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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013086 ID=TCONS_00013086|Name=TCONS_00013086|organism=Clytia hemisphaerica|type=transcript|length=1609bp
TCCCAAGAAGACTAGCCTTTATAAAAGGTAAAAATTTGAAGTTACAAAAT
CCAATACAATTTGATAAATTATACATACAAAATATaaagtcattaaaaat
atttcaaatgtatCAAGAAATTTACTCGACTAAAAATGCTTagcatcaaa
ataataattatataaaatttaaacaaaaatatcCTGAAAAAGATTTATAC
TAAAGGACAATCATATTCCCAATAGTCCATAGTCCAAATTATACTTTCAA
ACTAAACTAAGCTTCTTTTGAAACTTGAGGAAGGGGTTTGACATTGTGTT
GACCTTCAAGTTTGGATCTCTTCAAATCCTCGTTGACGAAGAAGGTCAAA
ATGAAAGCCACCACATACATTCCAGTAACAATGCTACACATCAAAAACAC
ATATCCATCATCGACAAGCCTtccaaaaataagaatattgaTGAAACCGA
GAGTGTTGGTAATCATAAGCACAATAGCGGTCGACATCCCTTCCGTCACT
GGGTAAGAAACCTCAGTAGCAAAAGATAATCCAACAGCGTTAAAAGAGGT
ATTGAAGAAACACAAGAAAGAATACGTCACAAATAGTGACGTGGCTGTTT
TCCAATACAGTATAGTAGAACTAAATGCTATCCAGCAAAGAATTTGTACA
AAGAACAAGCGAGTGGTGATCTTCTTGTAACATTTGTATTTATCAGCTAT
GGAAGCCAATAACATTAAGCCAACGATGCTGACAAGGTTGCCCAAGAAAC
CTATCCAACCGATTTGCGAAGAGCTTACGATGGTGTTGGCCATCTCATTG
AGACAGGTAACAAACATACTATACAGACCAGATTGTAAACCATATACCAA
GGCTAGAAGCATGAAGTTTCTGTCAGTAAAAAGCAATTTCAAGGATAGTT
TGAAGCCAGGTGTCTCACCATGTTCATCAACGGTTGAACTATCGACAACA
GCTTTTGCATACGAGGGTGGCAATGGAGGTttttcatcgaaaaataaata
agcaaaTATCAAACACACTGCTAAGAGAGCAACATGCGAGATATTCATCC
TCAATAATCCATCATAAATTTCATCCATATTGTCACTATCTGGAACCATG
TAAGAGGGCTGTAAAAAACCAATAGCTTGTCCAATGAGATTGAATATGCC
TGATAAACCTATAGCTTTTGCATACTCTTGTTCAGAAAACCATACCATAG
ATAAGCGTGATGGTATTTGTGCTACTGCTCCAAccgaaaaagcagaaaaa
atctGACCCGTCATAACAAACGAAATCCCTTGCTGTGTTGTACCAGCTAG
ATGAAGACACACACAAACTCCATTTAAACTGGATCCAATTATCAAAAGTG
TTTTGATTCCAAAATTGTCCATGCAGTAAGCTGATGGAAGGGCAATCAAG
ACATAAACCAAGCTAAAAATATTTCCGGCCCAGTTAGTCAACTCAGGTGA
TATATGGTAATACTTGCAAACAATTTTGTTAATAGCAGTAATACATGTGA
ACAAAGTTGTGTTAGCCATCGAATTAATAGAGAATATTAACAATATGAGC
CATCGTTTCTTATAAACTTTAACAGTCGAAGGTGTCTGTATGTCATCATT
TGAATTAAT Run BLAST on NCBI transcript from alignment at sc0000162:204430..219552+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013086 ID=TCONS_00013086|Name=TCONS_00013086|organism=Clytia hemisphaerica|type=transcript|length=15123bp|location=Sequence derived from alignment at sc0000162:204430..219552+ (Clytia hemisphaerica)
TCCCAAGAAGACTAGCCTTTATAAAAGGTAAAAATTTGAAGTTACAAAAT
CCAATACAATTTGATAAATTATACATACAAAATATaaagtcattaaaaat
atttcaaatgtatCAAGAAATTTACTCGACTAAAAATGCTTagcatcaaa
ataataattatataaaatttaaacaaaaatatcCTGAAAAAGATTTATAC
TAAAGGACAATCATATTCCCAATAGTCCATAGTCCAAATTATACTTTCAA
ACTAAACTAAGCTTCTTTTGAAACTTGAGGAAGGGGTTTGACATTGTGTT
GACCTTCAAGTTTGGATCTCTTCAAATCCTCGTTGACGAAGAAGGTCAAA
ATGAAAGCCACCACATACATTCCAGTAACAATGCTACACATCAAAAACAC
ATATCCATCATCGACAAGCCTtccaaaaataagaatattgaTGAAACCGA
GAGTGTTGGTAATCATAAGCACAATAGCGGTCGACATCCCTTCCGTCACT
GGGTAAGAAACCTCAGTAGCAAAAGATAATCCAACAGCGTTAAAAGAGGT
ATTGAAGAAACACAAGAAAGAATACGTCACAAATAGTGACGTGGCTGTTT
TCCAATACAGTATAGTAGAACTAAATGCTATCCAGCAAAGAATTTGTACA
AAGAACAAGCGAGTGGTGATCTTCTTGTAACATTTGTATTTATCAGCTAT
GGAAGCCAATAACATTAAGCCAACGATGCTGACAAGGTTGCCCAAGAAAC
CTATCCAACCGATTTGCGAAGAGCTTACGATGGTGTTGGCCATCTCATTG
AGACAGGTAACAAACATACTATACAGACCAGATTGTAAACCATATACCAA
GGCTAGAAGCATGAAGTTTCTGTCAGTAAAAAGCAATTTCAAGGATAGTT
TGAAGCCAGGTGTCTCACCATGTTCATCAACGGTTGAACTATCGACAACA
GCTTTTGCATACGAGGGTGGCAATGGAGGTttttcatcgaaaaataaata
agcaaaTATCAAACACACTGCTAAGAGAGCAACATGTGAAATATTCATCT
TCAATAATCCATCGTAAATTTCATCCATATTGTCACTATCTGGAACCATG
TAAGAGGGCTGTAAAAAACCAATTGCTNATCGTAAATTTCATCCATATTT
TCACTATCTGGAACCATGTAAGAGGGCTGCAAAAAACCAATAGCCAATCC
AGACACATTGAATACAAAGGCTAAACTCAGTGCTTTTGCTTGTTCGTGCT
CTGGGAACCAAACTGTAGCAAGTCGAGCTGGAACCTGAAGAATGGCTCCC
ATTGAAAGACCGGCCATAAGTTGACCACTCAATACATACACTATACCATG
CTCTCTTGGTGTACCAGCCAGATGTAAACAAACACCAATGGCATTCAAGC
TTGAACCCAATATAACCAAGGTTCGCACACCAAAGGAATCCATGAAATAA
GCGGATGGCAGTGCTATGAAGACATAAACAATGTTGAAACCATTCCCTGC
CCAATCTGTCAGCGCTGGTGAAATATTGTAGTATCTGCAAGCAATATTAT
TAATGGATGTGATTGATACAAACAAAACAGCGTTTGCCAAAGAATTTATT
GCGAATATCAACAGTATGAGCCATCTTTTCTTGTAAACTTTCACTTTTAA
AGGTTTCTGATCATCTTCCGTTGTTGGTATCTTTTCGTagcttttcattt
tctttgtttctggaaagaaaaagaaaagtctcGAAAATTCACATCCATTG
AAATATACGGTACCGAACAGAGTAAAGATACTTAAAAGCATTTGAAGATT
ATCTTCCAAAGTATAAAGTCAATAACTTATCAATAATTCACATCTTAAAT
GTTAAGGAATaaagataatttcaaaaaatataatttttttataaaaatac
aatgatcAATAAACAATATTCTAATGCAATTAAAAAACAGTCgttaaatt
ttaagaaataatattgaaatcaaaacatacaaaaatcatcaaaattatct
ttcttttaaATATATAACAATCAAAAGTAAGAATTTTAATGTACAGATTT
CTACAGCGTCTTAGATTGAGCCATTCCATTTGATATCAATACAGGGGGTG
GGCgaacattttcatttcatttctcacTTTAatgtatgaaaataattttt
ccaagggcATTGTTGCAAACATTACCATTtcccagggggtatccacacat
tttcaatattttttttttacttaaaaggTTCGTagcacccccccccctcc
tttcaatggaacagcccattaaGCTTCATCTTAGTTGATAAACATTATCA
ATGTATCTAAATGTAAAACTAAATTATCAGTTAACAAGAATATCATTTCC
TTTATAATGAGGAGTCAGGAAAAAGAtcactttagaaaaaataaaaatga
tcaATTATTCTTTAGGCCTAAAGCTTTTTGGGGAATTGAAAGTTTTGTTC
ATTGGTCTGTTTCGAGAAGgataaaattctgaaaaaagatTGGTGTCATG
CTAAAGAATCACTAAAACAAGATAATAAATCGACACGATCAAGTATCTTT
AGAAATTGGATAATGTGAATCACTGTTGTGTTGCGATTCTTGGTCAGATC
TCTTTAAATTCTCCTTGACGAAGAAAGTCAAGATAAAGGCGACCACATAC
ATTCCAGTGACAATGCTACACATCAAAAACATATATCCATTATCAATCAA
TTTCCCAAACGCAAAAACACTTGAAGATCCAATCAAATTTCCAATTATTA
GTACAATGGCACTGGACATCCCTTCAGTCACAGGATACGTAAGCTCTGTA
GCATATGACAAACCAACAGCTATGAAAGGTACGTTGAAGAATGACACTAA
ACAGTAGGTGATAAAAAGTGTGGCTGTCGTTTTCCAATATAGAGTAGCAG
CACTGAATCCTACCCAACAAAGAATTTGTACAAAGAACAGAAAATGAGTT
ATCTTTTTATAAAATCTGTATTTATCGGCCAGAGCAGCAAATGATAAGAT
TCCCACAATACTGATGACATTACTGATGAATCCAAGCCAACCAATGTTTG
CTGAGCTTGTGATATTGCTGGACATTTCATTGAGGCAAGTCACAAACATA
TTATATAATCCAAACTGTATACCGTAAACAAACgccaaaatcataaaatc
tttGTCAGTGAAAAGCATTTTTAAGGAAAGTTTAAAGCCAGGTGTATCAA
CATGTTCATCTACGCTTGAACTATCGAGAACAGCTTTGGCATACGAGGGT
GGTAATGGaggtttttcatcaaaaaataaataagcagATATCAAACACAC
TGCTAAGAGAGCAACATGTGAAATATTCATCTTCAATAATCCATCATAAA
TTTCATCCATATTTTCACTATCTGGAACCATGTAAGATGACTGTAAAAAA
CCAATTGCCAATCCCAACACATTGAATCCAGTAGCCATGCTTACAGCTCT
AGCTTGTTCGTGTTCTGGGAACCATACTGAAGCAAGACGTGGGGGTACCT
GGAGGATTGCACCAACTGAAAAGCCAGCAATGAATTGACCAGTCAACACA
TACCATATGCCATTTTCTCTAGCTGTACCTGCTACATGTAAACAAACACA
GATGGCATTTAAGCTTGAGCCTATCAGTACCAAAGTCCTTACACCAAATG
AATCCATACAGTAAGCAGAAGGTAATGCAATCAACACAAACACAACAGCA
AAGCTATTCCCAGACCAATCTGTCAGCGATGGTGAAATATTGTAATATCT
GCAGATAATACTATTGATGGATGTGGTTGACACAAATAATAGAGCATTTG
CCAAAGAATTTATTGCAAATATGAACAGTATGATCCATCGTTTCTTGTAA
ACTTTCACTTTTAAAGGTTTCTGAATATTTTCACCAGAAGAtgtgattct
tttgttttcttccaTTATCTAAACAAAAGTGGGAATAATCAAATTAAGCT
TGGAATGTGTATTTTTAAAGGGTATGGGAATTTTTTGTATTCAAGAATGA
TTGGAATTagtcaaacataaaaaaaaaaaaaccctcaGCGTTGAATGACA
GAACCCAAGCAAAAGAGGGATTAATTCATTGATCTTCCTTAAGATTTGAA
GACACATATGTTATTAATATGTTTGAATTTACTTGTTCTTTGAAGAATTT
AATCTTTATTGCACTTACTTAGGGAAAAACTTTCAGAAATATTGGAAAGA
AATTTGTAGCTACTGATTTAAAATTACCACCGTGCTCGAATATTAAGATG
ATCAATTTAAAtccaaactcgtaaaaaaggaACAAAGGAAAAAGATTAGT
AGAGACAATTTAATATATATTGagaattcaatttgaaaaaatacaataca
aaaattttaataaaagtaaagaatccaagaaataattacaaaatataatt
taataaaatgttataaaatGCGTTATAAAATAAATTGAACGATATTGTGT
CGAATATTGCTAAAAATACGAATGTGTGAATGGACATACATTATTTGTTA
GGTGAAACTTCAGATGGATTGACTTTATAACTACGATCGGACCCCGTACA
AAGGTTTAAACTTTCTAATAAACAACACATGCTTAGGCATCCATTTTAAA
CTGGCATTGCTACAACAAAAAAGACTCTCTTTGAGTTTGATTGAACAGAA
TTATAAACAGAATCAATTTAAGTATTTTCAGCCCCAATGGTAACAGGATC
AGGTTGTTCTGATtcgatattcatttttttcaaatcttctttGATGAAAA
AACATAAGAGAAATCCAATAACATAAAATCCAGCAACAATTGCACACATC
AAAAATGCATGATTATTATCGATCAACTTGCCCAGTGTAATTATCATAAT
AAAACCAAAGGTATTTCCAAACACCAAACAAATAGCACTTGAAAGTCCTT
CTGATATTGGGTAAGTTAGTTCAGCGGAATAAGATAAGCCAATTGACAAG
AAGGGGACACCGAAAAGACACAGCACGATGTAAGACACAAACAATACTAA
TGTTGTTTTCCAATACAATATCACAGAACTAAATGCTATCCAGCAAAGAA
TCTGcataaaaaagaggaaaaacatCATTTTCTTGTAACATTTGTATTTG
TCAACAATAGAAGCAAAGCCAAGAATTCCAATTATACTTGCAATGTTGCC
TGAGAAGCCTAACCAGCCAATATTTTTAGAACTTGTTAAGTGATTTGTCA
TTTCATCAAGGCACGTGAGAAAGAGATTATATATACCAAATTGTACGCCA
TAAGCACAACAAAGtaacatgaaatttttgtttgtgAAAAGCATTTTCAA
GGATTCTTTGAAGCCAGGCGAACCAGCGTCTCCATTAATGCTTGAACTAT
CACGAACAGCTTTGGCATACGAGGGTGGCAATGGAGGTttttcatcgaaa
aataaataagctgaAATCAAACAAACTGCTTAGAGAGCAACATGTGAGAT
ATTCATTTTCAATAATCCATCATAAATTTCATTCATATTTTCACTANTGT
GAGATATTCACTTTCAATAATCCATCATAAATTTCATTCATATTTTCACT
ATCCGGAACCATAATGGAAGGCTGCAAAAAACCAATTGCCAATCCCAAAA
CATTAAATCCCAATGATACACTTGTAGCTTTTGCATACTCATGTTCTGGA
AACCACACCATTGATAATTGTGTTGGAATTTGAAGAGCTGCTGCTACTGA
AAAGCCAGCGGTAAGTTGAcccaccaaaacaaaccaaatccCTTGCTGTG
TTGTACCAGCTAGATGAAGACACACACAAACTCCATTTAAACTGGATCCA
ATTATCAAAAGTGTTTTGATTCCAAAGTTGTCCATACAGTAAGCTGATGG
GAGGGCAATCAGGATGTAAACTAAGTCAAAAATATTTCCGGCCCAGTCAG
TCAACTCAGGTGAGATATGGTAATACTTGCAAACAATTTTGTTAATAGCA
GTAATACATGTGAACAAAATTGCGTTGGCCATCGAATTTATAGAGAATAT
GAACAATATGAGCCATCGTTTTTTATAAACTTTAACAGTCAAAGGTGTCT
GTATGTCATTATTAGAGTCTGTAAATTGATTGTTCAGTGTCATTATTGTA
TCTAAAATCATTAAGGTGTTAAACTACATTAATACAGCAAGAAATCAGGT
GTTAAAATACTTCTTCAAAAGAGTTGCTTACCAAAAGCCTGTAAAAGAAC
AAGATTTCTGAAACTTAAAAGACTATAATGTCACCTATATAAAATCTAGT
TATGGTAAACTTGACACCCTCTTTCAAGAAATCCTTGCtaaataaaaatg
ttaaagTTGTATGGGATTTATACCCCCTTCTCGCAGACACACtaggaccc
cttcccactggaaaagttTATAGATCTTTGTCCCCAGTGGAGAATTGTAC
TCTAATTTTTATCCAGctgactgaaaaaatcctaccggatcTGTGAGAAA
GGGTGTATCAATATAGATTTTTAGTGAATTGTTTTTCAGAAAACTAAAAT
TCACAGTAGAcacaaaaaacacaaaatactcAAGTTAAAAATAATGGATT
CCATATATAGAGGGATGGAGTAAACGATAGGGGTCCAGaaccctctgcac
actatggttTTATCAGCCAGACATATAACAAACTTTGGTAAACTCTAACT
GGTCATTCAGAATGTTTGAAAGCTAGACCATAAAAAGCTATCTCATAACA
CGTCTAATTTTCAGGTAAAATAAAATTGCTTGGAATATCACAAGTTAGTT
ACGACAAATAATTTATTCTCTTAAGAAAAAACATCATTAtaaatacaaaa
tctttgtctGTTACTTTACAAAGATTATTGAAATCACAGGCCCAAAAAAT
GTGTAAATTGACTAATTGACACATTCAGCAGAAGCACCTTAGATTATAGT
GAAAGCAGAAAACTACGAGGTAATAAAAGCGATCATAGTGTTCTCTCATT
CACATTTGAATGTTATTTTGAAACTGAGGCTGTAGGTGTCAAATACAATT
ATAATAAAGCAAATTACGAAGATATGAAAGGagatcttgaaaattctgaa
tgGGTTACTGATTTCATTAGCAGGACAGACGACACACATGTTAATGAGTG
CTGGAATATGTTACGAGATAAACTTCTTGACCTTAGAAACCAATACGTAC
CATGCACAAAAGAAGAAaactcttataaaagaaagaaggAATTTGCGATT
TCTACAGAACTTTGAAAAACCATCAAAGAAAAGCGTCGTCTCCACCGAAA
ATGGATAaggtcgatagacctgggaaatatattactataaataaataaat
aaaaatgaaactccTAGATTAACTATTTTCCTTAGCATCCCCATAatatt
tattacattttttcCTTGAAAGTTAACTAAAGAGCACTGCATCTAAAGGT
GGTGCTTATTAGAATCACACAGAGACTTACTTGCAACAATATGACTTACT
CTTGATAGATCTCTCGTTGCCTTTTGAGAAAACTTAAGAATAGAGAGttc
taagtaaaaaaaaagctaTTGCAgtaaaatttgtgttttttactTGAACC
CAGAAGTCTTTTAGAATAGAGATTTAAAATTTGAGTTATGAGCATGAATC
TGGTAATGTCACCCAAATAGGCgaacaaatttggaaaaaataaagttttg
aatttcacttttattcctggataatctttttattaacgacttcaattttc
agaaaacataaatATCAGGGCTTAATCAAACTGGCTTGGTTCAGAAATAC
GACCTAGACTAGTTATAATcagacaaatttggcaaaaaactctttgtagt
tttcatttgatataaaataaaaaaattaaaaaataaaatgcatAAATCTA
ATCTTTGTCTTAGATTTCAGTCCATGGCTAATATATTAAGCTGCATCGAA
AAGCAATTTTTACAGTCCAGTatgacatatttttcaaattctgacacttt
ttccagaagaaaatctaaaatactaaaaaatattcccataaagtttgact
tcatgaaaagaaaactggctATGATCAGGTAACttcattctagatttgaa
ggactcattataagctttcaaaaaaaacaaaagtttgctatatttcagtt
gatcaataaaaaattagaaaacgaaaccttgttggttgcggacataactt
tttgtcaaatttactttaaaatcAGCAATAAACATTAAACTGAATAATTA
TTTGGCTTTTATTACTTTGTTGTCTTGAAAGGTCTTTGTAACTAtaattt
cctgaaaattgaagatttatcaGGATTTATCTGTAAAATAGAATCTAATc
atatatcattttttgttataatctaattttaaaagttaaattttgagctt
gacATTAACTGTTGTACACCTTCATAATTagtaaatatgatttttccttg
aaaagccactcaactttttcaatagaaaggATTAAATGGGTAATAATGCT
ATGTTGCagacataactttttttcttccagGGTAGAACCATAGAACATTT
ACatcatttattcaaaattttggagtgtctttttctgttgccaaaattta
aggaatatttgagactaaatcaatataaaaccaaaagatttggtctggtt
tgatttcagttattacatgtttttctttgaaaagaacaaaagaagactca
acaatgatattaaaactttctaatatttctaatagaagaacgaccctaga
ggacacaaaaaaattaaaaaagcaaGGAAATGCATGGTACTTACAAATGT
AACTCTTTGGTATTGTCAAGGTGTTAGCATAACTGCTTCAGAGGgttaaa
aatctgataaatactttaaataGTTATATCCGCAACATACAATTTGCTAC
AGAATATGACTCTGTTTTGAACTATTGGAGCAATTCTAACTAGTCTAAAA
GTGAATGTGTAGTAGATTATGTTGTGTGAACACTACACAATGAATTCAAT
ATGCAAATTAATGCATGATTTAGCCTTTATTCAAGCTCACAGGTTCAGaa
ccatcattttcaaagaaacaaaaagtttatttttctgctaaaattttcat
tctggACCTTAACTTGTCATCAGagtatttgttttctatttctaatagcC
TAAGAATTACttctatataataaaacatcatgCCAGCTTACAAATACACT
TTATCAGCAGCATTTTAGAcgaaatagttatgtccgcaacatgaaATACA
TATGAAAGAGGTAAATAAACTGGAAATCTTGCCAatggaccattcaaaaa
gtacgtacgctctgaGGCGGAGGGGGAGGGTACTACCAAAAGCGTACGAA
AGcgtacgagggggagggggaggtcAGGTAGAAAGGTACGTAcgctttga
catttttcaatacAACGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGCGAAAGGGGGGGGGTAATGCCAAAGC
GTACGagagcgtacaaggggggagggggtggtcaattttcaccgattttg
agcgtacgtactttttgaatggttcaGCTGAGTATGGATAAatccttgaa
aaatttaaaggatTAAATAATGTGCAGACATAATTCAAAAATGTGAATAG
AAACAAGACGCTGTTCActaaaattaattaataaataattttttgcgtTG
GCCAAGATAACTGGCGTTTTTTTTGCAACTTGCTCTAGTTTTAAAAATCC
CATTATCTAGGAAagatttaaaatgtaaaaaccaGTGAGCTAaagctttt
caatttttttctgtgtcaaatctgtgcggacataactttgtgaacggaaa
aagttatgtccgcaacatttttgattttatatgccaaaaaaacttttttt
ggcggTTCTCactgtgtttttcatttttcatatcctCTGGCTGCGAGAAC
AACAAAAACCAAGCTGGAAAAAGCATGATGTTGATGAATTATTATACAAT
GATAttgatcatttttttaaaaaccttatttccgttcacattttgaaaga
aagccCCCTCTAGGTAAATTTGAGTACCTGTTATAtcagaaacaagtgat
acttttatggacctacctggttatgcattttttaacaaatataattgata
tctacgtgagcatgaccgtcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNaatagtgacgatctattaaaattagttgtttgtttctta
taaaaaaaacgtttagaaaccaaaatttcatgctcttgaaatattctttc
attttcaagacttcgcgagcaaaaaaaaacatctttcatactaaaaaatt
gagtaatttggctaagaacattgatgtatgcttattaatagtgattctta
taaataaagatgcgttttttgagctgaaaaattctttttttacaaaaatc
tgcttgagccatcttttacctactttcatgtaaaaatcagaaaaaaacaa
tgatccaatgtttcacaaagtccaaaaaactcttttttagccgttttttg
gcccaaatttgcccaaaaacatttttttttcgaaaattgggctccgtcac
attttggccactaccattttgcacctttgtaccaaaaatcaaaagattcc
tatgattcaatcctgagaaaagttggtaacagacgaacggacgaacaaac
acaggttaatttataggacctccaccggggtaggtccaaaaatgactgtt
taagCTTGCCCATATCAAGATTGACCAGAAACAATAAGATTTGATATGAT
TTTACCAAAGCCTCAAAGTAGGAAAATTAATAAATCGAAAAGTGGGCTAC
ATTACCAGATTCATGCTCTTATTTATACACTTTAACATCTACACAGTagg
aaatgttgaaaattttatgatGGCATGATAAAAAGTTACATTGAACACTC
TATGTGTGCTACTTCATTTAATCAAACTATTGttataaataaattataaa
taaattataaagTAAGTCAAGTCATTGTTATAAAATGTCACAACACGATT
CATTCATGTATTTTCTGGAGTAAGAGGAACTCTTTCTTTCTGCAATTCAA
TATTTGATCTTTTCAGGTTTTCTTTGATGAAGAAACATAAGAGAAAACCA
GTGGTATAGAACCCAGTAACAATGGCACATGTCAAAAACAAATAGTTAGC
ATCAATCAATCTTCCCATGGTAATGATAACAAGAAACCCAAAACCATTTC
CAAACATCAAAGAAACACCACTTGAAAGTCCTTCTGATATTGGGTATGTC
AGCTCAGCAGAATAAGACATACCAATAGCCATAAAAGGGATGCTGAAAAT
ACAAAGTGTAGCATATGTAAGGAATAGTAACAATTTGACTTTCCAATACA
ATATCACAGAACTAAATGCTATCCAGCTTAGAATCTGCATAAAAAACAGG
AAAAACATCATTTTCTTGTAACATTTGTATTTGTCAACAATGGAAGCAAA
GACAATGACACCAATTATAGTTGCAGTGTTGCCTGTGAACCCTATCCAAC
CAATGTTTTTGGAGTTCGCAATGTGACTTGCCATTTGGTTCaaacaaatg
ataaaaaagttgaataaGCCTGCCTGTATACCAAAAGCAAgacaaaatat
catgaaatttttatcatgtaGAAGCATTCTTAAGGATTGTTTAAAGCAAG
GTGTGGCAACTCTTTCATCGATAGTAATGCTTGAACTATCGAGAACAGCT
TTTGCATAAGAGGGTGGTAATGGaggtttttcatcaaaaaacaaataaGC
TGAAATCAAACACACTGCTAAGAGAGCAACATGCGAGATATTCATCCTCA
ATAATCCATCATAAATTTCATCCATATTGTCACTATCTGGAACCATGTAA
GAGGGCTGTAAAAAACCAATAGCTTGTCCAATGAGATTGAAAATGCCTGA
TAAACCTATAGCTTTTGCATACTCTTGTTCAGAAAACCATACCATAGATA
AGCGTGATGGTATTTGTGCTACTGCTCCAACCGACAAAGCAGAAAAAATC
TGACCCGTCATAACAAACAAAATCCCTTGCTGTGTTGTACCAGCTAGATG
AAGACACACACAAACTCCATTTAAACTGGATCCAATTATTAAAAGTGTTT
TGATTCCAAAATTGTCCATGCAGTAAGCTGATGGGAGGGCAATCAAGACA
TAAACCAAGCTAAAAATATTTCCGGCCCAGTCAGTCAACTCAGGTGATAT
ATGGTAATACTTGCAAACAATTTTGTTAATAGCAGTAATACATGTGAACA
AAGTTGTGTTAGCCATCGAATTAATAGAGAATATTAACAATATGAGCCAT
CGTTTCTTATAAACTTTAACAGTCGAAGGTGTCTGTATGTCATCATTTGA
ATTAATAAGTTTTTCAGTGTCTGTCATTATGGtatctaaaaaaaattgta
tctaCTCAATGTTAGAAGAGTTATTAGTTGTATGAAAAACATGATTGGAT
GCATAACACAACCAGGGCGAAATCATACGATTCTAAGAAAAGTAGACGTC
AGTACTAAATTGATTCTAGTCTACTTTTCTTAAAATCGTTGTATGAAATA
AACCAGTTATGATCATGTGATATAGTCAGTGTGGAGAAAATTAACATCAT
TAAAAGATATGAAACGAACAGTATATTCTGTGGTATGATACATATCAAGT
TGCATTAAAATAAACTAGCCTGGTCAGATTGGAAATTTTGATAAGTACTA
CTACTAAAGANCATTTCCAAACATCAAAGAAACACCACTTGAAAGTCCTT
CTGATATTGGGTATGTCAGCTCAGCAGAATAAGACATACCAATAGCCATA
AAAGGGATGCTGAAAATACAAAGTGTAGCATATGTAAGGAATAGTAACAA
TTTGACTTTCCAATACAATATCACAGAACTAAATGCTATCCAGCTTAGAA
TCTGCATAAAAAACAGGAAAAACATCATTTTCTTGTAACATTTGTATTTG
TCAACAATGGAAGCAAAGACAATGACACCAATTATAGTTGCAGTGTTGCC
TGTGAACCCTATCCAACCAATGTCTTTGGAGTTCGCAATGTGACTTGCCA
TTTGGTTCaaacaaatgataaaaaagttgaataaGCCTGCCTGTATACCA
AAAGCAAgacaaaatatcatgaaatttttatcatgtaGAAGCATTCTTAA
GGATTGTTTAAAGCAAGGTGTGGCAACTCTTTCATCGATAGTAATGCTTG
AACTATCGAGAACAGCTTTTGCATAAGAGGGTGGTAATGGaggtttttca
tcaaaaaacaaataaGCTGAAATCAAACACACTGCTAAGAGAGCAACATG
CGAGATATTCATCCTCAATAATCCATCATAAATTTCATCCATATTGTCAC
TATCTGGAACCATGTAAGAGGGCTGTAAAAAACCAATAGCTTGTCCAATG
AGATTGAATATGCCTGATAAACCTATAGCTTTTGCATACTCTTGTTCAGA
AAACCATACCATAGATAAGCGTGATGGTATTTGTGCTACTGCTCCAAccg
aaaaagcagaaaaaatctGACCCGTCATAACAAACGAAATCCCTTGCTGT
GTTGTACCAGCTAGATGAAGACACACACAAACTCCATTTAAACTGGATCC
AATTATCAAAAGTGTTTTGATTCCAAAATTGTCCATGCAGTAAGCTGATG
GAAGGGCAATCAAGACATAAACCAAGCTAAAAATATTTCCGGCCCAGTTA
GTCAACTCAGGTGATATATGGTAATACTTGCAAACAATTTTGTTAATAGC
AGTAATACATGTGAACAAAGTTGTGTTAGCCATCGAATTAATAGAGAATA
TTAACAATATGAGCCATCGTTTCTTATAAACTTTAACAGTCGAAGGTGTC
TGTATGTCATCATTTGAATTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013086-exon-sc0000162-1491911889:204430..205462 | TCONS_00013086-exon-sc0000162-1491911889:204430..205462 | Clytia hemisphaerica | exon |
| TCONS_00013086-exon-sc0000162-1510915933:204430..205462 | TCONS_00013086-exon-sc0000162-1510915933:204430..205462 | Clytia hemisphaerica | exon |
| TCONS_00013086-exon-sc0000162-1575043694:204430..205462 | TCONS_00013086-exon-sc0000162-1575043694:204430..205462 | Clytia hemisphaerica | exon |
| TCONS_00013086-exon-sc0000162-1491911889:218977..219552 | TCONS_00013086-exon-sc0000162-1491911889:218977..219552 | Clytia hemisphaerica | exon |
| TCONS_00013086-exon-sc0000162-1510915933:218977..219552 | TCONS_00013086-exon-sc0000162-1510915933:218977..219552 | Clytia hemisphaerica | exon |
| TCONS_00013086-exon-sc0000162-1575043694:218977..219552 | TCONS_00013086-exon-sc0000162-1575043694:218977..219552 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000162 | supercontig | sc0000162:204430..219552 + |
Blast
BLAST of TCONS_00013086 vs. Swiss-Prot (Human)
Match: FLVC2 (Feline leukemia virus subgroup C receptor-related protein 2 OS=Homo sapiens GN=FLVCR2 PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.608e-47 Identity = 123/432 (28.47%), Postives = 221/432 (51.16%), Query Frame = -1
Query: 311 STVKVYKKRWLILLIFSINSMANTTLFTCITAINKIVCKYYHISPELTNWAGNIFSLVYVLIALPSAYCMDNFGIKTLLIIGSSLNGVCVCLHLAGTTQQGISFVMTGQIFSAFSVGAVAQIPSRLSMVWFSEQEYAKAIGLSGIFNLIGQAIGFLQPSYMVPDSDNMDEI--YDGLLRMNISHVALLAVCLIFAYLFFDEKPPLPPSYAKAVVDSSTVDEHGETPGFKLSLKLLFTDRNFMLLALVYGLQSGLYSMFVTCLNEMANTIVSSSQI--GWIGFLGNLVSIVGLMLLASIADKYKCYKKITTRLFFVQILCWIAFSSTILYWKTATSLFVTYSFLCFFNTSFNAVGLSFATEVSYPVTEGMSTAIVLMITNTLGFINILIFGRLVDD-----GYVFLMCSIVTGMYVVAFILTFFVNEDLKRSK 1579
S +KV ++RW ++L+FS SM N+ + +IN I +Y +S +W + L Y+ + LP A+ ++ FG++T+ + GS+LN + + L + GQ+ + + + +PSR++ VWF E + A ++ N +G AIGFL P +VP+ ++ DE+ + ++ I VA L LI + F EKP PPS A+++ + T + + S+ LF + NF+LL + YGL +G + T LN M ++ G IG + ++G ++ D+ K YK+ T ++ + ++ + ++ T L +F+T + FF T + +G FA E++YP +EG+S+ ++ + G I + G+++D+ G +FL C +T + LT F+ DL+R K
Sbjct: 76 SVIKVSRRRWAVVLVFSCYSMCNSFQWIQYGSINNIFMHFYGVSAFAIDWLSMCYMLTYIPLLLPVAWLLEKFGLRTIALTGSALNCLGAWVKLGSLKPHLFPVTVVGQLICSVAQVFILGMPSRIASVWFGANEVSTACSVAVFGNQLGIAIGFLVPPVLVPNIEDRDELAYHISIMFYIIGGVATL--LLILVIIVFKEKPKYPPSRAQSLSYALTSPDA----SYLGSIARLFKNLNFVLLVITYGLNAGAFYALSTLLNRMVIWHYPGEEVNAGRIGLTIVIAGMLGAVISGIWLDRSKTYKETTLVVYIMTLVGMVVYTFT-LNLGHLWVVFITAGTMGFFMTGYLPLGFEFAVELTYPESEGISSGLLNISAQVFGIIFTISQGQIIDNYGTKPGNIFL-CVFLT----LGAALTAFIKADLRRQK 495
The following BLAST results are available for this feature:
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