TCONS_00013165 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013165
Unique NameTCONS_00013165
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1799

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013165 ID=TCONS_00013165|Name=TCONS_00013165|organism=Clytia hemisphaerica|type=transcript|length=1799bp
NAAGGAAAATTCAGTTGATCAATCCAGCAGACTTCGCATCTCAAGTTACA
AACACCACCACTTTGTCTATACATTCTTTATTTACACTATAAAAGGTGTt
ggttttataagaaacaataCGTTTAATAAAGCCAAACCAAGTTGTATCGA
TGCGGAGTCTCATTTTTGGAAACTGCTTAAACCAGTTAAAACAGGAGCAG
CTTCGCAGATGTATTTATGGGTGTGCTAAAGGTGTTTCGATTGCACGTGA
AAGGAGAAACTTTTCAACTTCAACCAAGAAGCaacaaaaaattcttataa
caGGAAGCCTTGGACAACTAGGATTTGGAATTGCTAAAGAGCTTAGAAGA
AAATATGGGGATGAAAATATTGTTATGTCAGATGTTGTGAAAGCACCAAG
TGACATCTCAAATAGTGgacccttTCTTTATGCTGATATCTTAGATTACA
AAAACTTACAAAGTATTGTTGTTAACTACAACATAGACACTATTGTGCAT
CTCAGTGCCTTACTAAGTGCAATTGGAGAACATAACGTATCAGAAGCCTT
GAAAATCAACATTTATGGGTTTCATAACATCATCGAGTTATGTAGAAGAT
ATGGCTTAAAACTATTTTGTCCTAGTACTATTGGAGCTTTTGGACCTGAC
AGCCCAAGGAATCCAACTCCTGACCTTACAATACAACGCCCAAGGACAAT
CTATGGAGTTTCCAAAGTGCATATGGAATTAATGGGAGAGTATTATCATC
ACCGATATGGATTGGATTTTCGGTCATTAAGATATCCAGGCGTTATTTCA
GCATTCACTCAACCTGGAGGAGGAACGACAGATTATGCTGTTGATATTTT
TCACTGTGCATTAAAAACTGGCAAATTTGAGTGCAACTTGACAGAGAATA
CACGTTTGCCAATGATGTATATCGATGATGTCATCAAAGCTACTGCTAAT
ATGATTGATACACCtgaagaagaacttaaaattaGGACTTACAatatttC
TGCAATGAGTTTTACACCAAAAGAGATCAGTGAAGAAGTCAAAAAAATCA
TGcctgaatttgaaatttcatatgATGTTGATTCAGTACGACAAAAAATT
GCTGAAAGTTGGCCACAAGTTTTTGATGATCAAAATGCACGAAAAGATTG
GGGTTGGCAACATGATTTCGATCTGACAAAAATGTGCAAAGAAATGTTCA
GACTTCTTGGTCCTGGTTATGGTAAAGATATTTAATTCAATAAAAACGAA
AATCATTATAATttatattttccaattaagtattcattattcatttatat
tttgaactttgtgttctaattatgataaattatctGTCGTCTTTCAAACC
AACTAAAAAACAGGAACCTCTATGTATCCTAATTTACAAATACTCAAAAG
TCATTAGTCTTTTTTTGACGGAAATATTTGGATAATACTTAAGGTGCAGC
ATACGTACAACATCAATTTCCTGCATATTTTTTTAATAGCCTTTGAATTG
agtaaattttagaaattttatagTATTTATTATGTATGGATAATATGtta
aatatttaattttcttgccccattttatttttagttattCTAGTTGTGCA
CTTATTTTTcctcaagtttttttataatgttCTTAGTATTTATTCCAATG
AATATCAAAATAGATAATTTTTCACATTAAAGTTATTGGCATTCTTGCCA
AACTATTTTCTCTATTAATACCTTTAGGTTAAATTACTAGTAAACACAGC
TTGAGTGTTGTTCACGCGATTTCGGGCTCGCTTGTTGTCTTGATCTTTT
Run BLAST on NCBI

protein sequence of TCONS_00013165-protein

>TCONS_00013165-protein ID=TCONS_00013165-protein|Name=TCONS_00013165-protein|organism=Clytia hemisphaerica|type=polypeptide|length=361bp
MRSLIFGNCLNQLKQEQLRRCIYGCAKGVSIARERRNFSTSTKKQQKILI
TGSLGQLGFGIAKELRRKYGDENIVMSDVVKAPSDISNSGPFLYADILDY
KNLQSIVVNYNIDTIVHLSALLSAIGEHNVSEALKINIYGFHNIIELCRR
YGLKLFCPSTIGAFGPDSPRNPTPDLTIQRPRTIYGVSKVHMELMGEYYH
HRYGLDFRSLRYPGVISAFTQPGGGTTDYAVDIFHCALKTGKFECNLTEN
TRLPMMYIDDVIKATANMIDTPEEELKIRTYNISAMSFTPKEISEEVKKI
MPEFEISYDVDSVRQKIAESWPQVFDDQNARKDWGWQHDFDLTKMCKEMF
RLLGPGYGKDI
Run BLAST on NCBI

transcript from alignment at sc0000162:347518..350734-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013165 ID=TCONS_00013165|Name=TCONS_00013165|organism=Clytia hemisphaerica|type=transcript|length=3217bp|location=Sequence derived from alignment at sc0000162:347518..350734- (Clytia hemisphaerica)
NAAGGAAAATTCAGTTGATCAATCCAGCAGACTTCGCATCTCAAGTTACA
AACACCACCACTTTGTCTATACATTCTTTATTTACACTATAAAAGGTGTT
GGTTTTATAAGAAACAATACGTTTAATAAAGCCAAACCAAGTTGTATCGA
TGCGGAGTCTCATTTTTGGAAACTGCTTAAACCAGTTAAAACAGGAGCAG
CTTCGCAGATGTATTTATGGGTGTGCTAAAGGTGTTTCGATTGCACGTGA
AAGGAGAAACTTTTCAACTTCAACCAAGAAGCAACAAAAAATTCTTATAA
CAGGTTTGTTGATTTAAGATTTTTATTTCATTTGTAGGAATTTTTTAAAA
GATAGAATAAACTTTTGCTGTGCTAAAACAAAAAACGATCATGATATGAA
GCCGATTCATAGGAAAAATAAAAAAATAGGACTGTGTGGTGGAGAATCAA
TAACAATTCCTTTATAGCTTGTGTTGTATGTTAGCATTTTCTAACTTTTT
TCTCTTATTTCTTTCTTTTAAATCTGACTTTAGGAAGCCTTGGACAACTA
GGATTTGGAATTGCTAAAGAGCTTAGGTATCTATTTTACTGAAAATACAC
GCTTTTTTATATATAAGAATATACTTAAGAAAATATTTATGATGAAATTG
GCCAAAAAATCAAGAATATGATAAGAATACCACCATCATGGAATGGAATT
AAGCAACTGAACCTAAGAAAGCCATTTTTAAAGCCTTACCGTTTTCCCAG
CAATGCCAAATGCTTAAAGGTTCAACAAAAACGCCAAATTTTTGCTTGAG
GTATGTCCCGTAACTTTGTGTAATGCCGACATACCTTGTATAATTCCGTC
ATAGCATGTAACAGTCACCTCAAGGCAAGAACATGCTTTTTGGGGTTAAA
CTGTGTGGTGTAGCAAATAACAATCTCATGTATGATTCTAATCTCTTCTA
ATAATCTTTTACAACAGAAGAAAATATGGGGATGAAAATATTGTTATGTC
AGATGTTGTGAAAGCACCAAGTGACATCTCAAATAGTGGTATGCATAGTT
CTGTGATTTATTGTTAATCCATATATTAGTATTGATTAAATTTTCATACC
TCCTCCATTTTAAGACTTTTCAATCATAATCATAATTCTNTGAGTAGAAA
CAGCAAAATGCTTCAAGGAAGATCATGGTTTTTTTATAAATCATAATTCT
TTTTTTCAGGACCCTTTCTTTATGCTGATATCTTAGATTACAAAAACTTA
CAAAGTATTGTTGTTAACTACAACATAGACACTATTGTGCATCTCAGTGC
CTTACTAAGTGCAATTGGAGAACATAACGTATCAGAAGCCTTGAAAATCA
ACATTTATGGGTTTCATAACATCATCGAGTTATGTAGAAGATATGGCTTA
AAACTATTTTGTCCTAGTACTATTGGAGCTTTTGGACCTGACAGCCCAAG
GAATCCAACTCCTGACCTTACAATACAACGCCCAAGGACAATCTATGGAG
TTTCCAAAGTGCATATGGAATTAATGGGAGAGGTATTAATAAAATTTTTA
AAAGATTCAAAAAAATCTAAATCCAATAAATTAAAAAGTAATTGATTGAC
CTTGATTAAAAAACATTTTGATTTTTATTATAATTTATAATTTTCTTTTA
TTTACAGTATTATCATCACCGATATGGATTGGATTTTCGGTCATTAAGAT
ATCCAGGCGTTATTTCAGCATTCACTCAACCTGGAGGAGGAACGACAGGT
GAATATTTTACACTTTTAGAATGTACATTCTCTTTTAACATTCAACACTT
TGCTTTATACATTTCTAAGGATAAGCAGCTTTGAAATTGACATAAATTTA
TTTCGTATTTAGATTATGCTGTTGATATTTTTCACTGTGCATTAAAAACT
GGCAAATTTGAGTGCAACTTGACAGAGAATACACGTTTGCCAATGATGTA
TATCGATGATGTCATCAAAGCTACTGCTAATATGATTGATACACCTGAAG
AAGAACTTAAAATTAGGACTTACAATATTTGTGAGTATTTTTTATTTACT
AAAAAAATCATTCTTGACCAAGAAATTTTGTTATTTTGATGCTTGCCTTG
AAAAAAACGTTTGTGAGATATTTTAATTGATAAATTAAAGTTAACTTTGA
ATCTTTTGACNAGAAATTTTGTTATTTTGATGCTTGCCTTGAGAAAAACG
TTTGTGAGATATTTTAATTTGAATCTTTTGATTTGCTTTGAATAAATTTT
GTTATTTTTCTGTTTAAGCTGCAATGAGTTTTACACCAAAAGAGATCAGT
GAAGAAGTCAAAAAAATCATGCCTGAATTTGAAATTTCATATGATGTTGA
TTCAGTACGACAAAAAATTGGTAAGCCCTGTTTTAAGTTTAAAAATTCAT
TTATTTATCATTGATAAAAAAGCGATCAAAACAGTTGTAATAGTTAATCA
ATCAAAAAAGGTATTTCAATTATCCTAAATATTTCTCAATTGTTTAATAC
CATTTTGTTTTGTATTTAGCTGAAAGTTGGCCACAAGTTTTTGATGATCA
AAATGCACGAAAAGATTGGGGTTGGCAACATGATTTCGATCTGACAAAAA
TGTGCAAAGAAATGTTCAGACTTCTTGGTCCTGGTTATGGTAAAGATATT
TAATTCAATAAAAACGAAAATCATTATAATTTATATTTTCCAATTAAGTA
TTCATTATTCATTTATATTTTGAACTTTGTGTTCTAATTATGATAAATTA
TCTGTCGTCTTTCAAACCAACTAAAAAACAGGAACCTCTATGTATCCTAA
TTTACAAATACTCAAAAGTCATTAGTCTTTTTTTGACGGAAATATTTGGA
TAATACTTAAGGTGCAGCATACGTACAACATCAATTTCCTGCATATTTTT
TTAATAGCCTTTGAATTGAGTAAATTTTAGAAATTTTATAGTATTTATTA
TGTATGGATAATATGTTAAATATTTAATTTTCTTGCCCCATTTTATTTTT
AGTTATTCTAGTTGTGCACTTATTTTTCCTCAAGTTTTTTTATAATGTTC
TTAGTATTTATTCCAATGAATATCAAAATAGATAATTTTTCACATTAAAG
TTATTGGCATTCTTGCCAAACTATTTTCTCTATTAATACCTTTAGGTTAA
ATTACTAGTAAACACAGCTTGAGTGTTGTTCACGCGATTTCGGGCTCGCT
TGTTGTCTTGATCTTTT

Coding sequence (CDS) from alignment at sc0000162:347518..350734-

>TCONS_00013165 ID=TCONS_00013165|Name=TCONS_00013165|organism=Clytia hemisphaerica|type=CDS|length=8688bp|location=Sequence derived from alignment at sc0000162:347518..350734- (Clytia hemisphaerica)
CTGAAAGTTGGCCACAAGTTTTTGATGATCAAAATGCACGAAAAGATTGG
GGTTGGCAACATGATTTCGATCTGACAAAAATGTGCAAAGAAATGTTCAG
ACTTCTTGGTCCTGGTTATGGTAAAGATATTTAACTGCAATGAGTTTTAC
ACCAAAAGAGATCAGTGAAGAAGTCAAAAAAATCATGCCTGAATTTGAAA
TTTCATATGATGTTGATTCAGTACGACAAAAAATTGATTATGCTGTTGAT
ATTTTTCACTGTGCATTAAAAACTGGCAAATTTGAGTGCAACTTGACAGA
GAATACACGTTTGCCAATGATGTATATCGATGATGTCATCAAAGCTACTG
CTAATATGATTGATACACCTGAAGAAGAACTTAAAATTAGGACTTACAAT
ATTTTATTATCATCACCGATATGGATTGGATTTTCGGTCATTAAGATATC
CAGGCGTTATTTCAGCATTCACTCAACCTGGAGGAGGAACGACAGGACCC
TTTCTTTATGCTGATATCTTAGATTACAAAAACTTACAAAGTATTGTTGT
TAACTACAACATAGACACTATTGTGCATCTCAGTGCCTTACTAAGTGCAA
TTGGAGAACATAACGTATCAGAAGCCTTGAAAATCAACATTTATGGGTTT
CATAACATCATCGAGTTATGTAGAAGATATGGCTTAAAACTATTTTGTCC
TAGTACTATTGGAGCTTTTGGACCTGACAGCCCAAGGAATCCAACTCCTG
ACCTTACAATACAACGCCCAAGGACAATCTATGGAGTTTCCAAAGTGCAT
ATGGAATTAATGGGAGAGAAGAAAATATGGGGATGAAAATATTGTTATGT
CAGATGTTGTGAAAGCACCAAGTGACATCTCAAATAGTGGAAGCCTTGGA
CAACTAGGATTTGGAATTGCTAAAGAGCTTAGATGCGGAGTCTCATTTTT
GGAAACTGCTTAAACCAGTTAAAACAGGAGCAGCTTCGCAGATGTATTTA
TGGGTGTGCTAAAGGTGTTTCGATTGCACGTGAAAGGAGAAACTTTTCAA
CTTCAACCAAGAAGCAACAAAAAATTCTTATAACAGCTGAAAGTTGGCCA
CAAGTTTTTGATGATCAAAATGCACGAAAAGATTGGGGTTGGCAACATGA
TTTCGATCTGACAAAAATGTGCAAAGAAATGTTCAGACTTCTTGGTCCTG
GTTATGGTAAAGATATTTAACTGCAATGAGTTTTACACCAAAAGAGATCA
GTGAAGAAGTCAAAAAAATCATGCCTGAATTTGAAATTTCATATGATGTT
GATTCAGTACGACAAAAAATTGATTATGCTGTTGATATTTTTCACTGTGC
ATTAAAAACTGGCAAATTTGAGTGCAACTTGACAGAGAATACACGTTTGC
CAATGATGTATATCGATGATGTCATCAAAGCTACTGCTAATATGATTGAT
ACACCTGAAGAAGAACTTAAAATTAGGACTTACAATATTTTATTATCATC
ACCGATATGGATTGGATTTTCGGTCATTAAGATATCCAGGCGTTATTTCA
GCATTCACTCAACCTGGAGGAGGAACGACAGGACCCTTTCTTTATGCTGA
TATCTTAGATTACAAAAACTTACAAAGTATTGTTGTTAACTACAACATAG
ACACTATTGTGCATCTCAGTGCCTTACTAAGTGCAATTGGAGAACATAAC
GTATCAGAAGCCTTGAAAATCAACATTTATGGGTTTCATAACATCATCGA
GTTATGTAGAAGATATGGCTTAAAACTATTTTGTCCTAGTACTATTGGAG
CTTTTGGACCTGACAGCCCAAGGAATCCAACTCCTGACCTTACAATACAA
CGCCCAAGGACAATCTATGGAGTTTCCAAAGTGCATATGGAATTAATGGG
AGAGAAGAAAATATGGGGATGAAAATATTGTTATGTCAGATGTTGTGAAA
GCACCAAGTGACATCTCAAATAGTGGAAGCCTTGGACAACTAGGATTTGG
AATTGCTAAAGAGCTTAGATGCGGAGTCTCATTTTTGGAAACTGCTTAAA
CCAGTTAAAACAGGAGCAGCTTCGCAGATGTATTTATGGGTGTGCTAAAG
GTGTTTCGATTGCACGTGAAAGGAGAAACTTTTCAACTTCAACCAAGAAG
CAACAAAAAATTCTTATAACAGCTGAAAGTTGGCCACAAGTTTTTGATGA
TCAAAATGCACGAAAAGATTGGGGTTGGCAACATGATTTCGATCTGACAA
AAATGTGCAAAGAAATGTTCAGACTTCTTGGTCCTGGTTATGGTAAAGAT
ATTTAACTGCAATGAGTTTTACACCAAAAGAGATCAGTGAAGAAGTCAAA
AAAATCATGCCTGAATTTGAAATTTCATATGATGTTGATTCAGTACGACA
AAAAATTGATTATGCTGTTGATATTTTTCACTGTGCATTAAAAACTGGCA
AATTTGAGTGCAACTTGACAGAGAATACACGTTTGCCAATGATGTATATC
GATGATGTCATCAAAGCTACTGCTAATATGATTGATACACCTGAAGAAGA
ACTTAAAATTAGGACTTACAATATTTTATTATCATCACCGATATGGATTG
GATTTTCGGTCATTAAGATATCCAGGCGTTATTTCAGCATTCACTCAACC
TGGAGGAGGAACGACAGGACCCTTTCTTTATGCTGATATCTTAGATTACA
AAAACTTACAAAGTATTGTTGTTAACTACAACATAGACACTATTGTGCAT
CTCAGTGCCTTACTAAGTGCAATTGGAGAACATAACGTATCAGAAGCCTT
GAAAATCAACATTTATGGGTTTCATAACATCATCGAGTTATGTAGAAGAT
ATGGCTTAAAACTATTTTGTCCTAGTACTATTGGAGCTTTTGGACCTGAC
AGCCCAAGGAATCCAACTCCTGACCTTACAATACAACGCCCAAGGACAAT
CTATGGAGTTTCCAAAGTGCATATGGAATTAATGGGAGAGAAGAAAATAT
GGGGATGAAAATATTGTTATGTCAGATGTTGTGAAAGCACCAAGTGACAT
CTCAAATAGTGGAAGCCTTGGACAACTAGGATTTGGAATTGCTAAAGAGC
TTAGATGCGGAGTCTCATTTTTGGAAACTGCTTAAACCAGTTAAAACAGG
AGCAGCTTCGCAGATGTATTTATGGGTGTGCTAAAGGTGTTTCGATTGCA
CGTGAAAGGAGAAACTTTTCAACTTCAACCAAGAAGCAACAAAAAATTCT
TATAACAGCTGAAAGTTGGCCACAAGTTTTTGATGATCAAAATGCACGAA
AAGATTGGGGTTGGCAACATGATTTCGATCTGACAAAAATGTGCAAAGAA
ATGTTCAGACTTCTTGGTCCTGGTTATGGTAAAGATATTTAACTGCAATG
AGTTTTACACCAAAAGAGATCAGTGAAGAAGTCAAAAAAATCATGCCTGA
ATTTGAAATTTCATATGATGTTGATTCAGTACGACAAAAAATTGATTATG
CTGTTGATATTTTTCACTGTGCATTAAAAACTGGCAAATTTGAGTGCAAC
TTGACAGAGAATACACGTTTGCCAATGATGTATATCGATGATGTCATCAA
AGCTACTGCTAATATGATTGATACACCTGAAGAAGAACTTAAAATTAGGA
CTTACAATATTTTATTATCATCACCGATATGGATTGGATTTTCGGTCATT
AAGATATCCAGGCGTTATTTCAGCATTCACTCAACCTGGAGGAGGAACGA
CAGGACCCTTTCTTTATGCTGATATCTTAGATTACAAAAACTTACAAAGT
ATTGTTGTTAACTACAACATAGACACTATTGTGCATCTCAGTGCCTTACT
AAGTGCAATTGGAGAACATAACGTATCAGAAGCCTTGAAAATCAACATTT
ATGGGTTTCATAACATCATCGAGTTATGTAGAAGATATGGCTTAAAACTA
TTTTGTCCTAGTACTATTGGAGCTTTTGGACCTGACAGCCCAAGGAATCC
AACTCCTGACCTTACAATACAACGCCCAAGGACAATCTATGGAGTTTCCA
AAGTGCATATGGAATTAATGGGAGAGAAGAAAATATGGGGATGAAAATAT
TGTTATGTCAGATGTTGTGAAAGCACCAAGTGACATCTCAAATAGTGGAA
GCCTTGGACAACTAGGATTTGGAATTGCTAAAGAGCTTAGATGCGGAGTC
TCATTTTTGGAAACTGCTTAAACCAGTTAAAACAGGAGCAGCTTCGCAGA
TGTATTTATGGGTGTGCTAAAGGTGTTTCGATTGCACGTGAAAGGAGAAA
CTTTTCAACTTCAACCAAGAAGCAACAAAAAATTCTTATAACAGCTGAAA
GTTGGCCACAAGTTTTTGATGATCAAAATGCACGAAAAGATTGGGGTTGG
CAACATGATTTCGATCTGACAAAAATGTGCAAAGAAATGTTCAGACTTCT
TGGTCCTGGTTATGGTAAAGATATTTAACTGCAATGAGTTTTACACCAAA
AGAGATCAGTGAAGAAGTCAAAAAAATCATGCCTGAATTTGAAATTTCAT
ATGATGTTGATTCAGTACGACAAAAAATTGATTATGCTGTTGATATTTTT
CACTGTGCATTAAAAACTGGCAAATTTGAGTGCAACTTGACAGAGAATAC
ACGTTTGCCAATGATGTATATCGATGATGTCATCAAAGCTACTGCTAATA
TGATTGATACACCTGAAGAAGAACTTAAAATTAGGACTTACAATATTTTA
TTATCATCACCGATATGGATTGGATTTTCGGTCATTAAGATATCCAGGCG
TTATTTCAGCATTCACTCAACCTGGAGGAGGAACGACAGGACCCTTTCTT
TATGCTGATATCTTAGATTACAAAAACTTACAAAGTATTGTTGTTAACTA
CAACATAGACACTATTGTGCATCTCAGTGCCTTACTAAGTGCAATTGGAG
AACATAACGTATCAGAAGCCTTGAAAATCAACATTTATGGGTTTCATAAC
ATCATCGAGTTATGTAGAAGATATGGCTTAAAACTATTTTGTCCTAGTAC
TATTGGAGCTTTTGGACCTGACAGCCCAAGGAATCCAACTCCTGACCTTA
CAATACAACGCCCAAGGACAATCTATGGAGTTTCCAAAGTGCATATGGAA
TTAATGGGAGAGAAGAAAATATGGGGATGAAAATATTGTTATGTCAGATG
TTGTGAAAGCACCAAGTGACATCTCAAATAGTGGAAGCCTTGGACAACTA
GGATTTGGAATTGCTAAAGAGCTTAGATGCGGAGTCTCATTTTTGGAAAC
TGCTTAAACCAGTTAAAACAGGAGCAGCTTCGCAGATGTATTTATGGGTG
TGCTAAAGGTGTTTCGATTGCACGTGAAAGGAGAAACTTTTCAACTTCAA
CCAAGAAGCAACAAAAAATTCTTATAACAGCTGAAAGTTGGCCACAAGTT
TTTGATGATCAAAATGCACGAAAAGATTGGGGTTGGCAACATGATTTCGA
TCTGACAAAAATGTGCAAAGAAATGTTCAGACTTCTTGGTCCTGGTTATG
GTAAAGATATTTAACTGCAATGAGTTTTACACCAAAAGAGATCAGTGAAG
AAGTCAAAAAAATCATGCCTGAATTTGAAATTTCATATGATGTTGATTCA
GTACGACAAAAAATTGATTATGCTGTTGATATTTTTCACTGTGCATTAAA
AACTGGCAAATTTGAGTGCAACTTGACAGAGAATACACGTTTGCCAATGA
TGTATATCGATGATGTCATCAAAGCTACTGCTAATATGATTGATACACCT
GAAGAAGAACTTAAAATTAGGACTTACAATATTTTATTATCATCACCGAT
ATGGATTGGATTTTCGGTCATTAAGATATCCAGGCGTTATTTCAGCATTC
ACTCAACCTGGAGGAGGAACGACAGGACCCTTTCTTTATGCTGATATCTT
AGATTACAAAAACTTACAAAGTATTGTTGTTAACTACAACATAGACACTA
TTGTGCATCTCAGTGCCTTACTAAGTGCAATTGGAGAACATAACGTATCA
GAAGCCTTGAAAATCAACATTTATGGGTTTCATAACATCATCGAGTTATG
TAGAAGATATGGCTTAAAACTATTTTGTCCTAGTACTATTGGAGCTTTTG
GACCTGACAGCCCAAGGAATCCAACTCCTGACCTTACAATACAACGCCCA
AGGACAATCTATGGAGTTTCCAAAGTGCATATGGAATTAATGGGAGAGAA
GAAAATATGGGGATGAAAATATTGTTATGTCAGATGTTGTGAAAGCACCA
AGTGACATCTCAAATAGTGGAAGCCTTGGACAACTAGGATTTGGAATTGC
TAAAGAGCTTAGATGCGGAGTCTCATTTTTGGAAACTGCTTAAACCAGTT
AAAACAGGAGCAGCTTCGCAGATGTATTTATGGGTGTGCTAAAGGTGTTT
CGATTGCACGTGAAAGGAGAAACTTTTCAACTTCAACCAAGAAGCAACAA
AAAATTCTTATAACAGCTGAAAGTTGGCCACAAGTTTTTGATGATCAAAA
TGCACGAAAAGATTGGGGTTGGCAACATGATTTCGATCTGACAAAAATGT
GCAAAGAAATGTTCAGACTTCTTGGTCCTGGTTATGGTAAAGATATTTAA
CTGCAATGAGTTTTACACCAAAAGAGATCAGTGAAGAAGTCAAAAAAATC
ATGCCTGAATTTGAAATTTCATATGATGTTGATTCAGTACGACAAAAAAT
TGATTATGCTGTTGATATTTTTCACTGTGCATTAAAAACTGGCAAATTTG
AGTGCAACTTGACAGAGAATACACGTTTGCCAATGATGTATATCGATGAT
GTCATCAAAGCTACTGCTAATATGATTGATACACCTGAAGAAGAACTTAA
AATTAGGACTTACAATATTTTATTATCATCACCGATATGGATTGGATTTT
CGGTCATTAAGATATCCAGGCGTTATTTCAGCATTCACTCAACCTGGAGG
AGGAACGACAGGACCCTTTCTTTATGCTGATATCTTAGATTACAAAAACT
TACAAAGTATTGTTGTTAACTACAACATAGACACTATTGTGCATCTCAGT
GCCTTACTAAGTGCAATTGGAGAACATAACGTATCAGAAGCCTTGAAAAT
CAACATTTATGGGTTTCATAACATCATCGAGTTATGTAGAAGATATGGCT
TAAAACTATTTTGTCCTAGTACTATTGGAGCTTTTGGACCTGACAGCCCA
AGGAATCCAACTCCTGACCTTACAATACAACGCCCAAGGACAATCTATGG
AGTTTCCAAAGTGCATATGGAATTAATGGGAGAGAAGAAAATATGGGGAT
GAAAATATTGTTATGTCAGATGTTGTGAAAGCACCAAGTGACATCTCAAA
TAGTGGAAGCCTTGGACAACTAGGATTTGGAATTGCTAAAGAGCTTAGAT
GCGGAGTCTCATTTTTGGAAACTGCTTAAACCAGTTAAAACAGGAGCAGC
TTCGCAGATGTATTTATGGGTGTGCTAAAGGTGTTTCGATTGCACGTGAA
AGGAGAAACTTTTCAACTTCAACCAAGAAGCAACAAAAAATTCTTATAAC
AGCTGAAAGTTGGCCACAAGTTTTTGATGATCAAAATGCACGAAAAGATT
GGGGTTGGCAACATGATTTCGATCTGACAAAAATGTGCAAAGAAATGTTC
AGACTTCTTGGTCCTGGTTATGGTAAAGATATTTAACTGCAATGAGTTTT
ACACCAAAAGAGATCAGTGAAGAAGTCAAAAAAATCATGCCTGAATTTGA
AATTTCATATGATGTTGATTCAGTACGACAAAAAATTGATTATGCTGTTG
ATATTTTTCACTGTGCATTAAAAACTGGCAAATTTGAGTGCAACTTGACA
GAGAATACACGTTTGCCAATGATGTATATCGATGATGTCATCAAAGCTAC
TGCTAATATGATTGATACACCTGAAGAAGAACTTAAAATTAGGACTTACA
ATATTTTATTATCATCACCGATATGGATTGGATTTTCGGTCATTAAGATA
TCCAGGCGTTATTTCAGCATTCACTCAACCTGGAGGAGGAACGACAGGAC
CCTTTCTTTATGCTGATATCTTAGATTACAAAAACTTACAAAGTATTGTT
GTTAACTACAACATAGACACTATTGTGCATCTCAGTGCCTTACTAAGTGC
AATTGGAGAACATAACGTATCAGAAGCCTTGAAAATCAACATTTATGGGT
TTCATAACATCATCGAGTTATGTAGAAGATATGGCTTAAAACTATTTTGT
CCTAGTACTATTGGAGCTTTTGGACCTGACAGCCCAAGGAATCCAACTCC
TGACCTTACAATACAACGCCCAAGGACAATCTATGGAGTTTCCAAAGTGC
ATATGGAATTAATGGGAGAGAAGAAAATATGGGGATGAAAATATTGTTAT
GTCAGATGTTGTGAAAGCACCAAGTGACATCTCAAATAGTGGAAGCCTTG
GACAACTAGGATTTGGAATTGCTAAAGAGCTTAGATGCGGAGTCTCATTT
TTGGAAACTGCTTAAACCAGTTAAAACAGGAGCAGCTTCGCAGATGTATT
TATGGGTGTGCTAAAGGTGTTTCGATTGCACGTGAAAGGAGAAACTTTTC
AACTTCAACCAAGAAGCAACAAAAAATTCTTATAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007349XLOC_007349Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013165-exon-sc0000162-1575043694:350432..350734TCONS_00013165-exon-sc0000162-1575043694:350432..350734Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1575043694:350159..350201TCONS_00013165-exon-sc0000162-1575043694:350159..350201Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1575043694:349697..349767TCONS_00013165-exon-sc0000162-1575043694:349697..349767Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1575043694:349203..349525TCONS_00013165-exon-sc0000162-1575043694:349203..349525Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1575043694:348987..349077TCONS_00013165-exon-sc0000162-1575043694:348987..349077Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1575043694:348705..348872TCONS_00013165-exon-sc0000162-1575043694:348705..348872Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1575043694:348365..348466TCONS_00013165-exon-sc0000162-1575043694:348365..348466Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1575043694:347518..348215TCONS_00013165-exon-sc0000162-1575043694:347518..348215Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1510915933:350432..350734TCONS_00013165-exon-sc0000162-1510915933:350432..350734Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1510915933:350159..350201TCONS_00013165-exon-sc0000162-1510915933:350159..350201Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1510915933:349697..349767TCONS_00013165-exon-sc0000162-1510915933:349697..349767Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1510915933:349203..349525TCONS_00013165-exon-sc0000162-1510915933:349203..349525Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1510915933:348987..349077TCONS_00013165-exon-sc0000162-1510915933:348987..349077Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1510915933:348705..348872TCONS_00013165-exon-sc0000162-1510915933:348705..348872Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1510915933:348365..348466TCONS_00013165-exon-sc0000162-1510915933:348365..348466Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1510915933:347518..348215TCONS_00013165-exon-sc0000162-1510915933:347518..348215Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1491911889:350432..350734TCONS_00013165-exon-sc0000162-1491911889:350432..350734Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1491911889:350159..350201TCONS_00013165-exon-sc0000162-1491911889:350159..350201Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1491911889:349697..349767TCONS_00013165-exon-sc0000162-1491911889:349697..349767Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1491911889:349203..349525TCONS_00013165-exon-sc0000162-1491911889:349203..349525Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1491911889:348987..349077TCONS_00013165-exon-sc0000162-1491911889:348987..349077Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1491911889:348705..348872TCONS_00013165-exon-sc0000162-1491911889:348705..348872Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1491911889:348365..348466TCONS_00013165-exon-sc0000162-1491911889:348365..348466Clytia hemisphaericaexon
TCONS_00013165-exon-sc0000162-1491911889:347518..348215TCONS_00013165-exon-sc0000162-1491911889:347518..348215Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013165-proteinTCONS_00013165-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000162supercontigsc0000162:347518..350734 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.467	15.0353	8.96871	8.77448	33.3402	27.8914	90.0483	94.0241	31.269	50.9824	16.5703	11.8586	6.79659	6.41105	17.4467	6.6761	46.5659	53.5315	12.9033	20.7748	24.2486	21.5612	22.1043	23.0034	24.1242	22.3214	2.90658	1.59997	4.87885	5.62682
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0050662coenzyme binding
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050662 coenzyme binding
Blast
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BLAST of TCONS_00013165 vs. Swiss-Prot (Human)
Match: TDH (Inactive L-threonine 3-dehydrogenase, mitochondrial OS=Homo sapiens GN=TDH PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 9.196e-63
Identity = 99/172 (57.56%), Postives = 128/172 (74.42%), Query Frame = 3 
Query:  264 STSTKKQQKILITGSLGQLGFGIAKELRRKYGDENIVMSDVVKAPSDISNSGPFLYADILDYKNLQSIVVNYNIDTIVHLSALLSAIGEHNVSEALKINIYGFHNIIELCRRYGLKLFCPSTIGAFGPDSPRNPTPDLTIQRPRTIYGVSKVHMELMGEYYHHRYGLDFRSL 779
            S S     ++LITG+LGQLG G+A  LR+++G +++++SD+ K P  + +SGPF+Y+DILDYKNL+ IVVN  I  + H SALLSA GE NVS A  +NI G HNI+++   + L+LF PSTIGAFGP SPRNPTPDL IQRPRTIYGVSKVH ELMGE    R+ +  +S+
Sbjct:   45 SFSDTDHPRVLITGALGQLGVGLANLLRKRFGKDSVILSDIRKPPDHVFHSGPFIYSDILDYKNLREIVVNNRITWLFHYSALLSAFGEANVSLARAVNITGLHNILDVAAEHNLQLFVPSTIGAFGPTSPRNPTPDLCIQRPRTIYGVSKVHAELMGETMQSRFSMMPQSM 216
The following BLAST results are available for this feature:
BLAST of TCONS_00013165 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TDH9.196e-6357.56Inactive L-threonine 3-dehydrogenase, mitochondria... [more]
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