TCONS_00012483 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012483
Unique NameTCONS_00012483
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4636

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012483 ID=TCONS_00012483|Name=TCONS_00012483|organism=Clytia hemisphaerica|type=transcript|length=4636bp
ATTGCGAACATCTTTTTAATATATTGTCGGCACTCAGCAACATTCatcgt
caatatattgcctgacaatatattgtatAGTATGCAGccttaataaaaaa
atcaactaACTCTATACCTTATTAAAGAAATAAGGTGTTCTTATGTATAT
ATGATCTGAAAGTTCCTGAAATTctgattgtgatttttttaattgtttta
ataTTCAATCCAGGATTCTTGTCTTTCGATAAAATGACTGTCCATGTCGT
AAAAGGAGATTTGTCCagtttcattttatatttagGTAATATTGCCATAT
TCTCAACTTTGCTTTGGTCCCCAATGTTGTTATCAGTATCACCAGATTTG
TCGGTAGAATCAGCGTTCATTGTTGGTTGAGAATCCTCGGAATTCAGTAT
TGAGTTTTTCAATTCTTTCACTGTTTCTTGGAAGGAATGAATATCTGATT
TCACTTTATTGACGTCGACTGTTGAAATTTCATGAGATTCTAATTTGTCT
TTGTTCTCAATATTGTTAGATTCAACCTTGATATCTGATGCAGGAGTATT
CACATTGGCTGCGTTGATAGGTGAAAGTTCATTGGTACCTGTAGTTCCAT
CTTGTCTCTTGGTTGGTGAGATCTCATGAGAGCTTAAACTGTCATTCGTC
GGTATAACACTTCGTGCAGTCAAAGGTGGAGATGGCTGTCCTGCTGGTGT
TTGCAAAGACTGTTGTTGCCAATTATTGTAAAAGAACAGTAGGTTTTTAT
CAATATCTCCTTGCTCTATGATAGATTTCATTGGGTTATCAGTTAATGTA
TAAACAAGTTCGTGCAAGCTAGTATCTTCGTAAGTGAGGAATGTATCCTT
CCCGACACGTGTTCGATAAACACCAGTGGAAGTTAAAAACAATTTAAGTT
CTTTATTTATTGTATTTGCTCCGAGTAAAACAATATCGATAGAGTTAACA
ATGATTGTATCTTTATTGAAGAACTCACGATCATCTAGATTAATTTTGAA
TGTAAAAGCATTGAAGGTGTGAAGTTGTttgattttattgtttaaacAAT
CATTGGCAATGTCTTGCAGATCGTTTAAAGATGTTGTGTCGCGTAGTTCG
TCTATTTTGATTTGGCGTTGGGCGCATGCAAATTTACTCATATAGTCTGT
ACGTTTAGATGGGTTTTGAGCATCATTGAAACATCTGCAATATTTTGGTT
CTTCGTGTGTTATCTCTTGAGTAAACGAGGTTCTGGGTTGCTTCAATGCT
TTGGTGGTTGATGGATCCTGTTTCGAAAGAGTATCAACATCATTTAAGAT
ATCTTTTAAGGAATCTACGATATTGAATCCTCGGTAATCAACTGGGCAGG
ATTGAAAATTCTTGTAGAAATACGTATCACACCAGAGGCGAATACTACCA
ATCAActcaatttttaaattcaaaacctCAGATTCTAAATCCATCCTAAA
TTCACGAATCAGTTTGTTTTTATCTTCTACATCATTTTGGGTATTACTTC
TAGAAGCTTTTGTATGAAGGACCAAAGCTTTCTGGTAATTGACCAGATAT
GTTTGGTAAAGCTCAATTACAGTCATCTGATAGCCATAATTCGATAACAT
TTCCTGTACAATATCTTCAGCAATATCGACCATATTCAATATCGGATATC
TGACTTCTAGCTTCTGAAACATGTGGTTGACACTGGTTGAATTGAGAACA
GAAACCAACCAAGTTTTTATTCCTGACCATTGCAATGAAGTATCAATACT
GACATTCAAACCTTTGTTAAACATTGCATTCACATTCGTTGGATTGTAGA
AAGATAAAGGTTCTGgtattttatcaaaaacacgCCGAGCTGTAATATCC
CCGTCTAAAGATTTTCCAGCTTCTAATAAATCATTGATGCAGATAGTCAA
TTTCACAATTTGATCTGGCCATAATCGTTCTTGTTTCAGTATATCCAGTC
TTCttaaattttctctgattttcttATAAACTGATGTctcattagacttt
ttctttttcagaatcCGATTTACCAATTTAGATACGTTTTCTACATAGCT
GTGAAACTTCGATTCCCGTCCTTCAATTTTTGGCTTTATCTTACTAAACG
CCACAGAAACGTCATCCAGAGATAACACCAATCTCCGAATATTCCTCAGG
TTCTCCACCACATTCTCTGTCGATTTGGGTTTCCATTCACTTTCAATTGA
TTTCAATGTATGTTCAAATAAATTCTGATCTTCAAAAAGTAATGCTAAAG
CTTTAACAACACTTGTGATCATTTTGGTACTGGTGAAGGAGTTAGTACTT
TTGTTGATTCTGGCAAAGTCCTTTTCATCTTCATCGACTTTCTTCTTATA
CTTGTTGAACATAGATACCAATTGGTATAACAGTGGTCTTCCATTGGTGT
GTGAATCTAATGCATATGATAACCGATCTCTATACAAGTTAATGATATGA
TAAGCATGATCTAATGTCAGCCATTGAAATTTATTATACTCCTTTTCAAC
TTCCTCTATTGACACAATCTCGTTACCcaaatttttagcattttcttcct
tttctaaaatttttgttCCATATTGTGATAACAAGTAAGTCCCGTCGTTT
AGATTTCTCAAAAAGACCCCCGACATTTCTTTTATTGTGTTACGATCTTT
GTTTAGCATTCGTAAGTATTTATTCATATTCAAAACAGCTTCCCAAGCCA
TAGTTTCATCGTCTAAATCGAAATCCTGATTGAAAGTCAAATTTCTAGGA
AAGTTCATACTGACGTACCAAAAGTCTTTAATTTCAAGGTTAAAACCAAG
TTTTGATCCTGCTTGCCGTTTTAAAAGTCCTCCAATATTTTGGGAAATGC
ACAAAGCTATTGCACGTGTAAAAATAGGATCTACGTCAGTAGATTGTTGA
AAAGGTACTGAAAGCACGTTCAAGTCTTGTAATGAAAATTCAGATTTTCC
TGGATCGACATCAACgctattttgtaatttttttccttGTGAAAAAGCAC
CAATTTTAAAGTAATGCACTGTTAGTGACTTTTTACGAGGCACTTTGAAA
GTTCTTGAAATGAAAACATAGTAAGCTGTCACGACAACTTCCTCATAAAC
ATCGAAAAGCATTTCTATTTTACTTAAATCGTAACTTAAAGCACGGATGT
ATAAACGTTTCTTATCGAAAATAGTTTCATTTGAATGCGTTAAGATTGTA
TTCGTAAAATGACACGTCTCGAAAAATGTTCTTCGAAATCTTTCATGAGT
CTTTCCAATTATAACTGACACTTGTTGATCTCTATCTTCATTCAATGTCT
GTTTAGTATCATTATTGTTTTTGATCAACTTGATCTTCACAATCCTCTTC
AAGTTGTAATTATCGTAGATCTCATTCAGTTGCTTGTAATGATGGTAGAT
CGGTGTTCTCGCGTCTGTGGTAGTCGGAGTCATAGTCACAATAAACGATT
TGTTTACTTTAACTCGTTTCAAAGAAATAGCAGAATCTCCACTACTCATT
AAGTTTATTTTCAGTCTTTTTATTTTGACTCCTTCAAGTaagttttccat
tttttggTTAGATACATCTCCTTGTAGATCGATTTGTGCATCTTTAACAG
TTCTAGAAAACTGCTTTGTTGAATTGTGTAAAGAAAtacttgatttgttt
tgatattcaATCCGAAAGGTCTTTAATACAGCTGGAAAGCACGTTTTACT
AATACAGTCAAAGTTCATTGATTCCTCGGGGCTTAGAATGATGATAAGTT
CTTTGAGATTCAATGCAGTATTTGAAAGATGAACATTGACGTTGTGTCTT
GTCTTCAATTCCAAAGTGAGTGATTTAACGTTGGGTATCAAAGAGAAGAA
ATCAGTGTCTTTATTACCAAGACTTGTCAATTTTGGAAAACTGCTAAATT
TAAGCTCTTTGACGGATTTCAGAAGAGGATAATCTGTGGCAGATGGAAAA
CAGAATTGGCTACCGTCTTTGTTGTTTTCATTTGTTGAGAAACAGCTACC
GTTAATTACTGTTTTTATTGAATCGCGAACCGTcattgaaattgattttt
cacttttctgaTGAAATTGAAGCTTACCAAGACGTTGCAGAGTTTCCATA
GATGAACAGTTAATAGTGTAATCATAGTTTGGAAGTTTTGTTGCATTTCC
AATGATAGTTGTTGAAGATGACGACAAAGGTGTAGAGGATGGTAACAATG
ATGTTGAACATGAACAAATTTTGTTAcacgatttcaaaaattctGTTGAA
GCTTTATTGTCTTTAGTTAGATGAACAGCTTTTTGTACTTGGATTCTGTT
GTTTTTCCCTCTTTTACTATGATGGTTCTTGATATGTTGGCGATGACCAG
TGATTGATGAAACAGGGTCGTCGCTTTTGACAACCAGATCTTCCAATGAA
GAGTTTGTACTGTTATTAATTCTCGGTGAATCGTTAGAATGGTCAAACAT
CAATGAATGTTGTCGAATGTCGGTGATTTGTTTGCCAGGAATGATGGAAA
AAAGGCAACCAAATAGCAGAATCTTCCTAAGAAGATACAGCATGGTCAAT
ATTGGTCTTATCCAAACAAAGCTTTAATTAATAACTGCATGATAATGTTT
ACGAATATTTCATTAattgaaatactttttgaaaac
Run BLAST on NCBI

protein sequence of TCONS_00012483-protein

>TCONS_00012483-protein ID=TCONS_00012483-protein|Name=TCONS_00012483-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1473bp
MLYLLRKILLFGCLFSIIPGKQITDIRQHSLMFDHSNDSPRINNSTNSSL
EDLVVKSDDPVSSITGHRQHIKNHHSKRGKNNRIQVQKAVHLTKDNKAST
EFLKSCNKICSCSTSLLPSSTPLSSSSTTIIGNATKLPNYDYTINCSSME
TLQRLGKLQFHQKSEKSISMTVRDSIKTVINGSCFSTNENNKDGSQFCFP
SATDYPLLKSVKELKFSSFPKLTSLGNKDTDFFSLIPNVKSLTLELKTRH
NVNVHLSNTALNLKELIIILSPEESMNFDCISKTCFPAVLKTFRIEYQNK
SSISLHNSTKQFSRTVKDAQIDLQGDVSNQKMENLLEGVKIKRLKINLMS
SGDSAISLKRVKVNKSFIVTMTPTTTDARTPIYHHYKQLNEIYDNYNLKR
IVKIKLIKNNNDTKQTLNEDRDQQVSVIIGKTHERFRRTFFETCHFTNTI
LTHSNETIFDKKRLYIRALSYDLSKIEMLFDVYEEVVVTAYYVFISRTFK
VPRKKSLTVHYFKIGAFSQGKKLQNSVDVDPGKSEFSLQDLNVLSVPFQQ
STDVDPIFTRAIALCISQNIGGLLKRQAGSKLGFNLEIKDFWYVSMNFPR
NLTFNQDFDLDDETMAWEAVLNMNKYLRMLNKDRNTIKEMSGVFLRNLND
GTYLLSQYGTKILEKEENAKNLGNEIVSIEEVEKEYNKFQWLTLDHAYHI
INLYRDRLSYALDSHTNGRPLLYQLVSMFNKYKKKVDEDEKDFARINKST
NSFTSTKMITSVVKALALLFEDQNLFEHTLKSIESEWKPKSTENVVENLR
NIRRLVLSLDDVSVAFSKIKPKIEGRESKFHSYVENVSKLVNRILKKKKS
NETSVYKKIRENLRRLDILKQERLWPDQIVKLTICINDLLEAGKSLDGDI
TARRVFDKIPEPLSFYNPTNVNAMFNKGLNVSIDTSLQWSGIKTWLVSVL
NSTSVNHMFQKLEVRYPILNMVDIAEDIVQEMLSNYGYQMTVIELYQTYL
VNYQKALVLHTKASRSNTQNDVEDKNKLIREFRMDLESEVLNLKIELIGS
IRLWCDTYFYKNFQSCPVDYRGFNIVDSLKDILNDVDTLSKQDPSTTKAL
KQPRTSFTQEITHEEPKYCRCFNDAQNPSKRTDYMSKFACAQRQIKIDEL
RDTTSLNDLQDIANDCLNNKIKQLHTFNAFTFKINLDDREFFNKDTIIVN
SIDIVLLGANTINKELKLFLTSTGVYRTRVGKDTFLTYEDTSLHELVYTL
TDNPMKSIIEQGDIDKNLLFFYNNWQQQSLQTPAGQPSPPLTARSVIPTN
DSLSSHEISPTKRQDGTTGTNELSPINAANVNTPASDIKVESNNIENKDK
LESHEISTVDVNKVKSDIHSFQETVKELKNSILNSEDSQPTMNADSTDKS
GDTDNNIGDQSKVENMAILPKYKMKLDKSPFTTWTVILSKDKNPGLNIKT
IKKITIRISGTFRSYIHKNTLFL
Run BLAST on NCBI

transcript from alignment at sc0000144:526139..530774

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012483 ID=TCONS_00012483|Name=TCONS_00012483|organism=Clytia hemisphaerica|type=transcript|length=4636bp|location=Sequence derived from alignment at sc0000144:526139..530774 (Clytia hemisphaerica)
gttttcaaaaagtatttcaatTAATGAAATATTCGTAAACATTATCATGC AGTTATTAATTAAAGCTTTGTTTGGATAAGACCAATATTGACCATGCTGT ATCTTCTTAGGAAGATTCTGCTATTTGGTTGCCTTTTTTCCATCATTCCT GGCAAACAAATCACCGACATTCGACAACATTCATTGATGTTTGACCATTC TAACGATTCACCGAGAATTAATAACAGTACAAACTCTTCATTGGAAGATC TGGTTGTCAAAAGCGACGACCCTGTTTCATCAATCACTGGTCATCGCCAA CATATCAAGAACCATCATAGTAAAAGAGGGAAAAACAACAGAATCCAAGT ACAAAAAGCTGTTCATCTAACTAAAGACAATAAAGCTTCAACagaatttt tgaaatcgtgTAACAAAATTTGTTCATGTTCAACATCATTGTTACCATCC TCTACACCTTTGTCGTCATCTTCAACAACTATCATTGGAAATGCAACAAA ACTTCCAAACTATGATTACACTATTAACTGTTCATCTATGGAAACTCTGC AACGTCTTGGTAAGCTTCAATTTCAtcagaaaagtgaaaaatcaatttca atgACGGTTCGCGATTCAATAAAAACAGTAATTAACGGTAGCTGTTTCTC AACAAATGAAAACAACAAAGACGGTAGCCAATTCTGTTTTCCATCTGCCA CAGATTATCCTCTTCTGAAATCCGTCAAAGAGCTTAAATTTAGCAGTTTT CCAAAATTGACAAGTCTTGGTAATAAAGACACTGATTTCTTCTCTTTGAT ACCCAACGTTAAATCACTCACTTTGGAATTGAAGACAAGACACAACGTCA ATGTTCATCTTTCAAATACTGCATTGAATCTCAAAGAACTTATCATCATT CTAAGCCCCGAGGAATCAATGAACTTTGACTGTATTAGTAAAACGTGCTT TCCAGCTGTATTAAAGACCTTTCGGATtgaatatcaaaacaaatcaagta TTTCTTTACACAATTCAACAAAGCAGTTTTCTAGAACTGTTAAAGATGCA CAAATCGATCTACAAGGAGATGTATCTAAccaaaaaatggaaaacttACT TGAAGGAGTCAAAATAAAAAGACTGAAAATAAACTTAATGAGTAGTGGAG ATTCTGCTATTTCTTTGAAACGAGTTAAAGTAAACAAATCGTTTATTGTG ACTATGACTCCGACTACCACAGACGCGAGAACACCGATCTACCATCATTA CAAGCAACTGAATGAGATCTACGATAATTACAACTTGAAGAGGATTGTGA AGATCAAGTTGATCAAAAACAATAATGATACTAAACAGACATTGAATGAA GATAGAGATCAACAAGTGTCAGTTATAATTGGAAAGACTCATGAAAGATT TCGAAGAACATTTTTCGAGACGTGTCATTTTACGAATACAATCTTAACGC ATTCAAATGAAACTATTTTCGATAAGAAACGTTTATACATCCGTGCTTTA AGTTACGATTTAAGTAAAATAGAAATGCTTTTCGATGTTTATGAGGAAGT TGTCGTGACAGCTTACTATGTTTTCATTTCAAGAACTTTCAAAGTGCCTC GTAAAAAGTCACTAACAGTGCATTACTTTAAAATTGGTGCTTTTTCACaa ggaaaaaaattacaaaatagcGTTGATGTCGATCCAGGAAAATCTGAATT TTCATTACAAGACTTGAACGTGCTTTCAGTACCTTTTCAACAATCTACTG ACGTAGATCCTATTTTTACACGTGCAATAGCTTTGTGCATTTCCCAAAAT ATTGGAGGACTTTTAAAACGGCAAGCAGGATCAAAACTTGGTTTTAACCT TGAAATTAAAGACTTTTGGTACGTCAGTATGAACTTTCCTAGAAATTTGA CTTTCAATCAGGATTTCGATTTAGACGATGAAACTATGGCTTGGGAAGCT GTTTTGAATATGAATAAATACTTACGAATGCTAAACAAAGATCGTAACAC AATAAAAGAAATGTCGGGGGTCTTTTTGAGAAATCTAAACGACGGGACTT ACTTGTTATCACAATATGGaacaaaaattttagaaaaggaagaaaatgct aaaaatttgGGTAACGAGATTGTGTCAATAGAGGAAGTTGAAAAGGAGTA TAATAAATTTCAATGGCTGACATTAGATCATGCTTATCATATCATTAACT TGTATAGAGATCGGTTATCATATGCATTAGATTCACACACCAATGGAAGA CCACTGTTATACCAATTGGTATCTATGTTCAACAAGTATAAGAAGAAAGT CGATGAAGATGAAAAGGACTTTGCCAGAATCAACAAAAGTACTAACTCCT TCACCAGTACCAAAATGATCACAAGTGTTGTTAAAGCTTTAGCATTACTT TTTGAAGATCAGAATTTATTTGAACATACATTGAAATCAATTGAAAGTGA ATGGAAACCCAAATCGACAGAGAATGTGGTGGAGAACCTGAGGAATATTC GGAGATTGGTGTTATCTCTGGATGACGTTTCTGTGGCGTTTAGTAAGATA AAGCCAAAAATTGAAGGACGGGAATCGAAGTTTCACAGCTATGTAGAAAA CGTATCTAAATTGGTAAATCGgattctgaaaaagaaaaagtctaatgagA CATCAGTTTATaagaaaatcagagaaaatttaaGAAGACTGGATATACTG AAACAAGAACGATTATGGCCAGATCAAATTGTGAAATTGACTATCTGCAT CAATGATTTATTAGAAGCTGGAAAATCTTTAGACGGGGATATTACAGCTC GGcgtgtttttgataaaatacCAGAACCTTTATCTTTCTACAATCCAACG AATGTGAATGCAATGTTTAACAAAGGTTTGAATGTCAGTATTGATACTTC ATTGCAATGGTCAGGAATAAAAACTTGGTTGGTTTCTGTTCTCAATTCAA CCAGTGTCAACCACATGTTTCAGAAGCTAGAAGTCAGATATCCGATATTG AATATGGTCGATATTGCTGAAGATATTGTACAGGAAATGTTATCGAATTA TGGCTATCAGATGACTGTAATTGAGCTTTACCAAACATATCTGGTCAATT ACCAGAAAGCTTTGGTCCTTCATACAAAAGCTTCTAGAAGTAATACCCAA AATGATGTAGAAGATAAAAACAAACTGATTCGTGAATTTAGGATGGATTT AGAATCTGaggttttgaatttaaaaattgagTTGATTGGTAGTATTCGCC TCTGGTGTGATACGTATTTCTACAAGAATTTTCAATCCTGCCCAGTTGAT TACCGAGGATTCAATATCGTAGATTCCTTAAAAGATATCTTAAATGATGT TGATACTCTTTCGAAACAGGATCCATCAACCACCAAAGCATTGAAGCAAC CCAGAACCTCGTTTACTCAAGAGATAACACACGAAGAACCAAAATATTGC AGATGTTTCAATGATGCTCAAAACCCATCTAAACGTACAGACTATATGAG TAAATTTGCATGCGCCCAACGCCAAATCAAAATAGACGAACTACGCGACA CAACATCTTTAAACGATCTGCAAGACATTGCCAATGATTgtttaaacaat aaaatcaaACAACTTCACACCTTCAATGCTTTTACATTCAAAATTAATCT AGATGATCGTGAGTTCTTCAATAAAGATACAATCATTGTTAACTCTATCG ATATTGTTTTACTCGGAGCAAATACAATAAATAAAGAACTTAAATTGTTT TTAACTTCCACTGGTGTTTATCGAACACGTGTCGGGAAGGATACATTCCT CACTTACGAAGATACTAGCTTGCACGAACTTGTTTATACATTAACTGATA ACCCAATGAAATCTATCATAGAGCAAGGAGATATTGATAAAAACCTACTG TTCTTTTACAATAATTGGCAACAACAGTCTTTGCAAACACCAGCAGGACA GCCATCTCCACCTTTGACTGCACGAAGTGTTATACCGACGAATGACAGTT TAAGCTCTCATGAGATCTCACCAACCAAGAGACAAGATGGAACTACAGGT ACCAATGAACTTTCACCTATCAACGCAGCCAATGTGAATACTCCTGCATC AGATATCAAGGTTGAATCTAACAATATTGAGAACAAAGACAAATTAGAAT CTCATGAAATTTCAACAGTCGACGTCAATAAAGTGAAATCAGATATTCAT TCCTTCCAAGAAACAGTGAAAGAATTGAAAAACTCAATACTGAATTCCGA GGATTCTCAACCAACAATGAACGCTGATTCTACCGACAAATCTGGTGATA CTGATAACAACATTGGGGACCAAAGCAAAGTTGAGAATATGGCAATATTA CctaaatataaaatgaaactGGACAAATCTCCTTTTACGACATGGACAGT CATTTTATCGAAAGACAAGAATCCTGGATTGAAtattaaaacaattaaaa aaatcacaatcagAATTTCAGGAACTTTCAGATCATATATACATAAGAAC ACCTTATTTCTTTAATAAGGTATAGAGTtagttgatttttttattaaggC TGCATACTatacaatatattgtcaggcaatatattgacgatGAATGTTGC TGAGTGCCGACAATATATTAAAAAGATGTTCGCAAT

Coding sequence (CDS) from alignment at sc0000144:526139..530774

>TCONS_00012483 ID=TCONS_00012483|Name=TCONS_00012483|organism=Clytia hemisphaerica|type=CDS|length=4422bp|location=Sequence derived from alignment at sc0000144:526139..530774 (Clytia hemisphaerica)
ATGCTGTATCTTCTTAGGAAGATTCTGCTATTTGGTTGCCTTTTTTCCAT
CATTCCTGGCAAACAAATCACCGACATTCGACAACATTCATTGATGTTTG
ACCATTCTAACGATTCACCGAGAATTAATAACAGTACAAACTCTTCATTG
GAAGATCTGGTTGTCAAAAGCGACGACCCTGTTTCATCAATCACTGGTCA
TCGCCAACATATCAAGAACCATCATAGTAAAAGAGGGAAAAACAACAGAA
TCCAAGTACAAAAAGCTGTTCATCTAACTAAAGACAATAAAGCTTCAACa
gaatttttgaaatcgtgTAACAAAATTTGTTCATGTTCAACATCATTGTT
ACCATCCTCTACACCTTTGTCGTCATCTTCAACAACTATCATTGGAAATG
CAACAAAACTTCCAAACTATGATTACACTATTAACTGTTCATCTATGGAA
ACTCTGCAACGTCTTGGTAAGCTTCAATTTCAtcagaaaagtgaaaaatc
aatttcaatgACGGTTCGCGATTCAATAAAAACAGTAATTAACGGTAGCT
GTTTCTCAACAAATGAAAACAACAAAGACGGTAGCCAATTCTGTTTTCCA
TCTGCCACAGATTATCCTCTTCTGAAATCCGTCAAAGAGCTTAAATTTAG
CAGTTTTCCAAAATTGACAAGTCTTGGTAATAAAGACACTGATTTCTTCT
CTTTGATACCCAACGTTAAATCACTCACTTTGGAATTGAAGACAAGACAC
AACGTCAATGTTCATCTTTCAAATACTGCATTGAATCTCAAAGAACTTAT
CATCATTCTAAGCCCCGAGGAATCAATGAACTTTGACTGTATTAGTAAAA
CGTGCTTTCCAGCTGTATTAAAGACCTTTCGGATtgaatatcaaaacaaa
tcaagtaTTTCTTTACACAATTCAACAAAGCAGTTTTCTAGAACTGTTAA
AGATGCACAAATCGATCTACAAGGAGATGTATCTAAccaaaaaatggaaa
acttACTTGAAGGAGTCAAAATAAAAAGACTGAAAATAAACTTAATGAGT
AGTGGAGATTCTGCTATTTCTTTGAAACGAGTTAAAGTAAACAAATCGTT
TATTGTGACTATGACTCCGACTACCACAGACGCGAGAACACCGATCTACC
ATCATTACAAGCAACTGAATGAGATCTACGATAATTACAACTTGAAGAGG
ATTGTGAAGATCAAGTTGATCAAAAACAATAATGATACTAAACAGACATT
GAATGAAGATAGAGATCAACAAGTGTCAGTTATAATTGGAAAGACTCATG
AAAGATTTCGAAGAACATTTTTCGAGACGTGTCATTTTACGAATACAATC
TTAACGCATTCAAATGAAACTATTTTCGATAAGAAACGTTTATACATCCG
TGCTTTAAGTTACGATTTAAGTAAAATAGAAATGCTTTTCGATGTTTATG
AGGAAGTTGTCGTGACAGCTTACTATGTTTTCATTTCAAGAACTTTCAAA
GTGCCTCGTAAAAAGTCACTAACAGTGCATTACTTTAAAATTGGTGCTTT
TTCACaaggaaaaaaattacaaaatagcGTTGATGTCGATCCAGGAAAAT
CTGAATTTTCATTACAAGACTTGAACGTGCTTTCAGTACCTTTTCAACAA
TCTACTGACGTAGATCCTATTTTTACACGTGCAATAGCTTTGTGCATTTC
CCAAAATATTGGAGGACTTTTAAAACGGCAAGCAGGATCAAAACTTGGTT
TTAACCTTGAAATTAAAGACTTTTGGTACGTCAGTATGAACTTTCCTAGA
AATTTGACTTTCAATCAGGATTTCGATTTAGACGATGAAACTATGGCTTG
GGAAGCTGTTTTGAATATGAATAAATACTTACGAATGCTAAACAAAGATC
GTAACACAATAAAAGAAATGTCGGGGGTCTTTTTGAGAAATCTAAACGAC
GGGACTTACTTGTTATCACAATATGGaacaaaaattttagaaaaggaaga
aaatgctaaaaatttgGGTAACGAGATTGTGTCAATAGAGGAAGTTGAAA
AGGAGTATAATAAATTTCAATGGCTGACATTAGATCATGCTTATCATATC
ATTAACTTGTATAGAGATCGGTTATCATATGCATTAGATTCACACACCAA
TGGAAGACCACTGTTATACCAATTGGTATCTATGTTCAACAAGTATAAGA
AGAAAGTCGATGAAGATGAAAAGGACTTTGCCAGAATCAACAAAAGTACT
AACTCCTTCACCAGTACCAAAATGATCACAAGTGTTGTTAAAGCTTTAGC
ATTACTTTTTGAAGATCAGAATTTATTTGAACATACATTGAAATCAATTG
AAAGTGAATGGAAACCCAAATCGACAGAGAATGTGGTGGAGAACCTGAGG
AATATTCGGAGATTGGTGTTATCTCTGGATGACGTTTCTGTGGCGTTTAG
TAAGATAAAGCCAAAAATTGAAGGACGGGAATCGAAGTTTCACAGCTATG
TAGAAAACGTATCTAAATTGGTAAATCGgattctgaaaaagaaaaagtct
aatgagACATCAGTTTATaagaaaatcagagaaaatttaaGAAGACTGGA
TATACTGAAACAAGAACGATTATGGCCAGATCAAATTGTGAAATTGACTA
TCTGCATCAATGATTTATTAGAAGCTGGAAAATCTTTAGACGGGGATATT
ACAGCTCGGcgtgtttttgataaaatacCAGAACCTTTATCTTTCTACAA
TCCAACGAATGTGAATGCAATGTTTAACAAAGGTTTGAATGTCAGTATTG
ATACTTCATTGCAATGGTCAGGAATAAAAACTTGGTTGGTTTCTGTTCTC
AATTCAACCAGTGTCAACCACATGTTTCAGAAGCTAGAAGTCAGATATCC
GATATTGAATATGGTCGATATTGCTGAAGATATTGTACAGGAAATGTTAT
CGAATTATGGCTATCAGATGACTGTAATTGAGCTTTACCAAACATATCTG
GTCAATTACCAGAAAGCTTTGGTCCTTCATACAAAAGCTTCTAGAAGTAA
TACCCAAAATGATGTAGAAGATAAAAACAAACTGATTCGTGAATTTAGGA
TGGATTTAGAATCTGaggttttgaatttaaaaattgagTTGATTGGTAGT
ATTCGCCTCTGGTGTGATACGTATTTCTACAAGAATTTTCAATCCTGCCC
AGTTGATTACCGAGGATTCAATATCGTAGATTCCTTAAAAGATATCTTAA
ATGATGTTGATACTCTTTCGAAACAGGATCCATCAACCACCAAAGCATTG
AAGCAACCCAGAACCTCGTTTACTCAAGAGATAACACACGAAGAACCAAA
ATATTGCAGATGTTTCAATGATGCTCAAAACCCATCTAAACGTACAGACT
ATATGAGTAAATTTGCATGCGCCCAACGCCAAATCAAAATAGACGAACTA
CGCGACACAACATCTTTAAACGATCTGCAAGACATTGCCAATGATTgttt
aaacaataaaatcaaACAACTTCACACCTTCAATGCTTTTACATTCAAAA
TTAATCTAGATGATCGTGAGTTCTTCAATAAAGATACAATCATTGTTAAC
TCTATCGATATTGTTTTACTCGGAGCAAATACAATAAATAAAGAACTTAA
ATTGTTTTTAACTTCCACTGGTGTTTATCGAACACGTGTCGGGAAGGATA
CATTCCTCACTTACGAAGATACTAGCTTGCACGAACTTGTTTATACATTA
ACTGATAACCCAATGAAATCTATCATAGAGCAAGGAGATATTGATAAAAA
CCTACTGTTCTTTTACAATAATTGGCAACAACAGTCTTTGCAAACACCAG
CAGGACAGCCATCTCCACCTTTGACTGCACGAAGTGTTATACCGACGAAT
GACAGTTTAAGCTCTCATGAGATCTCACCAACCAAGAGACAAGATGGAAC
TACAGGTACCAATGAACTTTCACCTATCAACGCAGCCAATGTGAATACTC
CTGCATCAGATATCAAGGTTGAATCTAACAATATTGAGAACAAAGACAAA
TTAGAATCTCATGAAATTTCAACAGTCGACGTCAATAAAGTGAAATCAGA
TATTCATTCCTTCCAAGAAACAGTGAAAGAATTGAAAAACTCAATACTGA
ATTCCGAGGATTCTCAACCAACAATGAACGCTGATTCTACCGACAAATCT
GGTGATACTGATAACAACATTGGGGACCAAAGCAAAGTTGAGAATATGGC
AATATTACctaaatataaaatgaaactGGACAAATCTCCTTTTACGACAT
GGACAGTCATTTTATCGAAAGACAAGAATCCTGGATTGAAtattaaaaca
attaaaaaaatcacaatcagAATTTCAGGAACTTTCAGATCATATATACA
TAAGAACACCTTATTTCTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007022XLOC_007022Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012483-proteinTCONS_00012483-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012483-exon-sc0000144-1491911889:526139..530774TCONS_00012483-exon-sc0000144-1491911889:526139..530774Clytia hemisphaericaexon
TCONS_00012483-exon-sc0000144-1510915933:526139..530774TCONS_00012483-exon-sc0000144-1510915933:526139..530774Clytia hemisphaericaexon
TCONS_00012483-exon-sc0000144-1575043694:526139..530774TCONS_00012483-exon-sc0000144-1575043694:526139..530774Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:526139..530774 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.152265 0.132853 0.0272214 0.124282 0.11888 0.0683203 1.47336 1.57225 0.135064 0.108744 1.02302 1.22757 1.87077 1.55536 0.992027 3.30123 0.758021 0.579627 0.008519 0.0534871 0.495894 0.374157 0.477809 0.52629 0.378586 0.783264 0.230763 0.0938196 0.0444743 0.0181249
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012483 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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