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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013056 ID=TCONS_00013056|Name=TCONS_00013056|organism=Clytia hemisphaerica|type=transcript|length=1741bp
gacttgaatcatgatacattacttacatttcactggatgcattttcgctg
tgaaattatccgcaaaattttctgaccgcgttctgagacggaggctaatt
ctTCCTTTATCTTGATTACAAAACACTTGACACAACaatacacgttcttt
tttacacatccaaatattttgaagcttttagagttttaagccttagaatg
ttcatattttcgccattttacgAGTATTTTAGCACATTTTCGACGTAATA
GCGCTAAAGTTTCCTAGTGCCTAGTCCTCTCCTAGATTTTGCCTATTTTA
AGAGACTCCCTACACTCTCTGTCATAAACCCAGTGTGACTCCTACCAACC
AGAAAATTTAGTCAAAATTTCATCGCCGGTTGGAAAAATACCTAGAATTT
CagctccactgggaaattgactttggttTCATTTCCATTCGAGATTCAAT
GGATGGAAAgaattgcactctaaaaccatcaCCACTGGATTGTATGAGTT
GTttgagcttggaacaatagaatttctatccccattgggatttcgataga
agtTTTTATCCCTGCCCTGGGAAAGATATCCAAGGGGACAGACATTGGTG
TTTTCCTAGATTTCCAAAGAAACTTGACTTACCTCCTCCCTGGATATTAA
GTAAATAAATTAGGGCTATGGAGGTAGTGAAACAGAAAATAGGACTGAGT
CTGGCTACTTAGCTAAAGCGATAATGAggttatataaaaataaaacttca
aattatGGACTGAATGTTGCCTTGTCGGTGTTATACGACCGAGAAGTGGA
GAATATGATTGGATAAAATATAATGATTGAGATTTAGTGATAAGACTAAA
AAATAGGGGACCAAAGTCCTAAAAATCGATCCTGAACTTTAAATTCAAGC
GCAGAAGAGTCCAACTGTAGCCCTGCCGCACTAATTGAAAGAGATTCAAT
CCTGTAGTCATTGGAGATGAAGGACCAAGTAAATGCCAATGGTTTCTCTG
TCGTTTTTTTAAGCTGGGTActtgatttgttttttattttgattgtgGTG
ATGTGTTGTAATTTTATTCCCGAATTTCACACTAGACTTGTACATGCATT
TGGATCTTTTCCCCAGGAGAAAAATTCCCAACAAGGCTGTGACGTAAGGA
TTCCCCAGGAGAAAGATTCCCATGACGTAAGGCTGTGACGTAAGAGTAAA
GCGGATATGAATCTACTTTCCCaatgtggaaattttttttgaacacTTGA
tttattttgtcattttatcttaGATCATTTGACCACAGATTCTTTTCTCA
GAGTAAAGAAAAGATAGAATGAATACAGtctaaaaataaagatgaaagtt
ttttgttacaaattgctctttttttggaaaaattaaatgaTCAGGACAAG
GACAGCTCCCCCCAAACGAAAAATAAACTCTTTATTTTGCTTTATAATGC
TTTAtgttaaaagaaattttattattatcaaaatctgttgttttaaaaaa
agactgaaaatattttttcatagttTATAAAAACTTCTAAAACTTTGTAT
ATATTCTAgtgtttttataaataaaactttttttttgaatctttACCTCA
AAAGGGGggtttaaattttattttctatttgatTTCAACCATAAAGACAT
ATATCAAGAGGGAATAATGTTTgtaaaatttcatgattttttcatagttt
tactaTCAAGAAGTTCCtactttttctaagaaatctcGACA Run BLAST on NCBI transcript from alignment at sc0000161:453255..454995 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013056 ID=TCONS_00013056|Name=TCONS_00013056|organism=Clytia hemisphaerica|type=transcript|length=1741bp|location=Sequence derived from alignment at sc0000161:453255..454995 (Clytia hemisphaerica)
TGTCgagatttcttagaaaaagtaGGAACTTCTTGAtagtaaaactatga
aaaaatcatgaaattttacAAACATTATTCCCTCTTGATATATGTCTTTA
TGGTTGAAatcaaatagaaaataaaatttaaaccCCCCTTTTGAGGTaaa
gattcaaaaaaaaagttttatttataaaaacacTAGAATATATACAAAGT
TTTAGAAGTTTTTATAaactatgaaaaaatattttcagtctttttttaaa
acaacagattttgataataataaaatttcttttaacaTAAAGCATTATAA
AGCAAAATAAAGAGTTTATTTTTCGTTTGGGGGGAGCTGTCCTTGTCCTG
Atcatttaatttttccaaaaaaagagcaatttgtaacaaaaaactttcat
ctttatttttagaCTGTATTCATTCTATCTTTTCTTTACTCTGAGAAAAG
AATCTGTGGTCAAATGATCtaagataaaatgacaaaataaaTCAAgtgtt
caaaaaaaatttccacattGGGAAAGTAGATTCATATCCGCTTTACTCTT
ACGTCACAGCCTTACGTCATGGGAATCTTTCTCCTGGGGAATCCTTACGT
CACAGCCTTGTTGGGAATTTTTCTCCTGGGGAAAAGATCCAAATGCATGT
ACAAGTCTAGTGTGAAATTCGGGAATAAAATTACAACACATCACcacaat
caaaataaaaaacaaatcaagTACCCAGCTTAAAAAAACGACAGAGAAAC
CATTGGCATTTACTTGGTCCTTCATCTCCAATGACTACAGGATTGAATCT
CTTTCAATTAGTGCGGCAGGGCTACAGTTGGACTCTTCTGCGCTTGAATT
TAAAGTTCAGGATCGATTTTTAGGACTTTGGTCCCCTATTTTTTAGTCTT
ATCACTAAATCTCAATCATTATATTTTATCCAATCATATTCTCCACTTCT
CGGTCGTATAACACCGACAAGGCAACATTCAGTCCataatttgaagtttt
atttttatataaccTCATTATCGCTTTAGCTAAGTAGCCAGACTCAGTCC
TATTTTCTGTTTCACTACCTCCATAGCCCTAATTTATTTACTTAATATCC
AGGGAGGAGGTAAGTCAAGTTTCTTTGGAAATCTAGGAAAACACCAATGT
CTGTCCCCTTGGATATCTTTCCCAGGGCAGGGATAAAAacttctatcgaa
atcccaatggggatagaaattctattgttccaagctcaaACAACTCATAC
AATCCAGTGGtgatggttttagagtgcaattcTTTCCATCCATTGAATCT
CGAATGGAAATGAaaccaaagtcaatttcccagtggagctGAAATTCTAG
GTATTTTTCCAACCGGCGATGAAATTTTGACTAAATTTTCTGGTTGGTAG
GAGTCACACTGGGTTTATGACAGAGAGTGTAGGGAGTCTCTTAAAATAGG
CAAAATCTAGGAGAGGACTAGGCACTAGGAAACTTTAGCGCTATTACGTC
GAAAATGTGCTAAAATACTcgtaaaatggcgaaaatatgaacattctaag
gcttaaaactctaaaagcttcaaaatatttggatgtgtaaaaaagaacgt
gtattGTTGTGTCAAGTGTTTTGTAATCAAGATAAAGGAagaattagcct
ccgtctcagaacgcggtcagaaaattttgcggataatttcacagcgaaaa
tgcatccagtgaaatgtaagtaatgtatcatgattcaagtc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013056-exon-sc0000161-1491911889:453255..454995 | TCONS_00013056-exon-sc0000161-1491911889:453255..454995 | Clytia hemisphaerica | exon |
| TCONS_00013056-exon-sc0000161-1510915933:453255..454995 | TCONS_00013056-exon-sc0000161-1510915933:453255..454995 | Clytia hemisphaerica | exon |
| TCONS_00013056-exon-sc0000161-1575043694:453255..454995 | TCONS_00013056-exon-sc0000161-1575043694:453255..454995 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000161 | supercontig | sc0000161:453255..454995 . |
Blast
The following BLAST results are available for this feature:
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