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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012669 ID=TCONS_00012669|Name=TCONS_00012669|organism=Clytia hemisphaerica|type=transcript|length=956bp
GTATTTTACCTTTTTCATAGTCCTCCTGGTAGATTTCAAAACTTcaccga
gacaggggtgtataagtcTTACATTTTACTTTAAGGAGATGGGGGTGTAT
AAATATTAACTATTCCCAGGTTTACAGATGTTTTTTTCTGtctataaact
ttcgcgaatggcccttaaagaattttcaaaaaatgctgtgGCGAAGGAAT
TTGTCCGCGGAGCCATACTTTCGATTTTCAGATGCGGAACATACGAAACT
TAGAATACGGGCATTGTGAGATAACAATGGTTCAGAACCCTGATCTTGCC
ACTCCATGCNNNNNNNNNNAGGAATTTGTCCGCGCAGCCATACTTTCGAT
TTTCAGATGCGGAACATACGAAACTTAGAATACGGGCATTGTGAGATAAC
AATGGTTCAGAACCCTGATCTTGTCACTCCATGCTTATTACTAGGTCTCC
AGTGGTCTAGATTGGATGAATCACAACAATTCTTCTCTCgtgctattttc
tttttttctttttcatttcagtcattttcatttATTATGGGAACACAATT
GCAATATCATTTATCCAGATGATACGtatattttccacattttccacTGT
CGTAATATCATAATGATACACATTCGTTGGCGAAGGCAAGAATCTGGAAA
CCTTCTGGGGAATACCTATGTGTCAGAGATCCGGTGGAATTTTCATCCAC
ACTGAAggaaaaagctccaccggggcggcATTGAAACAGTGGTGCGTGTG
CGCGAGAGAATGAAAAGAACGcccagaaagaaaagaaagaccaaCGAAGT
TACAGTCTCTATTCTATTCTAACTTGATTGTAATGATTCGTGacctcatt
tttaattttcgccactttttttaatgttttatgtatttcgtaacgtatat
tattttatgaattgttaaatttaataaaaaaggtggttcttattttcttc
ttcgcG Run BLAST on NCBI transcript from alignment at sc0000146:385610..386565 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012669 ID=TCONS_00012669|Name=TCONS_00012669|organism=Clytia hemisphaerica|type=transcript|length=956bp|location=Sequence derived from alignment at sc0000146:385610..386565 (Clytia hemisphaerica)
Cgcgaagaagaaaataagaaccaccttttttattaaatttaacaattcat
aaaataatatacgttacgaaatacataaaacattaaaaaaagtggcgaaa
attaaaaatgaggtCACGAATCATTACAATCAAGTTAGAATAGAATAGAG
ACTGTAACTTCGttggtctttcttttctttctgggCGTTCTTTTCATTCT
CTCGCGCACACGCACCACTGTTTCAATgccgccccggtggagctttttcc
TTCAGTGTGGATGAAAATTCCACCGGATCTCTGACACATAGGTATTCCCC
AGAAGGTTTCCAGATTCTTGCCTTCGCCAACGAATGTGTATCATTATGAT
ATTACGACAgtggaaaatgtggaaaatataCGTATCATCTGGATAAATGA
TATTGCAATTGTGTTCCCATAATaaatgaaaatgactgaaatgaaaaaga
aaaaaagaaaatagcacGAGAGAAGAATTGTTGTGATTCATCCAATCTAG
ACCACTGGAGACCTAGTAATAAGCATGGAGTGACAAGATCAGGGTTCTGA
ACCATTGTTATCTCACAATGCCCGTATTCTAAGTTTCGTATGTTCCGCAT
CTGAAAATCGAAAGTATGGCTGCGCGGACAAATTCCTNNNNNNNNNNGCA
TGGAGTGGCAAGATCAGGGTTCTGAACCATTGTTATCTCACAATGCCCGT
ATTCTAAGTTTCGTATGTTCCGCATCTGAAAATCGAAAGTATGGCTCCGC
GGACAAATTCCTTCGCcacagcattttttgaaaattctttaagggccatt
cgcgaaagtttatagaCAGAAAAAAACATCTGTAAACCTGGGAATAGTTA
ATATTTATACACCCCCATCTCCTTAAAGTAAAATGTAAgacttatacacc
cctgtctcggtgAAGTTTTGAAATCTACCAGGAGGACTATGAAAAAGGTA
AAATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012669-exon-sc0000146-1491911889:385610..386565 | TCONS_00012669-exon-sc0000146-1491911889:385610..386565 | Clytia hemisphaerica | exon |
| TCONS_00012669-exon-sc0000146-1510915933:385610..386565 | TCONS_00012669-exon-sc0000146-1510915933:385610..386565 | Clytia hemisphaerica | exon |
| TCONS_00012669-exon-sc0000146-1575043694:385610..386565 | TCONS_00012669-exon-sc0000146-1575043694:385610..386565 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000146 | supercontig | sc0000146:385610..386565 . |
Blast
The following BLAST results are available for this feature:
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