Name=TCONS_00013349|organism=Clytia hemisphaerica|type=transcript|length=770bp
GGGAGAGAATGTTCAAAGAACACCTGAAACAGTGAACCATGAAGGAGAAG
GTCAAAGTTATCCTGGTCaacaccaaatttataaagaagaCGCTTCAATT
AACAGTTATAGAAATGATGAACGAAATTTTCCATTGCAATCTGTTCAGAA
TGGTCAAGCAAATATTGGACTTGAAGCAAATAATGGCGTCAGTTTAGCTC
AAGATTCTAAAGATCGACATCTACCATCGATGGGCGATTCTAATAACCAA
ATGTTGGACTCGCAACGAAATAATAGAGATCAAGAACGTCCTTTCGCAGA
CCAGGGTTATTCATTTGAAGATCAGAAGAATCGTTTCGGGGAGGATCAAA
GACAAGTTTCAGAAGCAGGTCTGACACAATCCAAAAATAGATTTGGCGAC
AACCAAGGTTATCAGGGAGAATCACCTCCAAGAAATATCAGCCCTACTGA
GATATGGCGACAAGCGGCTGTAGAATTGAACAGTGGTTATCCTTTGGAAC
AAAATGAAGTAAATCTTGGTTCAAATTCCTATCGCCAAACTGTTAACGTA
GAACCTCATGGAGAAATTCCTGAAACTTCAATCTCAAATTCGAACGCACC
AAATAGTTTCAGTGATACTTTGGCCCGTATGGAGAATCGTGACGGCCACC
AAGATCTACAGAGTCAAACCTTTGTGCAGGCGCCAAGTGATGTACTCGAA
TTCAGTAAAAACCAACAGCGTCTCGCACCTAATGATGGTCAATACTCGGC
AGATGAAGTGGACAGATTTC Run BLAST on NCBI protein sequence of TCONS_00013349-protein >TCONS_00013349-protein ID=TCONS_00013349-protein|Name=TCONS_00013349-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
GENVQRTPETVNHEGEGQSYPGQHQIYKEDASINSYRNDERNFPLQSVQN
GQANIGLEANNGVSLAQDSKDRHLPSMGDSNNQMLDSQRNNRDQERPFAD
QGYSFEDQKNRFGEDQRQVSEAGLTQSKNRFGDNQGYQGESPPRNISPTE
IWRQAAVELNSGYPLEQNEVNLGSNSYRQTVNVEPHGEIPETSISNSNAP
NSFSDTLARMENRDGHQDLQSQTFVQAPSDVLEFSKNQQRLAPNDGQYSA
DEVDRF Run BLAST on NCBI transcript from alignment at sc0000164:444643..445412 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013349 ID=TCONS_00013349|Name=TCONS_00013349|organism=Clytia hemisphaerica|type=transcript|length=770bp|location=Sequence derived from alignment at sc0000164:444643..445412 (Clytia hemisphaerica)
GAAATCTGTCCACTTCATCTGCCGAGTATTGACCATCATTAGGTGCGAGA
CGCTGTTGGTTTTTACTGAATTCGAGTACATCACTTGGCGCCTGCACAAA
GGTTTGACTCTGTAGATCTTGGTGGCCGTCACGATTCTCCATACGGGCCA
AAGTATCACTGAAACTATTTGGTGCGTTCGAATTTGAGATTGAAGTTTCA
GGAATTTCTCCATGAGGTTCTACGTTAACAGTTTGGCGATAGGAATTTGA
ACCAAGATTTACTTCATTTTGTTCCAAAGGATAACCACTGTTCAATTCTA
CAGCCGCTTGTCGCCATATCTCAGTAGGGCTGATATTTCTTGGAGGTGAT
TCTCCCTGATAACCTTGGTTGTCGCCAAATCTATTTTTGGATTGTGTCAG
ACCTGCTTCTGAAACTTGTCTTTGATCCTCCCCGAAACGATTCTTCTGAT
CTTCAAATGAATAACCCTGGTCTGCGAAAGGACGTTCTTGATCTCTATTA
TTTCGTTGCGAGTCCAACATTTGGTTATTAGAATCGCCCATCGATGGTAG
ATGTCGATCTTTAGAATCTTGAGCTAAACTGACGCCATTATTTGCTTCAA
GTCCAATATTTGCTTGACCATTCTGAACAGATTGCAATGGAAAATTTCGT
TCATCATTTCTATAACTGTTAATTGAAGCGtcttctttataaatttggtg
ttGACCAGGATAACTTTGACCTTCTCCTTCATGGTTCACTGTTTCAGGTG
TTCTTTGAACATTCTCTCCC Coding sequence (CDS) from alignment at sc0000164:444643..445412 >TCONS_00013349 ID=TCONS_00013349|Name=TCONS_00013349|organism=Clytia hemisphaerica|type=CDS|length=768bp|location=Sequence derived from alignment at sc0000164:444643..445412 (Clytia hemisphaerica)
AAATCTGTCCACTTCATCTGCCGAGTATTGACCATCATTAGGTGCGAGAC
GCTGTTGGTTTTTACTGAATTCGAGTACATCACTTGGCGCCTGCACAAAG
GTTTGACTCTGTAGATCTTGGTGGCCGTCACGATTCTCCATACGGGCCAA
AGTATCACTGAAACTATTTGGTGCGTTCGAATTTGAGATTGAAGTTTCAG
GAATTTCTCCATGAGGTTCTACGTTAACAGTTTGGCGATAGGAATTTGAA
CCAAGATTTACTTCATTTTGTTCCAAAGGATAACCACTGTTCAATTCTAC
AGCCGCTTGTCGCCATATCTCAGTAGGGCTGATATTTCTTGGAGGTGATT
CTCCCTGATAACCTTGGTTGTCGCCAAATCTATTTTTGGATTGTGTCAGA
CCTGCTTCTGAAACTTGTCTTTGATCCTCCCCGAAACGATTCTTCTGATC
TTCAAATGAATAACCCTGGTCTGCGAAAGGACGTTCTTGATCTCTATTAT
TTCGTTGCGAGTCCAACATTTGGTTATTAGAATCGCCCATCGATGGTAGA
TGTCGATCTTTAGAATCTTGAGCTAAACTGACGCCATTATTTGCTTCAAG
TCCAATATTTGCTTGACCATTCTGAACAGATTGCAATGGAAAATTTCGTT
CATCATTTCTATAACTGTTAATTGAAGCGtcttctttataaatttggtgt
tGACCAGGATAACTTTGACCTTCTCCTTCATGGTTCACTGTTTCAGGTGT
TCTTTGAACATTCTCTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013349-exon-sc0000164-1491911889:444643..445412 | TCONS_00013349-exon-sc0000164-1491911889:444643..445412 | Clytia hemisphaerica | exon |
| TCONS_00013349-exon-sc0000164-1510915933:444643..445412 | TCONS_00013349-exon-sc0000164-1510915933:444643..445412 | Clytia hemisphaerica | exon |
| TCONS_00013349-exon-sc0000164-1575043694:444643..445412 | TCONS_00013349-exon-sc0000164-1575043694:444643..445412 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000164 | supercontig | sc0000164:444643..445412 . |
Blast
The following BLAST results are available for this feature:
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