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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013212 ID=TCONS_00013212|Name=TCONS_00013212|organism=Clytia hemisphaerica|type=transcript|length=2914bp
aaaatcctgtcattacttttttctgattttttgcacaatgatgcaaaatg
gcaatgcctaaactgtgacggagcccgaatttcgaaaaaaaatatatttg
ggcaaatttgggccaaaaactgcctaaaaataggtttttttggactttgt
gtaaaatcctgtcattacttttttctgattttttgcacaatgatgcaaaa
tggcaatgcctaaactgtgacggagcccgaatttcgaaaaaaaatatatt
tgggcaaatttgggccaaaaacagcttaaaaggttttttgggcctgaatg
gtttaagtgattttcgtatttggggaaattcctttttaccattttacatt
attcaacttacaagctttatttttccattctgaatttttgtacaattatt
gtcacttttttcttattttcatctgatgttaatcattaggtaggtccatt
cagcatgttgcttgttatctatttttttttcacttagcGTTACATGTATG
CGAAATTCTTCAGTGCGTTGACATCAACACGACGAGCACGTCGAAACCAG
GTGCCACACTTTCGACTACACaaagtgaaaaatatcaaaGCATGGTTGTC
ACTCCGATCCTTTTTGAAGAAACGTGGCCCACAGCGCTCAGTGGATACAA
TAGTCTCTGCAGCTTTCATCTTGGGAATTTTATTGTTGGTGATTTGCTGT
GTCCAGTTTCTATCGATCAGTGATCAGAAGGATCATTTTTTGACCTATTT
TTTCAGCTGGGAAGTCTCTGTATGgGGTCTGGTACTGGGCGTGTTTCTGA
TTCGGTTCATTGCTCTTGGCTCAGATATCAACAGGAAGTATCGAAACAGT
TCCATTCTGCTTACCGAACAAATCAATTTATACCTGCAAATGGAAAAGAA
CCCTGAAAAGAAAGAGGAACTACTCATTGCAAATAATGTATTGAAACTAG
CCTCCGATCTTCTAAAGgaaCTAGACGGTTCATTCAAGATTTCTGGCTTC
ATAATGAATCCCCTATTATCAAACATTACTCGAGTGGTTGTAATGTCATT
ATTCTCTGGTGTAATGTCTGATATCCTTGGATTCCGTTTAAGGCTGTGGA
AGATTAAGGCGTAGAATTGGCACAAAGGATTCAACAAGAAGGTTTGATTT
GTATGTATTATTGTTGTCGTGGATACTGGAAAGTCCATTCTGTACTATAT
CATAAGTCTTTTTTTTATGTTGACTGGGTTGGATTGAATGTTGTCATTgg
ataaaacagaaaaaaaaacatttagaataTTCAAATATTATTTGCGGAAT
CGCTGGTTGATTTTGActgtttatatattatatacctACTATGatttctt
gaaagttatgaCTTATTTTTGCGTTGTTTTTTTTACCCAGAGGAAAACAC
AAACTCAATTTTCAGGCCATACTAcaacaaactaaaaaaaatgtaTGTAT
TGGCAATCGATTTTTTCCCTGTTTTTTTATACTTAGTAACCCAAATTAGC
ATCAACCAGGCATACTCAGGCATACTAGCTATCATCTAACCCCAAGCAGG
TTTCctagatattcttgttttctCTGGGAACAtttttcttcgtttctttt
ctttttgtataATGGTTTAATAATtacatttttgtcaatatatttctttt
tcatatttaaaaaaagctttgtgttattaaaatatttaagaattttcaag
atattttatttttatttgatattcTAACTAACGAACTTTAACTTAGTCTA
ACTGTAGTAGATATAAACATTTAATTTATATTTTGAGACTTGAACGTATT
TATTTCTTGAGactgaaaactttttcatttaccAAGCCCGTACGTAAGAA
CCGCGGTTTTCGTAGACCTTATAAAACCTTGCTATTTAACTTCCTCGAAG
TTTTGATAAACTTTCCTGTGATGGCTAATTTTTGAATTCGATACATTTCG
ATacatacaccttttcgaccgtagtcgcgcggtcaggtgcgtgccacttt
attatttgattTACCACCCTAACCTTGATCCGATCCTTTGTgaacacttt
ttctattgtctttagccgcaaaaaaaaagactgggacggttttagggtgg
taaaacggacaaagaAATACCCGCgaggcaattggcggctacggtcgaaa
agagaACAACATTTGTATAAAAGCTTTTTGGTCTTATACCATCATCAGTG
CTATAGATGCTAAATTTCAACCTTCTCGGTATAACAATGTTACCTACGGT
CTTGGTAAATGGAAGACATTCTTTATAAAGTGATTTATTTGTCTTGGTTT
AATTTACTCTTATGGTAATATTTAGGTAATTTATCTGGACCTTTATCCCG
AGACATGGGAGAGACTCATGTCATGTCAACAGTAAgtttctgctcatcct
ctagcgaaagaGTTTCTTTCTTTCACTTGCGACGAAGATGATTATGGTTT
TTCTAGATCCTGACTGACCCAAGACCACGGTAAATCTGCACTTTtatcgt
cctcgattttgcgagTCTGAACTACCAATCATCTCAGTAACTCCGCCGTC
TTTTAAAGGGTTGGATGCGTAAACTTGCTAATGTCCAGGGATCGAGGTgg
gataatttttgttttgttttgtttttctttagtttttataCGCATTTTGA
GAGAAAGAGGTGTTTAGAGCCGTGTAAATTAGTTTATAAGTAGGTCAACA
AATATTAGGTAAATAAACATTGTATACAAAGACTTTATTCTGACAAATTG
ACTGTTATTATTGCAAACGAATTCCATTTAATGAATTTAGTTAGGGGTTA
TGGATTAAAAAGACAgtttttgctgatgtcagcaagaAACGTTTTTCCTT
AATTTTTCCAGAATGGCTGAAACAGAATTAATGGCCCAGcactttttgga
aagatattaataTA Run BLAST on NCBI protein sequence of TCONS_00013212-protein >TCONS_00013212-protein ID=TCONS_00013212-protein|Name=TCONS_00013212-protein|organism=Clytia hemisphaerica|type=polypeptide|length=206bp
MYAKFFSALTSTRRARRNQVPHFRLHKVKNIKAWLSLRSFLKKRGPQRSV
DTIVSAAFILGILLLVICCVQFLSISDQKDHFLTYFFSWEVSVWGLVLGV
FLIRFIALGSDINRKYRNSSILLTEQINLYLQMEKNPEKKEELLIANNVL
KLASDLLKELDGSFKISGFIMNPLLSNITRVVVMSLFSGVMSDILGFRLR
LWKIKA Run BLAST on NCBI transcript from alignment at sc0000163:387180..393325+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013212 ID=TCONS_00013212|Name=TCONS_00013212|organism=Clytia hemisphaerica|type=transcript|length=6146bp|location=Sequence derived from alignment at sc0000163:387180..393325+ (Clytia hemisphaerica)
aaaatcctgtcattacttttttctgattttttgcacaatgatgcaaaatg
gcaatgcctaaactgtgacggagcccgaatttcgaaaaaaaatatatttg
ggcaaatttgggccaaaaactgcctaaaaataggtttttttggactttgt
gtaaaatcctgtcattacttttttctgattttttgcacaatgatgcaaaa
tggcaatgcctaaactgtgacggagcccgaatttcgaaaaaaaatatatt
tgggcaaatttgggccaaaaacagcttaaaaggttttttgggcctgaatg
gtttaagtgattttcgtatttggggaaattcctttttaccattttacatt
attcaacttacaagctttatttttccattctgaatttttgtacaattatt
gtcacttttttcttattttcatctgatgttaatcattaggtaggtccatt
cagcatgttgcttgttatctatttttttttcacttagcGTTACATGTATG
CGAAATTCTTCAGTGCGTTGACATCAACACGACGAGCACGTCGAAACCAG
GTGCCACACTTTCGACTACACaaagtgaaaaatatcaaaGCATGGTTGTC
ACTCCGATCCTTTTTGAAGGTAAAGAACAAGATTTGATTTAAAGTCTCTT
CAAAATAATTGGCAGTTCCCCTTGAAGCAAAAAGATACAATGAAAAGTAA
Tacattgttggaaagataattttcagtcttgataaaagattttttaaatt
tcctgaaagttgaaaatgaagttgaaaaatgaaaaagaaaaattatgaag
attttttctaccCGGCCaaaaatagatagatagattcgATTTTTTGCATG
GATATCCCAAttttttagacagtctttcggttattttcacggggtccacg
gccagccagAAATTTTAAACCCCAATGATTTCATTTTATAGATGATAAAT
TGCCTTAAAATGTTCGAAATGGACCTGATGCAACTTTTGATCCAAAATAG
Gcatgaaaaattcgaaaacatatttgaaatcagcaaaaactaaatattct
tactttcttttactttccATACCCTTCTTCAGAAACGTGGCCCACAGCGC
TCAGTGGATACAATAGTCTCTGCAGCTTTCATCTTGGGAATTTTATTGTT
GGTGATTTGCTGTGTCCAGTTTCTATCGATCAGTGATCAGAAGGATCATT
TTTTGACCTATTTTTTCAGCTGGGAAGTCTCTGTATGGTAAGTAAGCTTC
CTTTCATTATAAATCGTAAAGTGTGCAATTTTTTGATAGCATGCGTAAAC
CTAACAAAATCAGTCTAGTTACACTGACATGAAAGCTGAGAGGAAGGACC
ATTTTATGACCATTTTTTTCATCTGGGAAGTCTCTGTCTgttaaattagc
caaaagttcTTTACATTGCgctttccagaaaaaaatttttgtcctcactg
ttgaggatattgatttttcgaagtatcgaaccctcNAATCTTTACCCCca
cactgttgaggatattgatttttcgaagtatcgaactctttggatatcct
actttattagtaaaacctcttggatatccactcttagaaatatgctcaac
cccctggatatcctctcttataaagatgcttacccctggatatccataTT
TAACCCACTGggtatccacttttgaacaaaaattgttaaCCCTCTGGATA
TCctatatcctcaacaggggggggggcacggattatttctggaaaagccc
attagaAATCGAAAAGTGTGCACTTTTTTGATACCATATTGAAACCACTT
TACTTATAAAGGAATCGTTCGAATTATGAAACGACTCGAATGATTAAACT
TCGAATTAGCGATAGAATTCACTGTAAATCTAACCTTTTTGACTTAATCT
TTTGACTTAATCTTTTGACTTAATCTTTCATCAAACTGAATTTTATTGTT
GCTCGAAATACGaatgtttttattacttttaggGGTCTGGTACTGGGCGT
GTTTCTGATTCGGTTCATTGCTCTTGGCTCAGATATCAACAGGAAGTATC
GAAACAGTTCCATTCTGCTTACCGAACAAGTAGGTTAAACGATTTTTCAC
CGCGTGTTTAAGCTTCCTGTAAAGACCACAGTATTTTTTCTACACATTTT
ACATTTTGACTTCTGTAAATCAAGAGATTTGTTATATTCATGACGTGATG
TTTTATACACGGAAGGACACAAAATATTACTATTTTTGAATCTAAATAAT
AAAAGTAGTGGCAAACGCCCGGacgaatatcatgaattgatgaagaaagg
tcaaacagcctTTAGTTCTAAATACTATTTATAATTTTGACCAAGTTCAA
AAGCCATACTTCTATCTAAAAAAAGGTAATTTCTGCTTGTGACACATAAT
TAATGAAATGTCTCAATGTGGGTCACTGGTACACACTAAAACAGGgaact
ttggtttaacttacTATAGATTAATCGTGCATGCTcagttaaaaaaatct
tttaagagAGTCAAACCATAGTGCTTGATTTTCCCTTGAAATAATAAAAT
CGTATTggttaaaaatgtattttcttgactagtacagtagtatttctttt
tttctcaaaagtaacgctttttcgaaagagaatttttttcgaattttctg
cATAATTTTTGAACACGTGAAGCAAATTTAAAGTATGATCACTCAAAACT
TAAGTTAgcctttcctctttctgatgGTGAAAAGTTTAGATTTATAACAG
ACATTTTCTCATAACCTCACTTCAaactagacaggagacccgtcgtgtgt
ttttttataatttgatgtacacaagacggcttcgagctgtgagtccaata
ttggactcacattttttacagttggaaattcgaatttagctctgtcctca
cttactaaaataaaaaccaaatttcgaaagttgcgctttctctaagaaag
tgtgaccggtaaaagaataacaaaatttgattggctatgttttcaaccgt
tNctctaagaaagtgtgaccagtaaaagaataacaaaatttgattggcta
tgttttcaaccgttattaggatctgagaaattcaaactctcagcccgtac
catgctatatatttcgccatcagtttatcaaagaagagatcatagcatgg
attcccaggctaacttCAAACTTGTACACTATTTTTAAAACATCTGGTAG
TAACACATCATTCATTTTAATATTCAGATCAATTTATACCTGCAAATGGA
AAAGAACCCTGAAAAGAAAGAGGAACTACTCATTGCAAATAATGTATTGA
AACTAGCCTCCGATCTTCTAAAGGTAAGTCTACAGATCCTTGGAGCTTCA
TATGTCTTTTTTACAGAGTAGGCATGAAGAACAGAAACTCTATACTCTAC
AATGGGTTATTGTAAGTACATCTGACTTTAAATTCAACGGAATGGTGCTC
AATATCGTAATTAGCGGTATCCTATTTTTGATAAACGGAGAAAGTTTTCA
ATACTGGGAGTTTCTTACTTTTTCAAGCATTCatcgattgattgatttat
tgattgattgattgattgattgattgattgattgattgattgattgattg
attgattgattgattgattgattgattgattgattcttttatttttttag
gaaCTAGACGGTTCATTCAAGATTTCTGGCTTCATAATGAATCCCCTATT
ATCAAACATTACTCGAGTGGTTGTAATGTCATTATTCTCTGGTGTAATGT
CTGATATCCTTGGATTCCGTTTAAGGGTATGTTTATTGTTTTGTTCATTA
CAAACAAGcggaatttttctaaaatctcTATAGATCCGAGACATGCTCAA
TGGCAAATATGAGGGGGCTCGAAATTCATGACAGAGAGTCTTCATATCCT
TTTCAGGAGTATGTCCTTTTCCTAAAAACCATATCCTCCGCATCATAAAT
CTTGAAATCCCATTAAATCCGCCAGTGATCGCTTTCTTCACACCTTTGTC
TTCAGTGTGCTTAAAAAACTTTATATTACCCTCGTCCCAAGTGTATTAGC
TTTTTTTCGGTACCTATTGCACAAGGACCAGCCTCCTAATTGTTGTTAGT
GAGCTTTTTCTGGTACCTCATTGCTATGTTAAAGCATTGATCTTTCTTGG
GAAGGTTCAGGTAACTGGACTCCCGGTTTGTCCTTCGGTTATCGTACCAA
AGAGGATCCTCAACGTTGAAGATCCCTGTATCGGACGTAAATTCTCACAA
TTTTATACTGGCGTTTTATACATTTGAGCATTCATTCGAAATtctaaaca
tgcgttttttattGCTTTGTTTTAGCTGTGGAAGATTAAGGCGTAGAATT
GGCACAAAGGATTCAACAAGAAGGTTTGATTTGTATGTATTATTGTTGTC
GTGGATACTGGAAAGTCCATTCTGTACTATATCATAAGTCTTTTTTTTAT
GTTGACTGGGTTGGATTGAATGTTGTCATTggataaaacagaaaaaaaaa
catttagaataTTCAAATATTATTTGCGGAATCGCTGGTTGATTTTGAct
gtttatatattatatacctACTATGatttcttgaaagttatgaCTTATTT
TTGCGTTGTTTTTTTTACCCAGAGGAAAACACAAACTCAATTTTCAGGCC
ATACTAcaacaaactaaaaaaaatgtaTGTATTGGCAATCGATTTTTTCC
CTGTTTTTTTATACTTAGTAACCCAAATTAGCATCAACCAGGCATACTCA
GGCATACTAGCTATCATCTAACCCCAAGCAGGTTTCctagatattcttgt
tttctCTGGGAACAtttttcttcgtttcttttctttttgtataATGGTTT
AATAATtacatttttgtcaatatatttctttttcatatttaaaaaaagct
ttgtgttattaaaatatttaagaattttcaagatattttatttttatttg
atattcTAACTAACGAACTTTAACTTAGTCTAACTGTAGTAGATATAAAC
ATTTAATTTATATTTTGAGACTTGAACGTATTTATTTCTTGAGactgaaa
actttttcatttaccAAGCCCGTACGTAAGAACCGCGGTTTTCGTAGACC
TTATAAAACCTTGCTATTTAACTTCCTCGAAGTTTTGATAAACTTTCCTG
TGATGGCTAATTTTTGAATTCGATACATTTCGATacatacaccttttcga
ccgtagtcgcgcggtcaggtgcgtgccactttattatttgattTACCACC
CTAACCTTGATCCGATCCTTTGTgaacactttttctattgtctttagccg
caaaaaaaaagactgggacggttttagggtggtaaaacggacaaagaAAT
ACCCGCgaggcaattggcggctacggtcgaaaagagaACAACATTTGTAT
AAAAGCTTTTTGGTCTTATACCATCATCAGTGCTATAGATGCTAAATTTC
AACCTTCTCGGTATAACAATGTTACCTACGGTCTTGGTAAATGGAAGACA
TTCTTTATAAAGTGATTTATTTGTCTTGGTTTAATTTACTCTTATGGTAA
TATTTAGGTAATTTATCTGGACCTTTATCCCGAGACATGGGAGAGACTCA
TGTCATGTCAACAGTAAgtttctgctcatcctctagcgaaagaGTTTCTT
TCTTTCACTTGCGACGAAGATGATTATGGTTTTTCTAGATCCTGACTGAC
CCAAGACCACGGTAAATCTGCACTTTtatcgtcctcgattttgcgagTCT
GAACTACCAATCATCTCAGTAACTCCGCCGTCTTTTAAAGGGTTGGATGC
GTAAACTTGCTAATGTCCAGGGATCGAGGTgggataatttttgttttgtt
ttgtttttctttagtttttataCGCATTTTGAGAGAAAGAGGTGTTTAGA
GCCGTGTAAATTAGTTTATAAGTAGGTCAACAAATATTAGGTAAATAAAC
ATTGTATACAAAGACTTTATTCTGACAAATTGACTGTTATTATTGCAAAC
GAATTCCATTTAATGAATTTAGTTAGGGGTTATGGATTAAAAAGACAgtt
tttgctgatgtcagcaagaAACGTTTTTCCTTAATTTTTCCAGAATGGCT
GAAACAGAATTAATGGCCCAGcactttttggaaagatattaataTA Coding sequence (CDS) from alignment at sc0000163:387180..393325+ >TCONS_00013212 ID=TCONS_00013212|Name=TCONS_00013212|organism=Clytia hemisphaerica|type=CDS|length=3726bp|location=Sequence derived from alignment at sc0000163:387180..393325+ (Clytia hemisphaerica)
ATGTATGCGAAATTCTTCAGTGCGTTGACATCAACACGACGAGCACGTCG
AAACCAGGTGCCACACTTTCGACTACACaaagtgaaaaatatcaaaGCAT
GGTTGTCACTCCGATCCTTTTTGAAGAAACGTGGCCCACAGCGCTCAGTG
GATACAATAGTCTCTGCAGCTTTCATCTTGGGAATTTTATTGTTGGTGAT
TTGCTGTGTCCAGTTTCTATCGATCAGTGATCAGAAGGATCATTTTTTGA
CCTATTTTTTCAGCTGGGAAGTCTCTGTATGgGGTCTGGTACTGGGCGTG
TTTCTGATTCGGTTCATTGCTCTTGGCTCAGATATCAACAGGAAGTATCG
AAACAGTTCCATTCTGCTTACCGAACAAATCAATTTATACCTGCAAATGG
AAAAGAACCCTGAAAAGAAAGAGGAACTACTCATTGCAAATAATGTATTG
AAACTAGCCTCCGATCTTCTAAAGgaaCTAGACGGTTCATTCAAGATTTC
TGGCTTCATAATGAATCCCCTATTATCAAACATTACTCGAGTGGTTGTAA
TGTCATTATTCTCTGGTGTAATGTCTGATATCCTTGGATTCCGTTTAAGG
CTGTGGAAGATTAAGGCGTAGATGTATGCGAAATTCTTCAGTGCGTTGAC
ATCAACACGACGAGCACGTCGAAACCAGGTGCCACACTTTCGACTACACa
aagtgaaaaatatcaaaGCATGGTTGTCACTCCGATCCTTTTTGAAGAAA
CGTGGCCCACAGCGCTCAGTGGATACAATAGTCTCTGCAGCTTTCATCTT
GGGAATTTTATTGTTGGTGATTTGCTGTGTCCAGTTTCTATCGATCAGTG
ATCAGAAGGATCATTTTTTGACCTATTTTTTCAGCTGGGAAGTCTCTGTA
TGgGGTCTGGTACTGGGCGTGTTTCTGATTCGGTTCATTGCTCTTGGCTC
AGATATCAACAGGAAGTATCGAAACAGTTCCATTCTGCTTACCGAACAAA
TCAATTTATACCTGCAAATGGAAAAGAACCCTGAAAAGAAAGAGGAACTA
CTCATTGCAAATAATGTATTGAAACTAGCCTCCGATCTTCTAAAGgaaCT
AGACGGTTCATTCAAGATTTCTGGCTTCATAATGAATCCCCTATTATCAA
ACATTACTCGAGTGGTTGTAATGTCATTATTCTCTGGTGTAATGTCTGAT
ATCCTTGGATTCCGTTTAAGGCTGTGGAAGATTAAGGCGTAGATGTATGC
GAAATTCTTCAGTGCGTTGACATCAACACGACGAGCACGTCGAAACCAGG
TGCCACACTTTCGACTACACaaagtgaaaaatatcaaaGCATGGTTGTCA
CTCCGATCCTTTTTGAAGAAACGTGGCCCACAGCGCTCAGTGGATACAAT
AGTCTCTGCAGCTTTCATCTTGGGAATTTTATTGTTGGTGATTTGCTGTG
TCCAGTTTCTATCGATCAGTGATCAGAAGGATCATTTTTTGACCTATTTT
TTCAGCTGGGAAGTCTCTGTATGgGGTCTGGTACTGGGCGTGTTTCTGAT
TCGGTTCATTGCTCTTGGCTCAGATATCAACAGGAAGTATCGAAACAGTT
CCATTCTGCTTACCGAACAAATCAATTTATACCTGCAAATGGAAAAGAAC
CCTGAAAAGAAAGAGGAACTACTCATTGCAAATAATGTATTGAAACTAGC
CTCCGATCTTCTAAAGgaaCTAGACGGTTCATTCAAGATTTCTGGCTTCA
TAATGAATCCCCTATTATCAAACATTACTCGAGTGGTTGTAATGTCATTA
TTCTCTGGTGTAATGTCTGATATCCTTGGATTCCGTTTAAGGCTGTGGAA
GATTAAGGCGTAGATGTATGCGAAATTCTTCAGTGCGTTGACATCAACAC
GACGAGCACGTCGAAACCAGGTGCCACACTTTCGACTACACaaagtgaaa
aatatcaaaGCATGGTTGTCACTCCGATCCTTTTTGAAGAAACGTGGCCC
ACAGCGCTCAGTGGATACAATAGTCTCTGCAGCTTTCATCTTGGGAATTT
TATTGTTGGTGATTTGCTGTGTCCAGTTTCTATCGATCAGTGATCAGAAG
GATCATTTTTTGACCTATTTTTTCAGCTGGGAAGTCTCTGTATGgGGTCT
GGTACTGGGCGTGTTTCTGATTCGGTTCATTGCTCTTGGCTCAGATATCA
ACAGGAAGTATCGAAACAGTTCCATTCTGCTTACCGAACAAATCAATTTA
TACCTGCAAATGGAAAAGAACCCTGAAAAGAAAGAGGAACTACTCATTGC
AAATAATGTATTGAAACTAGCCTCCGATCTTCTAAAGgaaCTAGACGGTT
CATTCAAGATTTCTGGCTTCATAATGAATCCCCTATTATCAAACATTACT
CGAGTGGTTGTAATGTCATTATTCTCTGGTGTAATGTCTGATATCCTTGG
ATTCCGTTTAAGGCTGTGGAAGATTAAGGCGTAGATGTATGCGAAATTCT
TCAGTGCGTTGACATCAACACGACGAGCACGTCGAAACCAGGTGCCACAC
TTTCGACTACACaaagtgaaaaatatcaaaGCATGGTTGTCACTCCGATC
CTTTTTGAAGAAACGTGGCCCACAGCGCTCAGTGGATACAATAGTCTCTG
CAGCTTTCATCTTGGGAATTTTATTGTTGGTGATTTGCTGTGTCCAGTTT
CTATCGATCAGTGATCAGAAGGATCATTTTTTGACCTATTTTTTCAGCTG
GGAAGTCTCTGTATGgGGTCTGGTACTGGGCGTGTTTCTGATTCGGTTCA
TTGCTCTTGGCTCAGATATCAACAGGAAGTATCGAAACAGTTCCATTCTG
CTTACCGAACAAATCAATTTATACCTGCAAATGGAAAAGAACCCTGAAAA
GAAAGAGGAACTACTCATTGCAAATAATGTATTGAAACTAGCCTCCGATC
TTCTAAAGgaaCTAGACGGTTCATTCAAGATTTCTGGCTTCATAATGAAT
CCCCTATTATCAAACATTACTCGAGTGGTTGTAATGTCATTATTCTCTGG
TGTAATGTCTGATATCCTTGGATTCCGTTTAAGGCTGTGGAAGATTAAGG
CGTAGATGTATGCGAAATTCTTCAGTGCGTTGACATCAACACGACGAGCA
CGTCGAAACCAGGTGCCACACTTTCGACTACACaaagtgaaaaatatcaa
aGCATGGTTGTCACTCCGATCCTTTTTGAAGAAACGTGGCCCACAGCGCT
CAGTGGATACAATAGTCTCTGCAGCTTTCATCTTGGGAATTTTATTGTTG
GTGATTTGCTGTGTCCAGTTTCTATCGATCAGTGATCAGAAGGATCATTT
TTTGACCTATTTTTTCAGCTGGGAAGTCTCTGTATGgGGTCTGGTACTGG
GCGTGTTTCTGATTCGGTTCATTGCTCTTGGCTCAGATATCAACAGGAAG
TATCGAAACAGTTCCATTCTGCTTACCGAACAAATCAATTTATACCTGCA
AATGGAAAAGAACCCTGAAAAGAAAGAGGAACTACTCATTGCAAATAATG
TATTGAAACTAGCCTCCGATCTTCTAAAGgaaCTAGACGGTTCATTCAAG
ATTTCTGGCTTCATAATGAATCCCCTATTATCAAACATTACTCGAGTGGT
TGTAATGTCATTATTCTCTGGTGTAATGTCTGATATCCTTGGATTCCGTT
TAAGGCTGTGGAAGATTAAGGCGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013212-exon-sc0000163-1491911889:387180..387798 | TCONS_00013212-exon-sc0000163-1491911889:387180..387798 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1510915933:387180..387798 | TCONS_00013212-exon-sc0000163-1510915933:387180..387798 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1575043694:387180..387798 | TCONS_00013212-exon-sc0000163-1575043694:387180..387798 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1491911889:388262..388416 | TCONS_00013212-exon-sc0000163-1491911889:388262..388416 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1510915933:388262..388416 | TCONS_00013212-exon-sc0000163-1510915933:388262..388416 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1575043694:388262..388416 | TCONS_00013212-exon-sc0000163-1575043694:388262..388416 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1491911889:389162..389258 | TCONS_00013212-exon-sc0000163-1491911889:389162..389258 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1510915933:389162..389258 | TCONS_00013212-exon-sc0000163-1510915933:389162..389258 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1575043694:389162..389258 | TCONS_00013212-exon-sc0000163-1575043694:389162..389258 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1491911889:390407..390502 | TCONS_00013212-exon-sc0000163-1491911889:390407..390502 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1510915933:390407..390502 | TCONS_00013212-exon-sc0000163-1510915933:390407..390502 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1575043694:390407..390502 | TCONS_00013212-exon-sc0000163-1575043694:390407..390502 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1491911889:390830..390955 | TCONS_00013212-exon-sc0000163-1491911889:390830..390955 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1510915933:390830..390955 | TCONS_00013212-exon-sc0000163-1510915933:390830..390955 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1575043694:390830..390955 | TCONS_00013212-exon-sc0000163-1575043694:390830..390955 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1491911889:391505..393325 | TCONS_00013212-exon-sc0000163-1491911889:391505..393325 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1510915933:391505..393325 | TCONS_00013212-exon-sc0000163-1510915933:391505..393325 | Clytia hemisphaerica | exon |
| TCONS_00013212-exon-sc0000163-1575043694:391505..393325 | TCONS_00013212-exon-sc0000163-1575043694:391505..393325 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000163 | supercontig | sc0000163:387180..393325 + |
Blast
BLAST of TCONS_00013212 vs. Swiss-Prot (Human)
Match: PHTF2 (Putative homeodomain transcription factor 2 OS=Homo sapiens GN=PHTF2 PE=2 SV=2) HSP 1 Score: 252.677 bits (644), Expect = 7.708e-71 Identity = 130/221 (58.82%), Postives = 170/221 (76.92%), Query Frame = 2
Query: 449 FSMLLVIYFFFT*RYMYAKFFSALTSTRRARRNQVPHFRLHKVKNIKAWLSLRSFLKKRGPQRSVDTIVSAAFXXXXXXXXXXXXQFLSISDQKDHFLTYFFSWEVSVWGLVLGVFLIRFIALGSDINRKYRNSSILLTEQINLYLQMEKNPEKKEELLIANNVLKLASDLLKELDGSFKISGFIMNPLLSNITRVVVMSLFSGVMSDILGFRLRLWKIKA 1111
F +L V + R ++AK F LTS RRAR+++VPHFRL KV+NIK WLSLRS+LK+RGPQRSVD IVS+AF+L I ++ ICC Q L + + FL ++WE+ +W + L +FL+RF+ LGS+ ++KY N+SILLTEQINLYL+MEK P KKEEL + NNVLKLA+ LLKELD F++ G MNPLL NIT+VV++S SGV+SD+LGF L+LWKIK+
Sbjct: 568 FFLLCVAERTYKQRLLFAKLFGHLTSARRARKSEVPHFRLKKVQNIKMWLSLRSYLKRRGPQRSVDVIVSSAFLLTISVVFICCAQLLHVHEI---FLDCHYNWELVIWCISLTLFLLRFVTLGSETSKKYSNTSILLTEQINLYLKMEKKPNKKEELTLVNNVLKLATKLLKELDSPFRLYGLTMNPLLYNITQVVILSAVSGVISDLLGFNLKLWKIKS 785
The following BLAST results are available for this feature:
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