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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012476 ID=TCONS_00012476|Name=TCONS_00012476|organism=Clytia hemisphaerica|type=transcript|length=795bp
CTAAATGTTGTCTAATTCTTAGAGAATCAGCAGAAAGCAATATTGAAGAC
AGAAACAAAGAGGAGGAAGAAGAGGAAAGCGACCCAAACGATTATGTATT
TGATTATCAGAAAGCTCTGTTCACCATGAATCTCTACATCAGAAACATCA
ATGATGCTATAAGAGAAGGGGATGGGGAAAGACTCATGAGAACTTACAAG
TTTGTATTGATTTATTTCAAGGCGACTAATCACCATCAATACTGCTACTC
GTTAATCAAACTTTTCCATCAAATCAAACTGCTACCAGACATGGCCTTCA
AACTTATCTGGTGTAGATTCATCAACACAGCAGGTTATCTTGGAAGGAAC
ATAAGTTTAGACCTACATCTTGAGCATGTTAATGGTTTCTTGAAAGAACT
CATGAAAGGCTTGAGAAGCAATGTCAATGAGAAAAACGCTAAACGAAAGG
CTCATTCTcttaataatttgatgaaaattgtcAACAACACAGAAGCAGTC
CATTCTATTAAGACCACCAAAGGACACAGAAGAGAACCTAAAACTGCTGC
TGATGTAAAAAAACTAGCTCAATCATACAAAAATGCCGAAGTGTTTGTGT
TAAAGGAGAAAAGGCACCACGACTCCTACCCAAAATTCGAGAAATGTATT
TTGAAAAAGCGTAACATTACAGGATTTGTCAATtggatgaaaacaaaaga
aacagaATTTAAAGATAAATACTGTAAATAATCATGAGTTCCTGAAGTAC
AGGGTGTCCATAAAAAATAGGACAGAATTTGATGTATAGAGaaaa Run BLAST on NCBI protein sequence of TCONS_00012476-protein >TCONS_00012476-protein ID=TCONS_00012476-protein|Name=TCONS_00012476-protein|organism=Clytia hemisphaerica|type=polypeptide|length=242bp
KCCLILRESAESNIEDRNKEEEEEESDPNDYVFDYQKALFTMNLYIRNIN
DAIREGDGERLMRTYKFVLIYFKATNHHQYCYSLIKLFHQIKLLPDMAFK
LIWCRFINTAGYLGRNISLDLHLEHVNGFLKELMKGLRSNVNEKNAKRKA
HSLNNLMKIVNNTEAVHSIKTTKGHRREPKTAADVKKLAQSYKNAEVFVL
KEKRHHDSYPKFEKCILKKRNITGFVNWMKTKETEFKDKYCK Run BLAST on NCBI transcript from alignment at sc0000144:442107..442901 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012476 ID=TCONS_00012476|Name=TCONS_00012476|organism=Clytia hemisphaerica|type=transcript|length=795bp|location=Sequence derived from alignment at sc0000144:442107..442901 (Clytia hemisphaerica)
ttttCTCTATACATCAAATTCTGTCCTATTTTTTATGGACACCCTGTACT
TCAGGAACTCATGATTATTTACAGTATTTATCTTTAAATtctgtttcttt
tgttttcatccaATTGACAAATCCTGTAATGTTACGCTTTTTCAAAATAC
ATTTCTCGAATTTTGGGTAGGAGTCGTGGTGCCTTTTCTCCTTTAACACA
AACACTTCGGCATTTTTGTATGATTGAGCTAGTTTTTTTACATCAGCAGC
AGTTTTAGGTTCTCTTCTGTGTCCTTTGGTGGTCTTAATAGAATGGACTG
CTTCTGTGTTGTTgacaattttcatcaaattattaagAGAATGAGCCTTT
CGTTTAGCGTTTTTCTCATTGACATTGCTTCTCAAGCCTTTCATGAGTTC
TTTCAAGAAACCATTAACATGCTCAAGATGTAGGTCTAAACTTATGTTCC
TTCCAAGATAACCTGCTGTGTTGATGAATCTACACCAGATAAGTTTGAAG
GCCATGTCTGGTAGCAGTTTGATTTGATGGAAAAGTTTGATTAACGAGTA
GCAGTATTGATGGTGATTAGTCGCCTTGAAATAAATCAATACAAACTTGT
AAGTTCTCATGAGTCTTTCCCCATCCCCTTCTCTTATAGCATCATTGATG
TTTCTGATGTAGAGATTCATGGTGAACAGAGCTTTCTGATAATCAAATAC
ATAATCGTTTGGGTCGCTTTCCTCTTCTTCCTCCTCTTTGTTTCTGTCTT
CAATATTGCTTTCTGCTGATTCTCTAAGAATTAGACAACATTTAG Coding sequence (CDS) from alignment at sc0000144:442107..442901 >TCONS_00012476 ID=TCONS_00012476|Name=TCONS_00012476|organism=Clytia hemisphaerica|type=CDS|length=729bp|location=Sequence derived from alignment at sc0000144:442107..442901 (Clytia hemisphaerica)
TTATTTACAGTATTTATCTTTAAATtctgtttcttttgttttcatccaAT
TGACAAATCCTGTAATGTTACGCTTTTTCAAAATACATTTCTCGAATTTT
GGGTAGGAGTCGTGGTGCCTTTTCTCCTTTAACACAAACACTTCGGCATT
TTTGTATGATTGAGCTAGTTTTTTTACATCAGCAGCAGTTTTAGGTTCTC
TTCTGTGTCCTTTGGTGGTCTTAATAGAATGGACTGCTTCTGTGTTGTTg
acaattttcatcaaattattaagAGAATGAGCCTTTCGTTTAGCGTTTTT
CTCATTGACATTGCTTCTCAAGCCTTTCATGAGTTCTTTCAAGAAACCAT
TAACATGCTCAAGATGTAGGTCTAAACTTATGTTCCTTCCAAGATAACCT
GCTGTGTTGATGAATCTACACCAGATAAGTTTGAAGGCCATGTCTGGTAG
CAGTTTGATTTGATGGAAAAGTTTGATTAACGAGTAGCAGTATTGATGGT
GATTAGTCGCCTTGAAATAAATCAATACAAACTTGTAAGTTCTCATGAGT
CTTTCCCCATCCCCTTCTCTTATAGCATCATTGATGTTTCTGATGTAGAG
ATTCATGGTGAACAGAGCTTTCTGATAATCAAATACATAATCGTTTGGGT
CGCTTTCCTCTTCTTCCTCCTCTTTGTTTCTGTCTTCAATATTGCTTTCT
GCTGATTCTCTAAGAATTAGACAACATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012476-exon-sc0000144-1491911889:442107..442901 | TCONS_00012476-exon-sc0000144-1491911889:442107..442901 | Clytia hemisphaerica | exon |
| TCONS_00012476-exon-sc0000144-1510915933:442107..442901 | TCONS_00012476-exon-sc0000144-1510915933:442107..442901 | Clytia hemisphaerica | exon |
| TCONS_00012476-exon-sc0000144-1575043694:442107..442901 | TCONS_00012476-exon-sc0000144-1575043694:442107..442901 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000144 | supercontig | sc0000144:442107..442901 . |
Blast
The following BLAST results are available for this feature:
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