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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013287 ID=TCONS_00013287|Name=TCONS_00013287|organism=Clytia hemisphaerica|type=transcript|length=674bp
NNAAAGTAGCACAAAGGCTGTAATGTATTCGAACTATAGAAAACATTCAA
CAGTAAAATATCTAATTGCTTGTAACCCTCTTGGGTttctcaattttcat
ttttaggcaGAAAATTAGAATTAGAAAAAAACGTCATGtatccaaaagat
ttttttaaagaaagtctCTCTTTTTCTCGATCAGTACATGGTTTGGAGTT
TCAGTTAAAGCAAGAGCAAGAAGAACTTTTGTTTGCTTTCTTAAATGGTA
AAGATTGTATTGGTGTTTTGCCAACAAACTTTGGAAAGTCAATTATTTAC
CAACTAGCACCAAGTGTTCACCATGACATGGCTAGAAGAACAGATGAAAT
GGTTGCGATTCTACAAGGACAGGTGATGCTGATAGTTGTTTCCCCAACAA
AAGCTTTGATTAACGATCAAATGGAAAGCTGTGAGAGGCTTGGTATAACA
GCAAGGAAACTGTGTTCAGATGAACTTGATGATTTGAATGATGAAGCAGG
AGAGATAACAATTTTATATGCAATGCCAGAGAACCTATTGGAAGAAAAGT
TTCGTTCCTTTCTCCTGGATAAGTTTCAAGAAAGAATAATTGGTATCGTT
GTTGATGAAGCACATCTTGTTCCAAAATGGTAAgcaaattgttttcattt
ttatgggttttaTTTGTGATATAG Run BLAST on NCBI protein sequence of TCONS_00013287-protein >TCONS_00013287-protein ID=TCONS_00013287-protein|Name=TCONS_00013287-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MYPKDFFKESLSFSRSVHGLEFQLKQEQEELLFAFLNGKDCIGVLPTNFG
KSIIYQLAPSVHHDMARRTDEMVAILQGQVMLIVVSPTKALINDQMESCE
RLGITARKLCSDELDDLNDEAGEITILYAMPENLLEEKFRSFLLDKFQER
IIGIVVDEAHLVPKW Run BLAST on NCBI transcript from alignment at sc0000164:369142..370354+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013287 ID=TCONS_00013287|Name=TCONS_00013287|organism=Clytia hemisphaerica|type=transcript|length=1213bp|location=Sequence derived from alignment at sc0000164:369142..370354+ (Clytia hemisphaerica)
NNAAAGTAGCACAAAGGCTGTAATGTATTCGAACTATAGAAAACATTCAA
CAGTAAAATATCTAATTGCTTGTAACCCTCTTGGGTttctcaattttcat
ttttaggcaGAAAATTAGAATTAGAAAAAAACGTCATGtatccaaaagat
ttttttaaagaaagtctCTCTTTTTCTCGATCAGTACATGGTTTGGAGTT
TCAGTTAAAGCAAGAGCAAGAAGAACTTTTGTTTGCTTTCTTAAATGGTA
AAGATTGTATTGGTGTTTTGCCAACAAACTTTGGAAAGTCAATTATTTAC
CAACTAGCACCAAGTGTTCACCATGACATGGCTAGAAGAACAGATGAAAT
GGTTGCGATTCTACAAGGACAGGTGATGCTGATAGTTGTTTCCCCAACAA
AAGCTTTGATTAACGATCAAATGGAAAGCTGTGAGAGGTAACAGTTGTTT
TCAATTAGACCCATAGATACTTTTCTTTTCATCTACTGTAGTAATTAGTC
TGGTCGATTTGTTTTTTGTCATAGTGCAGTTAAGGGGGTCTGATCTCCCT
ATCTATTTATCTATTCAATAAGTAATTAAAGGCAAAGTTGCCCATCCTTC
TTACATGAATCCTAAATCCTCCCCTTTGTGGCCAACTTTAAAAAATGCCA
ATCCCCCTTAAGAGTTTTTTGGCTGCTTACCACTCATATAAAATACTAAA
TTTGCCTGAAAATAGGGAATGGGTTATAAATTGGGCAAttggaaagtttg
aaaataaaaatatagaaaaagtaGGATTTATGTTAACCCCCCTTCTTAAG
GGATCCTCTCTTCCTGAGGGATCTCTCTTCCTAAGGGATCTCCTcttctt
ttggaaaatttttgaccctCCCTTCTTGAGTTTTTTGGCAGAtgttaccc
cccccccttacagCCCCTGAAGAAAGGAGGAGATTCTTGAATTGCCAGGG
CTGacaatcaaattatttttcatcagGCTTGGTATAACAGCAAGGAAACT
GTGTTCAGATGAACTTGATGATTTGAATGATGAAGCAGGAGAGATAACAA
TTTTATATGCAATGCCAGAGAACCTATTGGAAGAAAAGTTTCGTTCCTTT
CTCCTGGATAAGTTTCAAGAAAGAATAATTGGTATCGTTGTTGATGAAGC
ACATCTTGTTCCAAAATGGTAAgcaaattgttttcatttttatgggtttt
aTTTGTGATATAG Coding sequence (CDS) from alignment at sc0000164:369142..370354+ >TCONS_00013287 ID=TCONS_00013287|Name=TCONS_00013287|organism=Clytia hemisphaerica|type=CDS|length=996bp|location=Sequence derived from alignment at sc0000164:369142..370354+ (Clytia hemisphaerica)
ATGtatccaaaagatttttttaaagaaagtctCTCTTTTTCTCGATCAGT
ACATGGTTTGGAGTTTCAGTTAAAGCAAGAGCAAGAAGAACTTTTGTTTG
CTTTCTTAAATGGTAAAGATTGTATTGGTGTTTTGCCAACAAACTTTGGA
AAGTCAATTATTTACCAACTAGCACCAAGTGTTCACCATGACATGGCTAG
AAGAACAGATGAAATGGTTGCGATTCTACAAGGACAGGTGATGCTGATAG
TTGTTTCCCCAACAAAAGCTTTGATTAACGATCAAATGGAAAGCTGTGAG
AGGCTTGGTATAACAGCAAGGAAACTGTGTTCAGATGAACTTGATGATTT
GAATGATGAAGCAGGAGAGATAACAATTTTATATGCAATGCCAGAGAACC
TATTGGAAGAAAAGTTTCGTTCCTTTCTCCTGGATAAGTTTCAAGAAAGA
ATAATTGGTATCGTTGTTGATGAAGCACATCTTGTTCCAAAATGGTAAAT
GtatccaaaagatttttttaaagaaagtctCTCTTTTTCTCGATCAGTAC
ATGGTTTGGAGTTTCAGTTAAAGCAAGAGCAAGAAGAACTTTTGTTTGCT
TTCTTAAATGGTAAAGATTGTATTGGTGTTTTGCCAACAAACTTTGGAAA
GTCAATTATTTACCAACTAGCACCAAGTGTTCACCATGACATGGCTAGAA
GAACAGATGAAATGGTTGCGATTCTACAAGGACAGGTGATGCTGATAGTT
GTTTCCCCAACAAAAGCTTTGATTAACGATCAAATGGAAAGCTGTGAGAG
GCTTGGTATAACAGCAAGGAAACTGTGTTCAGATGAACTTGATGATTTGA
ATGATGAAGCAGGAGAGATAACAATTTTATATGCAATGCCAGAGAACCTA
TTGGAAGAAAAGTTTCGTTCCTTTCTCCTGGATAAGTTTCAAGAAAGAAT
AATTGGTATCGTTGTTGATGAAGCACATCTTGTTCCAAAATGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013287-exon-sc0000164-1491911889:369142..369578 | TCONS_00013287-exon-sc0000164-1491911889:369142..369578 | Clytia hemisphaerica | exon |
| TCONS_00013287-exon-sc0000164-1510915933:369142..369578 | TCONS_00013287-exon-sc0000164-1510915933:369142..369578 | Clytia hemisphaerica | exon |
| TCONS_00013287-exon-sc0000164-1575043694:369142..369578 | TCONS_00013287-exon-sc0000164-1575043694:369142..369578 | Clytia hemisphaerica | exon |
| TCONS_00013287-exon-sc0000164-1491911889:370118..370354 | TCONS_00013287-exon-sc0000164-1491911889:370118..370354 | Clytia hemisphaerica | exon |
| TCONS_00013287-exon-sc0000164-1510915933:370118..370354 | TCONS_00013287-exon-sc0000164-1510915933:370118..370354 | Clytia hemisphaerica | exon |
| TCONS_00013287-exon-sc0000164-1575043694:370118..370354 | TCONS_00013287-exon-sc0000164-1575043694:370118..370354 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000164 | supercontig | sc0000164:369142..370354 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
The following BLAST results are available for this feature:
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