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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013135 ID=TCONS_00013135|Name=TCONS_00013135|organism=Clytia hemisphaerica|type=transcript|length=494bp
GGTACGCCCGGTTACGTAGCTCCAGAGGTTGAACGGGGATATAACCTTCT
TAGCTACGACCCATACGACGGCTTCAAAGCCGACATGTACAGCCTAGGCG
TGATTCTCTACAAATTATTGACAGGGAAATATCCACACAAAACCTGGATC
AAAGATTGTACTTTCTCTTCAGAATGCCGTGATCTATTGCAAAAGCTTCT
TAATGAAATCCCGAACTCACGCCCGACGATCGGCGAGGTATCGAACCATC
CTTTTCTCACTCCCAAGGTTGTTGCCAAAGATCAAAGGAAACAAAAACTT
GATAACATCGACAGGCCATTCAAAATGAAGAGCAAAAAACAAATATTCGT
CACACAAGACGTACGTAATAAGATGAACAACAACCATAATCTACGTACCG
TCTTCATTTCAAACAACGTGAcattcaaagatcaaatgaatgTAGTCGTA
AACGTTGATTCAAACGCAAAATTCCCCAACGGTCATCATTTCCC Run BLAST on NCBI protein sequence of TCONS_00013135-protein >TCONS_00013135-protein ID=TCONS_00013135-protein|Name=TCONS_00013135-protein|organism=Clytia hemisphaerica|type=polypeptide|length=164bp
GTPGYVAPEVERGYNLLSYDPYDGFKADMYSLGVILYKLLTGKYPHKTWI
KDCTFSSECRDLLQKLLNEIPNSRPTIGEVSNHPFLTPKVVAKDQRKQKL
DNIDRPFKMKSKKQIFVTQDVRNKMNNNHNLRTVFISNNVTFKDQMNVVV
NVDSNAKFPNGHHF Run BLAST on NCBI transcript from alignment at sc0000162:102058..102740- Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013135 ID=TCONS_00013135|Name=TCONS_00013135|organism=Clytia hemisphaerica|type=transcript|length=683bp|location=Sequence derived from alignment at sc0000162:102058..102740- (Clytia hemisphaerica)
GGTACGCCCGGTTACGTAGCTCCAGAGGTTGAACGGGGATATAACCTTCT
TAGCTACGACCCATACGACGGCTTCAAAGCCGACATGTACAGCCTGTAAG
TTGCTATTTCTACACTTCGTTTTGTAGAACTTTTAAATTAGTTTAGATTT
TTCTAATCTTGGAAAAATTCGCTACAACCTCATATTTAACTAAAACATAG
TTTGCAGAGGGGTATGAACCCCCCCAGGTTTATTTCACCCCCCCCTATAT
ACCCANCATAATTTCAATATCTTTTCACTTTCAGAGGCGTGATTCTCTAC
AAATTATTGACAGGGAAATATCCACACAAAACCTGGATCAAAGATTGTAC
TTTCTCTTCAGAATGCCGTGATCTATTGCAAAAGCTTCTTAATGAAATCC
CGAACTCACGCCCGACGATCGGCGAGGTATCGAACCATCCTTTTCTCACT
CCCAAGGTTGTTGCCAAAGATCAAAGGAAACAAAAACTTGATAACATCGA
CAGGCCATTCAAAATGAAGAGCAAAAAACAAATATTCGTCACACAAGACG
TACGTAATAAGATGAACAACAACCATAATCTACGTACCGTCTTCATTTCA
AACAACGTGACATTCAAAGATCAAATGAATGTAGTCGTAAACGTTGATTC
AAACGCAAAATTCCCCAACGGTCATCATTTCCC Coding sequence (CDS) from alignment at sc0000162:102058..102740- >TCONS_00013135 ID=TCONS_00013135|Name=TCONS_00013135|organism=Clytia hemisphaerica|type=CDS|length=984bp|location=Sequence derived from alignment at sc0000162:102058..102740- (Clytia hemisphaerica)
AGGCGTGATTCTCTACAAATTATTGACAGGGAAATATCCACACAAAACCT
GGATCAAAGATTGTACTTTCTCTTCAGAATGCCGTGATCTATTGCAAAAG
CTTCTTAATGAAATCCCGAACTCACGCCCGACGATCGGCGAGGTATCGAA
CCATCCTTTTCTCACTCCCAAGGTTGTTGCCAAAGATCAAAGGAAACAAA
AACTTGATAACATCGACAGGCCATTCAAAATGAAGAGCAAAAAACAAATA
TTCGTCACACAAGACGTACGTAATAAGATGAACAACAACCATAATCTACG
TACCGTCTTCATTTCAAACAACGTGACATTCAAAGATCAAATGAATGTAG
TCGTAAACGTTGATTCAAACGCAAAATTCCCCAACGGTCATCATTTCGGT
ACGCCCGGTTACGTAGCTCCAGAGGTTGAACGGGGATATAACCTTCTTAG
CTACGACCCATACGACGGCTTCAAAGCCGACATGTACAGCCTAGGCGTGA
TTCTCTACAAATTATTGACAGGGAAATATCCACACAAAACCTGGATCAAA
GATTGTACTTTCTCTTCAGAATGCCGTGATCTATTGCAAAAGCTTCTTAA
TGAAATCCCGAACTCACGCCCGACGATCGGCGAGGTATCGAACCATCCTT
TTCTCACTCCCAAGGTTGTTGCCAAAGATCAAAGGAAACAAAAACTTGAT
AACATCGACAGGCCATTCAAAATGAAGAGCAAAAAACAAATATTCGTCAC
ACAAGACGTACGTAATAAGATGAACAACAACCATAATCTACGTACCGTCT
TCATTTCAAACAACGTGACATTCAAAGATCAAATGAATGTAGTCGTAAAC
GTTGATTCAAACGCAAAATTCCCCAACGGTCATCATTTCGGTACGCCCGG
TTACGTAGCTCCAGAGGTTGAACGGGGATATAACCTTCTTAGCTACGACC
CATACGACGGCTTCAAAGCCGACATGTACAGCCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013135-exon-sc0000162-1575043694:102646..102740 | TCONS_00013135-exon-sc0000162-1575043694:102646..102740 | Clytia hemisphaerica | exon |
| TCONS_00013135-exon-sc0000162-1575043694:102058..102456 | TCONS_00013135-exon-sc0000162-1575043694:102058..102456 | Clytia hemisphaerica | exon |
| TCONS_00013135-exon-sc0000162-1510915933:102646..102740 | TCONS_00013135-exon-sc0000162-1510915933:102646..102740 | Clytia hemisphaerica | exon |
| TCONS_00013135-exon-sc0000162-1510915933:102058..102456 | TCONS_00013135-exon-sc0000162-1510915933:102058..102456 | Clytia hemisphaerica | exon |
| TCONS_00013135-exon-sc0000162-1491911889:102646..102740 | TCONS_00013135-exon-sc0000162-1491911889:102646..102740 | Clytia hemisphaerica | exon |
| TCONS_00013135-exon-sc0000162-1491911889:102058..102456 | TCONS_00013135-exon-sc0000162-1491911889:102058..102456 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000162 | supercontig | sc0000162:102058..102740 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004672 |
protein kinase activity |
Blast
The following BLAST results are available for this feature:
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