TCONS_00013001 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013001
Unique NameTCONS_00013001
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1345

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013001 ID=TCONS_00013001|Name=TCONS_00013001|organism=Clytia hemisphaerica|type=transcript|length=1345bp
TTGTTGTTGAGTGAGTTTTGTTCTTAATCATATCATTATATCTTCGTAGA
CTTCGTAGGATATtcaaaaaaaacgtaaacaacTATATACAAGATGGGTA
ATTGTTTGTTTTCTTTGGGTTCATGGTTGATAGACACATTAGGTTTTGGA
GTCAAACGAAGCAAAGTTCCCACAGATGACGAAGATGATGATCATATCGA
TCGAGATGAGATTGTTATCACCAAAATTGAAGAAATGGAAGCATACTGCA
AACCATTAATTTTCTTGCGATTCTGCGGGCAGACAAGTAGTGCAACTGAC
ACGGATACTAATGCAGAAAAAGGCCCTCAAAATACCGGATCCTACCTCCA
AATGTTGGATGCTTTGATTCGAACCCTCCCTAAAGATGAACTTAAAGAAG
GATTCTGTCAAACCAAAGCTTTCCAAGGTTTATTATGGAAGATTGCTGAT
CGAAGACATCGAGATGAAGAATCTGAGCAGAGATGTTATAGGAGATTGCT
AAGAGATTCCAAACGATTTGAAAAAGTCTTCCTTGAACGTGCAGccAAGA
AAGCAGAAAATCAAGAAGAGCCTTATTCAGAAGAACTACACGAACAACAT
GCTGAATACTGGGGCACGCGGCAACAATTATTGGCTGGTAAAGTCATCTG
TGATTGGCTCTCAGAGGACGATCAACCATCTATGGACCCTATCTACGGCG
TCTTATTAAATCCAACTGCCGGCCGCGTTGGGCCAGGTGATTCTGGTTTT
GTCCATAGTTTATTATACGATAATTCCGGTGAATGGGCTCATCATTCGGC
TGTTCACGATGCTTTTGgttatttgtttacatttcatCAACTTGGGCCGG
GGTACAATTATATGTATCGATCGTTTTTCGACGCAGATAATCCATTGGCT
GGACAAATTTCTGGtattgatttttggaaaaaatatgtgGCTGAAGTTGA
AACCAAACTTAAAGTCATTGAAAATTTCCGctcagtttgaaaaaacaaaa
ttttgtagaTAGACTTTCTTTGTATcattatttgttaaaaaaacataatt
gaatttgtgtaaatataaACGCAGAATTGTCAAACGTATTGAGcacttgc
aatttttttggagtttaagttttgtaaaaactaatatTTTACTATGTCTT
AGTTTCAAGTAAgttaacattttaaaagttgaaataaactttttgtcaaa
acctttaatttaaatatttttggtgcaCTATGTCTCAGATGAGCACTTTG
ATATGCTAGTGCAgtacaaaattttatttaacGGTGACTCAGCAAAATAT
ATTGATCTTAAGCCTAAACTATTTTGCGATCTATACATCCAAACC
Run BLAST on NCBI

protein sequence of TCONS_00013001-protein

>TCONS_00013001-protein ID=TCONS_00013001-protein|Name=TCONS_00013001-protein|organism=Clytia hemisphaerica|type=polypeptide|length=298bp
MGNCLFSLGSWLIDTLGFGVKRSKVPTDDEDDDHIDRDEIVITKIEEMEA
YCKPLIFLRFCGQTSSATDTDTNAEKGPQNTGSYLQMLDALIRTLPKDEL
KEGFCQTKAFQGLLWKIADRRHRDEESEQRCYRRLLRDSKRFEKVFLERA
AKKAENQEEPYSEELHEQHAEYWGTRQQLLAGKVICDWLSEDDQPSMDPI
YGVLLNPTAGRVGPGDSGFVHSLLYDNSGEWAHHSAVHDAFGYLFTFHQL
GPGYNYMYRSFFDADNPLAGQISGIDFWKKYVAEVETKLKVIENFRSV
Run BLAST on NCBI

transcript from alignment at sc0000161:114599..123726-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013001 ID=TCONS_00013001|Name=TCONS_00013001|organism=Clytia hemisphaerica|type=transcript|length=9128bp|location=Sequence derived from alignment at sc0000161:114599..123726- (Clytia hemisphaerica)
TTGTTGTTGAGTGAGTTTTGTTCTTAATCATATCATTATATCTTCGTAGA CTTCGTAGGATATTCAAAAAAAACGTAAACAACTATATACAAGATGGGTA ATTGTTTGTTTTCTTTGGGTTCATGGTTGATAGACACATTAGGTTTTGGA GTCAAACGAAGCAAAGTTCCCACAGATGACGAAGATGATGATCATATCGA TCGAGATGAGATTGTTATCACCAAAATTGAAGAAATGGAAGCATACTGCA AACCATTAATTTTCTTGCGATTCTGCGGGCAGACAAGTAGTGCAACTGTA AGTACTGATTGATGATAACAAACTTGAACCCAGTCCCTTATTTCGTTCGT TTTTTAGATTGTAGCACTTCCATCAGTATAATCTAAAAGTTGTGGCTCTG AGTACGAGATTGTGATCTTTATACTCTGGATGTAATCACCCCTCACCCCG TTTTTTTTGTATACCTATATCTTAGTTCCAATGACCCCCGATGATCCCTC TCAATTTCTTACATCCCTGTCTCAGTTTTTTGGTGTAATCTTATTAGCTT TCTCCTATTTTTGTACCCCTATCCCAGGTTCCTATTCATTTTCAATTCTT TTTGAAAATTAAATATTATTGTTCTTACAATCTAGGACACGGATACTAAT GCAGAAAAAGGCCCTCAAAATACCGGATCCTACCTCCAAATGTTGGATGC TTTGATTCGAACCCTCCCTAAAGATGAACTTAAAGAAGGATTCTGTCAAA CCAAAGCTTTCCAAGGTTTATTATGGAAGATTGCTGATCGAAGACATCGA GATGAAGAATCTGAGCAGAGATGTTATAGGAGATTGCTAAGAGATTCCAA ACGATTTGAAAAAGTCTTCCTTGAACGTGCAGGTATGAAATCAAATCAGT AGCGTGATGGCATGCCAGGGGGGAGGGGTACCCCTTTGCTTTTTTAAACC TTAAAATTAGCAGTTTCAGTCAAAAAGAGAAAAAAAAACAAAAATTGTCG TTTCGTCTAAAGATTTAACTTTGCAAAGGGGAGCAAAAAAACAAAAACGA AAATTTCCTCTCCAGATTTGGTCGACCCATAAGGAACACTATGATCAAAT GTCCCATTTCGGACAATGATATTGATGCATTCTACCCAATCAACGGATTA GAATAGGTGGATTAAGAACTCATAGAAAACACTCCTCGTTAGGTTATCAA ACTTTTTTACGAGTTTGCTAGCAATTAAAACTTGATAAGTTGTANNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNAGAGAACCCAATTTCCGTAATTCCGTCTAAATTTTCGCCAAATT CCGCCACTCCGTCCGAAAAAAGGGCCGATTCCGCTCCTCCGCCAACCATG AAACCCCCCCAAAAAACAATTCCCATTTCCATCTTACACCTCCTAAATGT TAAGAACCGTACCCAACCCAGGTTTTTAAATCTGATCGAAATTCGTTATC AATTTTTTATATTTAGCCAAGAAAGCAGAAAATCAAGAAGAGCCTTATTC AGAAGAACTACACGAACAACATGCTGAATACTGGGGCACGCGGCAACAAT TATTGGCTGGTAAAGTCATCTGTGATTGGCTCTCAGAGGACGATCAACCA TCTATGGACCCTATCTACGGCGTCTTATTAAATCCAACTGCCGGCCGCGT TGGGCCAGGTGATTCTGGTTTTGTCCATAGTTTATTATACGATAATTCCG GTGAATGGGCTCATCATTCGGCTGTTCACGATGCTTTTGGTTATTTGTTT ACATTTCATCAACTTGGGCCGGGGTACAATTATATGTATCGATCGTTTTT CGACGCAGATAATCCATTGGCTGGACAAATCTCTGGTATTGATTTTTGGA AAAAATATGTGGCTGAAGTTGAAACCAAACTTAAAGTCATTGAAAATTTC CGCTCAGTTTGAAAAAACAAAATTTTGTAGATAGACTTTCTTTGTATCAT TATTTGTTAAAAAAACATAATTGAATTTGTGTAAATATAAACGCAGAATT GTCAAACGTATTGAGCACTTGCAATTTTTTTGGAGTTTAAGTTTTGTAAA AACTAATATTTTACTATGTCTTAGTTTCAAGTAAGTTAACATTTTAAAAG TTGAAATAAACTTTTTGTCAAAACCTTTAATTTAAATATTTTTGGTGCAC TATGTCTCAGATGAGCACTTTGATATGCTAGTGCAGTACAAAATNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCGCAGAGTCATTTACAGATT TTTCTTGTAACAATGAGAAGACAATGGATCTCTCTTGGGAGCAACGAGAG AAGTTAATCCACCTATTCTAATCCGTTGACCCAATATACTTTGAAATTGA GATCTGCAATTCAGTTTCGAGAAGAATGAATTTGAAAAACGAGTCAAAAC ACTCATCGTTATTGACACATGAATTCTACTAAATAATGAAACTTGAAACT TTCTTTTGGGCTCTTAATAATAAGAGGGTACGCAGTAAGGCATCAATTAT TTGAAAGATGACTGCTAGACCATGACGTTTAACCATTTATTCAGACAGAA AAACCCTTTCACCCTTTCATTTTACGGGCTGAAGAGATGCTGCAGTGAAT AAATTTTGATAAATTATGTCCCGATTGATTCCGAGAGCAGCTCATACTGT ATTAACGCTTGAAAACTGAAGGGGATTCGATCATTATGGTAATGGTTTTA CCTTTTATAAAAACACCAAATTAAAAAACAAGTTTACAGCTTTGGATAAT ACAGATTATATTCTAAATAGTTTTATGCAACGTGGAGCCATCATGCGGTT AAATTCGTACAGACAGAATAAACTTTGGACGATAATTGTTGTTCATCTTT TTATGCACGTAGAAGGGAAATAGATTTAATCAATCATAAAAATACCGCTT AATTGATTCATAGTGCATTATAAAAACACTGGTCTGGAAGGCTTTTTATT GTTAAAAGATCGAGCTTACGTACCAAACCGATTTATTTTGCAAACTTTTT GATCATGTGATTTGAGAAAATAGACCAATCCTGTAAATCGCAACTTGTCT TTTGTTTGTAACAAAAGATAATTGAACAAAAAGCCAAAACAATACATTGC CAGACAGGTTATTTATAATGACTATGATTGATTACACGCTTTCTTTTTTT AATAAGAGAGCTGGTTTTTTTCATTTCATGATGGATATTCTTAACTTTTT GGGGAAAAATTATCCTAAAATATTCTTAAGGTGCACTTTATTTCAAAGAA CAATTTTATAAGAACAATGAGGCTCAAAATCCACAATTTACAATAGACGA TATCGGCTTTCTAAATTCTCCCCGAATGATTACCCATGATGCATTGTTAG GGTTTGGGTTATCGTCCGTGAATTTTTTTGCGCAATGCATCATGGGTAAT CATTCGGGGAGAATTCGGTAAAGTCGATATCGTCTATTCTTAGGAAAAAT GCTGTAAGAGTCGGCATTCTTAGGTTCAGTTGCCGAATTTAATGATGGTG ATAATCTTAGCATATTTCTAATTTTTGGGCTAATTTCATCATGAATATTC TTATAAAAAAGGCGTGTACTTTAGTTTCCAGACATTTCTAAGTTAATGGA TAGGCTGGTTTATTGCAAGCTGAACAGTCGTTTCTTCCCTTTGGATTAAA TAGGAAATAGCATGTTTAATAGATGCACTAATCCTATGAACTAGGCTAAT GTTTATTACAAAATTCCATGCAATCAAACACTTATTTGAAAAAATCGGCC GGGTCAACTACAGTAATACAGTGATCTTTTCTCTATAGGATGCCCTTTTC ATCAAGATTTGAAGGATTTAGAAATTTGAGTAGACTTGAGGGTCTCATAT TTATTCACAAACTGTGGTAACCATTTTCAAAAAAAGGGGGGGGGGGNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAC CTCCTAAATGTTAAGAACCGTACCCAACCCAGGTTTTTAAATCTGATCGA AATTCGTTATCAATTTTTTATATCTAGCCAAGAAAGCAGAAAATCAAGAA GAGCCTTATTCAGAAGAACTACACGAACAACATGCTGAATACTGGGGCAC GCGGCAACAATTATTGGCTGGTAAAGTCATCTGTGATTGGCTCTCAGAGG ACGATCAACCATCTATGGACCCTATCTACGGCGTCTTATTAAATCCAACT GCCGGCCGCGTTGGGCCAGGTGATTCTGGTTTTGTCCATAGTTTATTATA CGATAATTCCGGTGAATGGGCTCATCATTCGGCTGTTCACGATGCTTTTG GTTATTTGTTTACATTTCATCAACTTGGGCCGGGGTACAATTATATGTAT CGATCGTTTTTCGACGCAGATAATCCATTGGCTGGACAAATTTCTGGTAT TGATTTTTGGAAAAAATATGTGGCTGAAGTTGAAACCAAACTTAAAGTCA TTGAAAATTTCCGCTCAGTTTGAAAAAACAAAATTTTGTAGATAGACTTT CTTTGTATCATTATTTGTTAAAAAAACATAATTGAATTTGTGTAAATATA AACGCAGAATTGTCAAACGTATTGAGCACTTGCAATTTTTTTGGAGTTTA AGTTTTGTAAAAACTAATATTTTACTATGTCTTAGTTTCAAGTAAGTTAA CATTTTAAAAGTTGAAATAAACTTTTTGTCAAAACCTTTAATTTAAATAT TTTTGGTGCACTATGTCTCAGATGAGCACTTTGATATGCTAGTGCAGTAC AAAATTTTATTTAACGGTGACTCAGCAAAATATATTGATCTTAAGCCTAA ACTATTTTGCGATCTATACATCCAAACC

Coding sequence (CDS) from alignment at sc0000161:114599..123726-

>TCONS_00013001 ID=TCONS_00013001|Name=TCONS_00013001|organism=Clytia hemisphaerica|type=CDS|length=3588bp|location=Sequence derived from alignment at sc0000161:114599..123726- (Clytia hemisphaerica)
ATGCTGAATACTGGGGCACGCGGCAACAATTATTGGCTGGTAAAGTCATC
TGTGATTGGCTCTCAGAGGACGATCAACCATCTATGGACCCTATCTACGG
CGTCTTATTAAATCCAACTGCCGGCCGCGTTGGGCCAGGTGATTCTGGTT
TTGTCCATAGTTTATTATACGATAATTCCGGTGAATGGGCTCATCATTCG
GCTGTTCACGATGCTTTTGGTTATTTGTTTACATTTCATCAACTTGGGCC
GGGGTACAATTATATGTATCGATCGTTTTTCGACGCAGATAATCCATTGG
CTGGACAAATTTCTGGTATTGATTTTTGGAAAAAATATGTGGCTGAAGTT
GAAACCAAACTTAAAGTCATTGAAAATTTCCGCTCAGTTTGACCAAGAAA
GCAGAAAATCAAGAAGAGCCTTATTCAGAAGAACTACACGAACAACGACA
CGGATACTAATGCAGAAAAAGGCCCTCAAAATACCGGATCCTACCTCCAA
ATGTTGGATGCTTTGATTCGAACCCTCCCTAAAGATGAACTTAAAGAAGG
ATTCTGTCAAACCAAAGCTTTCCAAGGTTTATTATGGAAGATTGCTGATC
GAAGACATCGAGATGAAGAATCTGAGCAGAGATGTTATAGGAGATTGCTA
AGAGATTCCAAACGATTTGAAAAAGTCTTCCTTGAACGTGCAGATGGGTA
ATTGTTTGTTTTCTTTGGGTTCATGGTTGATAGACACATTAGGTTTTGGA
GTCAAACGAAGCAAAGTTCCCACAGATGACGAAGATGATGATCATATCGA
TCGAGATGAGATTGTTATCACCAAAATTGAAGAAATGGAAGCATACTGCA
AACCATTAATTTTCTTGCGATTCTGCGGGCAGACAAGTAGTGCAACTATG
CTGAATACTGGGGCACGCGGCAACAATTATTGGCTGGTAAAGTCATCTGT
GATTGGCTCTCAGAGGACGATCAACCATCTATGGACCCTATCTACGGCGT
CTTATTAAATCCAACTGCCGGCCGCGTTGGGCCAGGTGATTCTGGTTTTG
TCCATAGTTTATTATACGATAATTCCGGTGAATGGGCTCATCATTCGGCT
GTTCACGATGCTTTTGGTTATTTGTTTACATTTCATCAACTTGGGCCGGG
GTACAATTATATGTATCGATCGTTTTTCGACGCAGATAATCCATTGGCTG
GACAAATTTCTGGTATTGATTTTTGGAAAAAATATGTGGCTGAAGTTGAA
ACCAAACTTAAAGTCATTGAAAATTTCCGCTCAGTTTGACCAAGAAAGCA
GAAAATCAAGAAGAGCCTTATTCAGAAGAACTACACGAACAACGACACGG
ATACTAATGCAGAAAAAGGCCCTCAAAATACCGGATCCTACCTCCAAATG
TTGGATGCTTTGATTCGAACCCTCCCTAAAGATGAACTTAAAGAAGGATT
CTGTCAAACCAAAGCTTTCCAAGGTTTATTATGGAAGATTGCTGATCGAA
GACATCGAGATGAAGAATCTGAGCAGAGATGTTATAGGAGATTGCTAAGA
GATTCCAAACGATTTGAAAAAGTCTTCCTTGAACGTGCAGATGGGTAATT
GTTTGTTTTCTTTGGGTTCATGGTTGATAGACACATTAGGTTTTGGAGTC
AAACGAAGCAAAGTTCCCACAGATGACGAAGATGATGATCATATCGATCG
AGATGAGATTGTTATCACCAAAATTGAAGAAATGGAAGCATACTGCAAAC
CATTAATTTTCTTGCGATTCTGCGGGCAGACAAGTAGTGCAACTATGCTG
AATACTGGGGCACGCGGCAACAATTATTGGCTGGTAAAGTCATCTGTGAT
TGGCTCTCAGAGGACGATCAACCATCTATGGACCCTATCTACGGCGTCTT
ATTAAATCCAACTGCCGGCCGCGTTGGGCCAGGTGATTCTGGTTTTGTCC
ATAGTTTATTATACGATAATTCCGGTGAATGGGCTCATCATTCGGCTGTT
CACGATGCTTTTGGTTATTTGTTTACATTTCATCAACTTGGGCCGGGGTA
CAATTATATGTATCGATCGTTTTTCGACGCAGATAATCCATTGGCTGGAC
AAATTTCTGGTATTGATTTTTGGAAAAAATATGTGGCTGAAGTTGAAACC
AAACTTAAAGTCATTGAAAATTTCCGCTCAGTTTGACCAAGAAAGCAGAA
AATCAAGAAGAGCCTTATTCAGAAGAACTACACGAACAACGACACGGATA
CTAATGCAGAAAAAGGCCCTCAAAATACCGGATCCTACCTCCAAATGTTG
GATGCTTTGATTCGAACCCTCCCTAAAGATGAACTTAAAGAAGGATTCTG
TCAAACCAAAGCTTTCCAAGGTTTATTATGGAAGATTGCTGATCGAAGAC
ATCGAGATGAAGAATCTGAGCAGAGATGTTATAGGAGATTGCTAAGAGAT
TCCAAACGATTTGAAAAAGTCTTCCTTGAACGTGCAGATGGGTAATTGTT
TGTTTTCTTTGGGTTCATGGTTGATAGACACATTAGGTTTTGGAGTCAAA
CGAAGCAAAGTTCCCACAGATGACGAAGATGATGATCATATCGATCGAGA
TGAGATTGTTATCACCAAAATTGAAGAAATGGAAGCATACTGCAAACCAT
TAATTTTCTTGCGATTCTGCGGGCAGACAAGTAGTGCAACTATGCTGAAT
ACTGGGGCACGCGGCAACAATTATTGGCTGGTAAAGTCATCTGTGATTGG
CTCTCAGAGGACGATCAACCATCTATGGACCCTATCTACGGCGTCTTATT
AAATCCAACTGCCGGCCGCGTTGGGCCAGGTGATTCTGGTTTTGTCCATA
GTTTATTATACGATAATTCCGGTGAATGGGCTCATCATTCGGCTGTTCAC
GATGCTTTTGGTTATTTGTTTACATTTCATCAACTTGGGCCGGGGTACAA
TTATATGTATCGATCGTTTTTCGACGCAGATAATCCATTGGCTGGACAAA
TTTCTGGTATTGATTTTTGGAAAAAATATGTGGCTGAAGTTGAAACCAAA
CTTAAAGTCATTGAAAATTTCCGCTCAGTTTGACCAAGAAAGCAGAAAAT
CAAGAAGAGCCTTATTCAGAAGAACTACACGAACAACGACACGGATACTA
ATGCAGAAAAAGGCCCTCAAAATACCGGATCCTACCTCCAAATGTTGGAT
GCTTTGATTCGAACCCTCCCTAAAGATGAACTTAAAGAAGGATTCTGTCA
AACCAAAGCTTTCCAAGGTTTATTATGGAAGATTGCTGATCGAAGACATC
GAGATGAAGAATCTGAGCAGAGATGTTATAGGAGATTGCTAAGAGATTCC
AAACGATTTGAAAAAGTCTTCCTTGAACGTGCAGATGGGTAATTGTTTGT
TTTCTTTGGGTTCATGGTTGATAGACACATTAGGTTTTGGAGTCAAACGA
AGCAAAGTTCCCACAGATGACGAAGATGATGATCATATCGATCGAGATGA
GATTGTTATCACCAAAATTGAAGAAATGGAAGCATACTGCAAACCATTAA
TTTTCTTGCGATTCTGCGGGCAGACAAGTAGTGCAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007288XLOC_007288Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013001-exon-sc0000161-1575043694:123430..123726TCONS_00013001-exon-sc0000161-1575043694:123430..123726Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1575043694:122845..123091TCONS_00013001-exon-sc0000161-1575043694:122845..123091Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1575043694:118957..119010TCONS_00013001-exon-sc0000161-1575043694:118957..119010Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1575043694:114599..115345TCONS_00013001-exon-sc0000161-1575043694:114599..115345Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1510915933:123430..123726TCONS_00013001-exon-sc0000161-1510915933:123430..123726Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1510915933:122845..123091TCONS_00013001-exon-sc0000161-1510915933:122845..123091Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1510915933:118957..119010TCONS_00013001-exon-sc0000161-1510915933:118957..119010Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1510915933:114599..115345TCONS_00013001-exon-sc0000161-1510915933:114599..115345Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1491911889:123430..123726TCONS_00013001-exon-sc0000161-1491911889:123430..123726Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1491911889:122845..123091TCONS_00013001-exon-sc0000161-1491911889:122845..123091Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1491911889:118957..119010TCONS_00013001-exon-sc0000161-1491911889:118957..119010Clytia hemisphaericaexon
TCONS_00013001-exon-sc0000161-1491911889:114599..115345TCONS_00013001-exon-sc0000161-1491911889:114599..115345Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013001-proteinTCONS_00013001-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000161supercontigsc0000161:114599..123726 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
111.536 107.788 131.378 98.1009 11.7511 13.0002 25.7106 18.7288 19.5519 32.3539 17.8126 12.2743 5.21577 4.98673 17.6034 23.659 13.2677 12.0366 10.1872 13.37 3.26208 2.18234 34.7418 31.1185 6.41531 7.99185 20.3176 9.02913 5.84506 7.46012
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00013001 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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