TCONS_00013197 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013197
Unique NameTCONS_00013197
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3321

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013197 ID=TCONS_00013197|Name=TCONS_00013197|organism=Clytia hemisphaerica|type=transcript|length=3321bp
CGCTGTTGCCAGAGATGCTCATGGTCATAGAATATTTTAGCACTTTCAAT
GGAAATGAGTCTGTTctaaaatttgttcttttttcagaaagaaaatgaag
aaagttcCCTCAATATTGTTAGTGACACTGATAGCAGTTATTGATTTGTT
GGCATGTATTCTCATTTTTGTGTTACTGGAAGACCAAAAAGAAATCGGTG
ATGAAATATTTTCCTTCTCATATGGTGGCTCCACCTTTGATTTAGTCATC
TGGTCATGCTTCAGATTGTGTATTTTCTTGGGTGCTTCAATCGGGCTTGT
ACGTAATCCTGATTCAGTGAAAAAGTTTCGAAAGTCCACAAAAATGATGG
TTTATTATGGATGTGGGCAAGCCATTTATGTTGTTCTCAAAATCATGTTT
TTTACTGAATACAATATGGATAAAATGGGGAAACGTGTATGGCTGCTGAT
CGGTATCTCACTATTCACTTGTTTGACGCCATATATAGGTTGGAAAATTT
ATGCAGATGTACCAATTGTAAAGAGAAAACAAGGCTTCACCTCCATTAAT
GATGATGGTGATGATACTGATAGTATTAAAAGCGACGATAGTGAAAAAGA
GGAAAATCTAAACGCTCTTGATAAAGAAGTTGCTGATCAATACGGTTCAT
TTCACAGTATTCGCCAACTTGTTGCACTTGCAAAAGATGACTTACCTTAT
GTTATGATCGCCATTTTTTCATTGTTGTTATGTTCTGCAGCTCAAATATT
TCTTCCCTACTACACTGGACAAGTGTTGAATTATATCGTTATTGATCGGT
CAGTAGAGAAATTTAAAGAAGCAATGTTATACATGGCAATCATTACTTTG
GCTGCAGGTTTTTTCTCTGGCACAAGAGCAGGTTTCTTCACACTGGTCTT
TGCAAGGTACGTGTTACGTCTTCAAAAACAATTATTTGAAAGCATTATGA
AAATGGAGATTGGATTTTTTGATGTTCGAAAGACTGGCGAGATTACATCA
CGTTTGACCTCAGACTGTACAAAAGTTGGCGATGGACTTGGGttgaattt
taatattttcttgcgCAGTATTGTCCGAGTCATTGGTATTCTTGCCTTCA
TGCTCAAAATTTCATGGCGATTAAGTATAGTGACATTAGTCAGCGTCCCG
GTGATTGGCATATTATCCGAAGCATTTGGTGATAAGTATAGGAAACTTGC
TGAACAGGTGCAAAACTCTTTAGCAGTTGCAAACGAGAGTGCGGAAGAAG
CCATTTCATGTATGAGAACTGTTCGCAGTTTTGCTGCAGAAAGTGAGGAA
GTGGACCGGTACAGTGAACATCTCCAAAAGACgtataaaattcgtgttaa
agAAGCTATTCTTGTTTGTGGATATCNCGCAGAAGAAGCTATTTCATGTA
TGAGAACTGTTCGCAGTTTTGCTGCAGAAAGTGAGGAAGTGGACCGGTAC
AGTGAACATCTCCAAAAGACgtataaaattcgtgttaaagAAGCTATTCT
TGTTTGTGGATATCGCTGGTCAACTGAGCTCACCGACTTAACTATGACAT
TGATTATCTTGTACTTTGGTGGACAATTAGTGTTTCGAAATGAACTTTCT
GGGGGTCATttagtttcttttattttatatagTATGGACCTTGGGTATGC
TATTGATGATATTGGTAATGTTTATACAGGCTTAATGGAAGCTGTTGGTG
CTTCAAAGAAAATCCTTGTTTACATGCAGCGTGAGCCAAAAATCACCTAC
GATGGGAATCAATCGCCAGATTCTGGAATCGATGGTCACATTCAGTTTAA
AGATGTCTCCTTTTCCTACCCTTCACGACCTGATATTCCTGTTTTAGACA
AGATTAACTTTACAGTGAACAAAGGGGAGGTTGTTGCTTTGGTTGGTCCA
AGTGGTGGAGGGAAATCTTCCATTATAAACCTTTTGGAACATTTTTATGA
GCCGACCAAAGGACAAGTTTTGATTGATAATATTGATGTAAAAAACTACG
ACCATAATTTCATTCACACCACTATGAGTTTAGTCCAACAAGAACCAGTC
TTGTTCGCTCGTAagatatctgaaaatatcaattATGGTCTGAAACCGAA
AGCAGATCAAGATTTGATTAAGAATTCAGCAATAATGGCCAACGCTCACG
ATTTTGTTGATGATCTACCAGAGAAATATGCTACAGAAACAGGGGAGAAA
GGAGTACAGTTATCTGGTGGGCAAAAACAACGCGTTGCTATTGCAAGAGC
TTTAATACGAAATCCAACGATTCTTATTCTGGATGAAGCCACGAGTGCGC
TAGATTCTGAATCAGAATACATTGTACAGCAAGCAATCAATAAGAACCTG
ACCGGACGTACTGTTTTATTGATTGCACATCGATTGAGTACGGTTGAGAA
AGCAGACAAAATTCTTGTGATTGAAAAAGGTAAAATTGTTGAGGAAGGGA
ACCACAAGGATTTGGTGGATAAAGGAGGCGTTTACTCAGCTCTGGTGCAA
CGCCAATTATTAGGTTACGATGACGAACACACCCGTGGTGGATCCAGAAA
AATTGATATCCATAAAAGTGATGATAGATCGCATCCTAAAGGTAGTCCAG
AAAAACATTCCTATTCTGTGTCACCAGTTCGTTGTTGATGATTTGGAATA
CAGATTTTGTTTATAGTACAGGGTTTATAAAAGTTTCTTTCCTAAAGTCT
GTCcaaatataattggcagtggaaacaagaatgcctgtaacttttgataa
tcaaatataattatggaaatttttttttttgcttgtttcagagaatcaaa
agcgctatatttaaatgtatttttggttgaaaattcgcgatttttatcgg
ataaatttgcgattgtaaaaattgaacttttattctacttatgctataac
tttcatttttacatcagtggtagttcaactttaggttaagaagtttatta
aatttcaaggcaaacagaaaagtccttcggaaaatatgagacccgaaata
ccccttggtagcacttttttgtgaaatatcaaatctccaacttattacta
aaaacgggggtagtgatagtTTTTCGATCAtgacacattttacgatctct
ttaatgacctcatagccaaactgtgcttagtgttttgggaattagcaaag
ttctttaatgacttaaaaataacaaaggcaatttaagttcatgcttatct
tttcaataaaatcacttcctttcgaaataatcaatgataccaataatacc
aatgcaccaacacttaacattttccaacttttaattgcactgttcaaaaa
agataacataacccccgtttt
Run BLAST on NCBI

protein sequence of TCONS_00013197-protein

>TCONS_00013197-protein ID=TCONS_00013197-protein|Name=TCONS_00013197-protein|organism=Clytia hemisphaerica|type=polypeptide|length=847bp
MKKVPSILLVTLIAVIDLLACILIFVLLEDQKEIGDEIFSFSYGGSTFDL
VIWSCFRLCIFLGASIGLVRNPDSVKKFRKSTKMMVYYGCGQAIYVVLKI
MFFTEYNMDKMGKRVWLLIGISLFTCLTPYIGWKIYADVPIVKRKQGFTS
INDDGDDTDSIKSDDSEKEENLNALDKEVADQYGSFHSIRQLVALAKDDL
PYVMIAIFSLLLCSAAQIFLPYYTGQVLNYIVIDRSVEKFKEAMLYMAII
TLAAGFFSGTRAGFFTLVFARYVLRLQKQLFESIMKMEIGFFDVRKTGEI
TSRLTSDCTKVGDGLGLNFNIFLRSIVRVIGILAFMLKISWRLSIVTLVS
VPVIGILSEAFGDKYRKLAEQVQNSLAVANESAEEAISCMRTVRSFAAES
EEVDRYSEHLQKTYKIRVKEAILVCGYXAEEAISCMRTVRSFAAESEEVD
RYSEHLQKTYKIRVKEAILVCGYRWSTELTDLTMTLIILYFGGQLVFRNE
LSGGHLVSFILYSMDLGYAIDDIGNVYTGLMEAVGASKKILVYMQREPKI
TYDGNQSPDSGIDGHIQFKDVSFSYPSRPDIPVLDKINFTVNKGEVVALV
GPSGGGKSSIINLLEHFYEPTKGQVLIDNIDVKNYDHNFIHTTMSLVQQE
PVLFARKISENINYGLKPKADQDLIKNSAIMANAHDFVDDLPEKYATETG
EKGVQLSGGQKQRVAIARALIRNPTILILDEATSALDSESEYIVQQAINK
NLTGRTVLLIAHRLSTVEKADKILVIEKGKIVEEGNHKDLVDKGGVYSAL
VQRQLLGYDDEHTRGGSRKIDIHKSDDRSHPKGSPEKHSYSVSPVRC
Run BLAST on NCBI

transcript from alignment at sc0000162:456661..459981

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013197 ID=TCONS_00013197|Name=TCONS_00013197|organism=Clytia hemisphaerica|type=transcript|length=3321bp|location=Sequence derived from alignment at sc0000162:456661..459981 (Clytia hemisphaerica)
aaaacgggggttatgttatcttttttgaacagtgcaattaaaagttggaa aatgttaagtgttggtgcattggtattattggtatcattgattatttcga aaggaagtgattttattgaaaagataagcatgaacttaaattgcctttgt tatttttaagtcattaaagaactttgctaattcccaaaacactaagcaca gtttggctatgaggtcattaaagagatcgtaaaatgtgtcaTGATCGAAA Aactatcactacccccgtttttagtaataagttggagatttgatatttca caaaaaagtgctaccaaggggtatttcgggtctcatattttccgaaggac ttttctgtttgccttgaaatttaataaacttcttaacctaaagttgaact accactgatgtaaaaatgaaagttatagcataagtagaataaaagttcaa tttttacaatcgcaaatttatccgataaaaatcgcgaattttcaaccaaa aatacatttaaatatagcgcttttgattctctgaaacaagcaaaaaaaaa aatttccataattatatttgattatcaaaagttacaggcattcttgtttc cactgccaattatatttgGACAGACTTTAGGAAAGAAACTTTTATAAACC CTGTACTATAAACAAAATCTGTATTCCAAATCATCAACAACGAACTGGTG ACACAGAATAGGAATGTTTTTCTGGACTACCTTTAGGATGCGATCTATCA TCACTTTTATGGATATCAATTTTTCTGGATCCACCACGGGTGTGTTCGTC ATCGTAACCTAATAATTGGCGTTGCACCAGAGCTGAGTAAACGCCTCCTT TATCCACCAAATCCTTGTGGTTCCCTTCCTCAACAATTTTACCTTTTTCA ATCACAAGAATTTTGTCTGCTTTCTCAACCGTACTCAATCGATGTGCAAT CAATAAAACAGTACGTCCGGTCAGGTTCTTATTGATTGCTTGCTGTACAA TGTATTCTGATTCAGAATCTAGCGCACTCGTGGCTTCATCCAGAATAAGA ATCGTTGGATTTCGTATTAAAGCTCTTGCAATAGCAACGCGTTGTTTTTG CCCACCAGATAACTGTACTCCTTTCTCCCCTGTTTCTGTAGCATATTTCT CTGGTAGATCATCAACAAAATCGTGAGCGTTGGCCATTATTGCTGAATTC TTAATCAAATCTTGATCTGCTTTCGGTTTCAGACCATaattgatattttc agatatctTACGAGCGAACAAGACTGGTTCTTGTTGGACTAAACTCATAG TGGTGTGAATGAAATTATGGTCGTAGTTTTTTACATCAATATTATCAATC AAAACTTGTCCTTTGGTCGGCTCATAAAAATGTTCCAAAAGGTTTATAAT GGAAGATTTCCCTCCACCACTTGGACCAACCAAAGCAACAACCTCCCCTT TGTTCACTGTAAAGTTAATCTTGTCTAAAACAGGAATATCAGGTCGTGAA GGGTAGGAAAAGGAGACATCTTTAAACTGAATGTGACCATCGATTCCAGA ATCTGGCGATTGATTCCCATCGTAGGTGATTTTTGGCTCACGCTGCATGT AAACAAGGATTTTCTTTGAAGCACCAACAGCTTCCATTAAGCCTGTATAA ACATTACCAATATCATCAATAGCATACCCAAGGTCCATActatataaaat aaaagaaactaaATGACCCCCAGAAAGTTCATTTCGAAACACTAATTGTC CACCAAAGTACAAGATAATCAATGTCATAGTTAAGTCGGTGAGCTCAGTT GACCAGCGATATCCACAAACAAGAATAGCTTctttaacacgaattttata cGTCTTTTGGAGATGTTCACTGTACCGGTCCACTTCCTCACTTTCTGCAG CAAAACTGCGAACAGTTCTCATACATGAAATAGCTTCTTCTGCGNGATAT CCACAAACAAGAATAGCTTctttaacacgaattttatacGTCTTTTGGAG ATGTTCACTGTACCGGTCCACTTCCTCACTTTCTGCAGCAAAACTGCGAA CAGTTCTCATACATGAAATGGCTTCTTCCGCACTCTCGTTTGCAACTGCT AAAGAGTTTTGCACCTGTTCAGCAAGTTTCCTATACTTATCACCAAATGC TTCGGATAATATGCCAATCACCGGGACGCTGACTAATGTCACTATACTTA ATCGCCATGAAATTTTGAGCATGAAGGCAAGAATACCAATGACTCGGACA ATACTGcgcaagaaaatattaaaattcaaCCCAAGTCCATCGCCAACTTT TGTACAGTCTGAGGTCAAACGTGATGTAATCTCGCCAGTCTTTCGAACAT CAAAAAATCCAATCTCCATTTTCATAATGCTTTCAAATAATTGTTTTTGA AGACGTAACACGTACCTTGCAAAGACCAGTGTGAAGAAACCTGCTCTTGT GCCAGAGAAAAAACCTGCAGCCAAAGTAATGATTGCCATGTATAACATTG CTTCTTTAAATTTCTCTACTGACCGATCAATAACGATATAATTCAACACT TGTCCAGTGTAGTAGGGAAGAAATATTTGAGCTGCAGAACATAACAACAA TGAAAAAATGGCGATCATAACATAAGGTAAGTCATCTTTTGCAAGTGCAA CAAGTTGGCGAATACTGTGAAATGAACCGTATTGATCAGCAACTTCTTTA TCAAGAGCGTTTAGATTTTCCTCTTTTTCACTATCGTCGCTTTTAATACT ATCAGTATCATCACCATCATCATTAATGGAGGTGAAGCCTTGTTTTCTCT TTACAATTGGTACATCTGCATAAATTTTCCAACCTATATATGGCGTCAAA CAAGTGAATAGTGAGATACCGATCAGCAGCCATACACGTTTCCCCATTTT ATCCATATTGTATTCAGTAAAAAACATGATTTTGAGAACAACATAAATGG CTTGCCCACATCCATAATAAACCATCATTTTTGTGGACTTTCGAAACTTT TTCACTGAATCAGGATTACGTACAAGCCCGATTGAAGCACCCAAGAAAAT ACACAATCTGAAGCATGACCAGATGACTAAATCAAAGGTGGAGCCACCAT ATGAGAAGGAAAATATTTCATCACCGATTTCTTTTTGGTCTTCCAGTAAC ACAAAAATGAGAATACATGCCAACAAATCAATAACTGCTATCAGTGTCAC TAACAATATTGAGGgaactttcttcattttctttctgaaaaaagaacaaa ttttagAACAGACTCATTTCCATTGAAAGTGCTAAAATATTCTATGACCA TGAGCATCTCTGGCAACAGCG

Coding sequence (CDS) from alignment at sc0000162:456661..459981

>TCONS_00013197 ID=TCONS_00013197|Name=TCONS_00013197|organism=Clytia hemisphaerica|type=CDS|length=2544bp|location=Sequence derived from alignment at sc0000162:456661..459981 (Clytia hemisphaerica)
TCAACAACGAACTGGTGACACAGAATAGGAATGTTTTTCTGGACTACCTT
TAGGATGCGATCTATCATCACTTTTATGGATATCAATTTTTCTGGATCCA
CCACGGGTGTGTTCGTCATCGTAACCTAATAATTGGCGTTGCACCAGAGC
TGAGTAAACGCCTCCTTTATCCACCAAATCCTTGTGGTTCCCTTCCTCAA
CAATTTTACCTTTTTCAATCACAAGAATTTTGTCTGCTTTCTCAACCGTA
CTCAATCGATGTGCAATCAATAAAACAGTACGTCCGGTCAGGTTCTTATT
GATTGCTTGCTGTACAATGTATTCTGATTCAGAATCTAGCGCACTCGTGG
CTTCATCCAGAATAAGAATCGTTGGATTTCGTATTAAAGCTCTTGCAATA
GCAACGCGTTGTTTTTGCCCACCAGATAACTGTACTCCTTTCTCCCCTGT
TTCTGTAGCATATTTCTCTGGTAGATCATCAACAAAATCGTGAGCGTTGG
CCATTATTGCTGAATTCTTAATCAAATCTTGATCTGCTTTCGGTTTCAGA
CCATaattgatattttcagatatctTACGAGCGAACAAGACTGGTTCTTG
TTGGACTAAACTCATAGTGGTGTGAATGAAATTATGGTCGTAGTTTTTTA
CATCAATATTATCAATCAAAACTTGTCCTTTGGTCGGCTCATAAAAATGT
TCCAAAAGGTTTATAATGGAAGATTTCCCTCCACCACTTGGACCAACCAA
AGCAACAACCTCCCCTTTGTTCACTGTAAAGTTAATCTTGTCTAAAACAG
GAATATCAGGTCGTGAAGGGTAGGAAAAGGAGACATCTTTAAACTGAATG
TGACCATCGATTCCAGAATCTGGCGATTGATTCCCATCGTAGGTGATTTT
TGGCTCACGCTGCATGTAAACAAGGATTTTCTTTGAAGCACCAACAGCTT
CCATTAAGCCTGTATAAACATTACCAATATCATCAATAGCATACCCAAGG
TCCATActatataaaataaaagaaactaaATGACCCCCAGAAAGTTCATT
TCGAAACACTAATTGTCCACCAAAGTACAAGATAATCAATGTCATAGTTA
AGTCGGTGAGCTCAGTTGACCAGCGATATCCACAAACAAGAATAGCTTct
ttaacacgaattttatacGTCTTTTGGAGATGTTCACTGTACCGGTCCAC
TTCCTCACTTTCTGCAGCAAAACTGCGAACAGTTCTCATACATGAAATAG
CTTCTTCTGCGNGATATCCACAAACAAGAATAGCTTctttaacacgaatt
ttatacGTCTTTTGGAGATGTTCACTGTACCGGTCCACTTCCTCACTTTC
TGCAGCAAAACTGCGAACAGTTCTCATACATGAAATGGCTTCTTCCGCAC
TCTCGTTTGCAACTGCTAAAGAGTTTTGCACCTGTTCAGCAAGTTTCCTA
TACTTATCACCAAATGCTTCGGATAATATGCCAATCACCGGGACGCTGAC
TAATGTCACTATACTTAATCGCCATGAAATTTTGAGCATGAAGGCAAGAA
TACCAATGACTCGGACAATACTGcgcaagaaaatattaaaattcaaCCCA
AGTCCATCGCCAACTTTTGTACAGTCTGAGGTCAAACGTGATGTAATCTC
GCCAGTCTTTCGAACATCAAAAAATCCAATCTCCATTTTCATAATGCTTT
CAAATAATTGTTTTTGAAGACGTAACACGTACCTTGCAAAGACCAGTGTG
AAGAAACCTGCTCTTGTGCCAGAGAAAAAACCTGCAGCCAAAGTAATGAT
TGCCATGTATAACATTGCTTCTTTAAATTTCTCTACTGACCGATCAATAA
CGATATAATTCAACACTTGTCCAGTGTAGTAGGGAAGAAATATTTGAGCT
GCAGAACATAACAACAATGAAAAAATGGCGATCATAACATAAGGTAAGTC
ATCTTTTGCAAGTGCAACAAGTTGGCGAATACTGTGAAATGAACCGTATT
GATCAGCAACTTCTTTATCAAGAGCGTTTAGATTTTCCTCTTTTTCACTA
TCGTCGCTTTTAATACTATCAGTATCATCACCATCATCATTAATGGAGGT
GAAGCCTTGTTTTCTCTTTACAATTGGTACATCTGCATAAATTTTCCAAC
CTATATATGGCGTCAAACAAGTGAATAGTGAGATACCGATCAGCAGCCAT
ACACGTTTCCCCATTTTATCCATATTGTATTCAGTAAAAAACATGATTTT
GAGAACAACATAAATGGCTTGCCCACATCCATAATAAACCATCATTTTTG
TGGACTTTCGAAACTTTTTCACTGAATCAGGATTACGTACAAGCCCGATT
GAAGCACCCAAGAAAATACACAATCTGAAGCATGACCAGATGACTAAATC
AAAGGTGGAGCCACCATATGAGAAGGAAAATATTTCATCACCGATTTCTT
TTTGGTCTTCCAGTAACACAAAAATGAGAATACATGCCAACAAATCAATA
ACTGCTATCAGTGTCACTAACAATATTGAGGgaactttcttcat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007378XLOC_007378Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013197-proteinTCONS_00013197-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013197-exon-sc0000162-1491911889:456661..459981TCONS_00013197-exon-sc0000162-1491911889:456661..459981Clytia hemisphaericaexon
TCONS_00013197-exon-sc0000162-1510915933:456661..459981TCONS_00013197-exon-sc0000162-1510915933:456661..459981Clytia hemisphaericaexon
TCONS_00013197-exon-sc0000162-1575043694:456661..459981TCONS_00013197-exon-sc0000162-1575043694:456661..459981Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000162supercontigsc0000162:456661..459981 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.44292 2.61463 2.61531 3.28207 13.708 9.89353 10.8264 11.6915 5.70867 6.83961 6.12251 4.11177 5.04436 5.03308 5.24223 4.65928 5.84523 4.98435 4.71444 5.92999 5.65174 4.68346 5.53958 6.47825 7.98908 10.2915 6.76818 3.95496 7.18623 6.35923
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR011527ABC1_TM_dom
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0016887ATPase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0005524 ATP binding
Blast
BLAST of TCONS_00013197 vs. Swiss-Prot (Human)
Match: ABCB9 (ATP-binding cassette sub-family B member 9 OS=Homo sapiens GN=ABCB9 PE=1 SV=1)

HSP 1 Score: 581.252 bits (1497), Expect = 0.000e+0
Identity = 307/808 (38.00%), Postives = 493/808 (61.01%), Query Frame = 2
Query:   95 MKKVPSILLVTLIAVIDLLACILIFVLLEDQKEIGDEIFSFSYGGSTFDLVIWSCFRLCIFLGASIGLVRNPD-SVKKFRKSTKMMVYYGCGQAIYVVLKIMFFTEYNMDKMGKRVWLLIGISLFTCLTPYIGWKIYADVPIVKRKQGFXXXXXXXXXXXXXXXXXXXXXXXLNALDKEVADQYGSFHSIRQLVALAKDDLPYVMIAIFSLLLCSAAQIFLPYYTGQVLNYIVIDRSVEKFKEAMLYMAIITLAAGFFSGTRAGFFTLVFARYVLRLQKQLFESIMKMEIGFFDVRKTGEITSRLTSDCTKVGDGLGLNFNIFLRSIVRVIGILAFMLKISWRLSIVTLVSVPVIGILSEAFGDKYRKLAEQVQNSLAVANESAEEAISCMRTVRSFAAESEEVDRYSEHLQKTYKIRVKEAILVCGYXAEEAISCMRTVRSFAAESEEVDRYSEHLQKTYKIRVKEAILVCGYRWSTELTDLTMTLIILYFGGQLVFRNELSGGHLVSFILYSMDLGYAIDDIGNVYTGLMEAVGASKKILVYMQREPKITYDGNQSPDSGIDGHIQFKDVSFSYPSRPDIPVLDKINFTVNKGEVVALVGPSGGGKSSIINLLEHFYEPTKGQVLIDNIDVKNYDHNFIHTTMSLVQQEPVLFARKISENINYGLKPKADQDLIKNSAIMANAHDFVDDLPEKYATETGEKGVQLSGGQKQRVAIARALIRNPTILILDEATSALDSESEYIVQQAINKNLTGRTVLLIAHRLSTVEKADKILVIEKGKIVEEGNHKDLVDKGGVYSALVQRQLLG 2515
            M+   ++++      +D+     I+V     + + ++I  F+   S  DL     +R C+ LGA+IG+ +N     ++ R S  ++        IY ++K++ F+E          W L   +  +    ++ W + + V     + G          T +++   + + E      +   +Q  S  ++++L++  K D+ +++ A F L++ +  + FLPYYTG+ ++ IVI +S+++F  A++ + ++ + + F +G R G FTL+FAR  +RL+  LF S++  E  FFD  +TG++ SRLTSD T V D +  N N+FLR+ V+V G++ FM  +SW+LS+VT +  P+I ++S  +G  Y++L+++VQN+LA A+ +                                              AEE IS M+TVRSFA E EE + Y   LQ+ YK+  KEA     Y W + LT L + + ILY+GG LV   +++ G+L++FI+Y   LG  ++ +G+VY+GLM+ VGA++K+  ++ R+P + +DG+ +PD  ++G + F++V+F+Y +RP   VL  ++F+++ G+V ALVGPSG GKSS +N+LE+FY    G+VL+D   +  YDH ++H  +SLV QEPVLFAR I++NI+YGL P    +++  +A  ANAH F+ +L + Y+TETGEKG QLSGGQKQRVA+ARAL+RNP +LILDEATSALD+ESEY++QQAI+ NL   TVL+IAHRLSTVE A  I+V++KG++V++G H+ L+ +GG+Y+ LVQRQ+LG
Sbjct:    1 MRLWKAVVVTLAFMSVDICVTTAIYVFSHLDRSLLEDIRHFNIFDSVLDLWAACLYRSCLLLGATIGVAKNSALGPRRLRASWLVITLVCLFVGIYAMVKLLLFSEVRRPIRDPWFWALFVWTYISLGASFLLWWLLSTV-----RPG----------TQALEPGAATEAEGFPGSGRPPPEQ-ASGATLQKLLSYTKPDVAFLVAASFFLIVAALGETFLPYYTGRAIDGIVIQKSMDQFSTAVVIVCLLAIGSSFAAGIRGGIFTLIFARLNIRLRNCLFRSLVSQETSFFDENRTGDLISRLTSDTTMVSDLVSQNINVFLRNTVKVTGVVVFMFSLSWQLSLVTFMGFPIIMMVSNIYGKYYKRLSKEVQNALARASNT----------------------------------------------AEETISAMKTVRSFANEEEEAEVYLRKLQQVYKLNRKEAAAYMYYVWGSGLTLLVVQVSILYYGGHLVISGQMTSGNLIAFIIYEFVLGDCMESVGSVYSGLMQGVGAAEKVFEFIDRQPTMVHDGSLAPDH-LEGRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDGKPISAYDHKYLHRVISLVSQEPVLFARSITDNISYGL-PTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLIIAHRLSTVEHAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQRQMLG 744          
The following BLAST results are available for this feature:
BLAST of TCONS_00013197 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABCB90.000e+038.00ATP-binding cassette sub-family B member 9 OS=Homo... [more]
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