TCONS_00012447 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012447
Unique NameTCONS_00012447
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2019

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012447 ID=TCONS_00012447|Name=TCONS_00012447|organism=Clytia hemisphaerica|type=transcript|length=2019bp
GTCGTCTATTCTTTGACTTTGGGGTAATCCAAAGtcaacaaaaaagacaa
aagagatCAAACAAAACAACTTACTTTTTGCCTCAGTCAAAATGACATGT
AACAGCATTGTAAATTTATAATATAGTTTATGGATTTGTGCCATGATTTG
TGCATGTGTTTCAGACCGTTTGTCCAGTGCCCAAAAAGTTTTAGGTCCCA
TTTTCATGTCCATTGTGAAAAAGCAGCGTGATGGAGTCTCTTCTGTAGAT
ACCGTGGAGGAGTGCATTTCTTAGAAATGTCGGAcgagagtactttcgtt
ttcagataaaattattttgaatgagaaaccttttatgtttttttgccaga
ataactgaaatatttttaggATAATGCAGACTTGTAAGACTTATAATTCT
TTCCTAAAAGGTACAACTACTAagctttttatttaattttcatgtTCACT
AAAACGAGCTTTCCACTTTGCTTTTCTGTGCTCAGCGCCGTACATGCAAA
CAACTTTCGATTTTAACTTAGACCATTTCCCCATTTCCCTGCCTGGCGTC
ATTGCATCCTCAGCATCCTGTCCTGAAGTTCCAAAACAGTCATTTTAcag
ttttgatgattttaacaaAGGCTTCACTTACtttaattctttgtattttt
atatATGAAGCTCAAAGCTATATAACATGCAAAGGAATAGTTCCATTGGA
TGATACAACTGTTGATAAGGTAATATGTCATCATTCAGCTTGCTTGGTAC
TTTTTCATCACAAATATGGTTATGGAATGCCAGAAAAGGAATTTGAACAA
CTTGGGGAGCTGGCTGCTGCAAATTCGGAAGTTTTGATTGCTGAAATTGG
TACAACAGATTGGGGTGATACAGAAAATCACTACACTCGAAAGAAGTATG
ACGTAGCACTAGCTGATTATCCATCAGTTTTATTGTTCACTCGAAAAAGA
CCACCAATCAAATACCGAGGGGAAATAACGAAGTCCAATATTGTTTCATG
GCTCATGGAAAAAACAGGAGTGCTTTTAGAGAATGAGACGTCCCTGGCAC
AAATTCAACATCAAGCTAGACGATTCATGAAGATTTATTTAGACCAATCA
GAAGACGACAAACAAACTGAAGTTGAGAAGATGATCACAAAAACTGAAGA
TATGATTGGAAATATTCGAACGGACTCTGACAAAGCCCTGTGTAACGTCT
ACATTCAGGTTATGAAAAAAGTCTTAGCAAAGGGTCGGGACTATATTTCA
AATGAACCTTTGAGACTGCGGAATTTGATCAGAAGGGGACAAGTAAGCga
agaaaagaaaatagtttttcaaCAGAAAAtagatgttttgaaaagtttta
aaaaatatatggaaGAAGAAAATCACTGAAATCAAGAACGAGTGGCCCCA
CACGAAGAAGCAGATTATTAAAAACTGTCTATTTTTCATGAATGATTTTG
GTTTACACAATACGTAACACGCCACTTAGACGactggattttttgatttt
ttgggtgCATTCTTCTTCGGTAGTGTGAAGATGATTTTCCAACGAATAAA
TAACATTTTTCCCGGAAAGcGTGTTATGGCTTTGGGAACTTTTCTAACGA
TAGCAATTGGTTGCTCAAATAACAAAGGTCCGAACAACAGTTTAACACAC
GACTTAACGAAAATGGTTTGTCCGATGACGCCTGAAAACCATGGagcACA
CAGAGGCAGCAAAGTTTACAAGCAAGTTTGTTCAACGTGTCATTCTTGAT
CATTCATgtcattttgtttatttatgaCCGGGAAAATTTACCGATGGCCT
AAAATCAGCGAAAACTGCCCCCGCCCCCCGCCAAGGATTTATGTTCTTGA
AAACTAGGCTCCACTATTTTAAATGTATATTTAATCAAGGTTCTTTTatt
atttaataaatatttattttcattaaatttctttaacttcaattttgtgc
AACGGCCAACTAACCAAGTGAAAGATCTCTAAAACAATTTTTCTAATCGC
TAGAAAGGTTACAAACCGC
Run BLAST on NCBI

transcript from alignment at sc0000144:96287..107257-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012447 ID=TCONS_00012447|Name=TCONS_00012447|organism=Clytia hemisphaerica|type=transcript|length=10971bp|location=Sequence derived from alignment at sc0000144:96287..107257- (Clytia hemisphaerica)
GTCGTCTATTCTTTGACTTTGGGGTAATCCAAAGTCAACAAAAAAGACAA
AAGAGATCAAACAAAACAACTTACTTTTTGCCTCAGTCAAAATGACATGT
AACAGCATTGTAAATTTATAATATAGTTTATGGATTTGTGCCATGATTTG
TGCATGTGTTTCAGACCGTTTGTCCAGTGCCCAAAAAGTTTTAGGTCCCA
TTTTCATGTCCATTGTGAAAAAGCAGCGTGATGGAGTCTCTTCTGTAGAT
ACCGTGGAGGAGTGCATTTCTTAGAAATGTCGGACGAGAGTACTTTCGTT
TTCAGATAAAATTATTTTGAATGAGAAACCTTTTATGTTTTTTTGCCAGA
ATAACTGAAATATTTTTAGGATAATGCAGACTTGTAAGACTTATAATTCT
TTCCTAAAAGGTACAACTACTAAGCTTTTTATTTAATTTTCATGTTCACT
AAAACGAGCTTTCCACTTTGCTTTTCTGTGCTCAGCGCCGTACATGCAAA
CAACTTTCGATTTTAACTTAGACCATTTCCCCATTTCCCTGCCTGGCGTC
ATTGCATCCTCAGCATCCTGTCCTGAAGTTCCAAAACAGTCATTTTACAG
TTTTGATGATTTTAACAAAGGCTTCACTTACTTTAATTCTTTGTATTTTT
ATATATGAAGCTCAAAGCTATATAACATGCAAAGGAATAGTTCCATTGGA
TGATACAACTGTTGATAAGGTAAGATATACCTATAATATTTTTTAGAAGA
AAAATAGCTGAAAGTCTGATTGCTGAGCTAATATAATTTTCAAATTCTTA
CTAATTAAAAGAAGGGCTATCATCTTTGATCTGCTGTGATTCTGTAAACC
CGACCTTAATCAAATCGATACTGTGAAGTCGTGTAACTTGCATCAGTAGA
GGGAAACTTGCATAGCCATCAAATGACACTGACCAACAACCAAAGTAGCA
AAATTTCAGAACAATTGAATTTCGCCAGCAGCCAGGTCATAGACCTTTTT
TCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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CAAAAATGGTAGAGTAGAGCTGCGAGCGGAGCTGTGTAGTTCATTTGTTT
TGAAATTTTGCTGCTTTGATTAGTCAGTCATTTGATGGCTATGCAAGTCT
CCCTCCACTGATGCAAGTTACCCGACTTCACGGTACCCAACTGATTGCTC
TTGTGGGTTTTTTGGAATAATATTTAATTTTTAATTTACTAATGGATGTC
TTGGCTTTAAACAGGTTTGTCAGATCATCACGTTTACCTATTGCATCCAT
ACTGTATAGAATAGAAAGGTTCGTTTTTGAGAAATTAGGGAAAACTGCTT
TATTGAGGATGTTTTAAAACTTCAAATTTGAATATCTCAAAAAGTACTAA
TCAAAAGATTATGAAATCTTGTCCAGTGACAGGTATATTTGTAATTCCCA
ACTTCAATGACGTCAGCAGAAATTGGCAAAAATTGATTTTGGCCTAAAAA
AATTTCTTGCATGAATTGCTTCCTCTTAATAGGTTGCATCTTTGATAAAA
TTTCATCACATTTGGATCATGACTTCTTGAGATATTCAAATTTTAAGTTT
TATGACGTCATCAAGCAGATTTTCCTTAATTTCTCAAAAGAGACAAAAAA
TTAATATTATTAACAGCCATTTCTGAAATGTACATCCTAATACACTTTTT
TTGACATATAAATGACCATGCAATTTTCTGCACCAAACTTTTGGCTTTTT
TTGACATGCTACAGTTAAATATGCAGAGAAAAGAATCGATTAAAAAACAT
TCAACTATTTTATGGTTTGTTTTATCAGGTAATATGTCATCATTCAGCTT
GCTTGGTACTTTTTCATCACAAATATGGTTATGGAATGCCAGAAAAGGAA
TTTGAACAACTTGGGGAGCTGGCTGCTGCAAATTCGGAAGTTTTGATTGC
TGAAATTGGTACAACAGGTAGAACAAAACTTTATCGATTTATCAAGAGTT
GGGTCTGTATTTGAGAATGGTATTATCACTTTACCTCAAAAATAGCTTCN
AAGAATGGTATTATTACTTTACCTCAAAAATAGCTTCACAATTTTGAAAA
TTAAAATGAGGAGGAAAAAAAGTAACTTTTTATCCTGAAAACTTAATTTT
TGGTATAAGAATACTTTAAAGCCTCCTACAGCTGTATAATTATTTTTTCA
AATTATGCTCCAAAGTTTGCCCCAAGCTGTAAATATGGATATAACCCTTG
TCAAAATATATTGAGTATTTTGGGCGAGAAACTACTATTACTTTTGGGCT
ATTTGTTAAATTTAATCAAATATTTTAATTCGGGAGAGGTTTATAGTTGT
CAAGTTTATATTCTGAGGACCATTCATTTAAGTCTTAAGTCTAGTGTTAA
AACTCTGACTCAAAACTCTACCCTTCCAACCTAAGTTAGAGCGCTTCCAA
ATTGTTTGTGAATTGTGGCCATAAGATTTTGTGGGAATTTCCCTTTTTTC
TCAAATATTAAGTCATTGTAGCAATGACTTAACAGAAAATTAAAAGTTTT
CAATAACAAGAATGATAAGTCTATAGAGGTTCTTTGAACCCATTGCTCTA
AAATTGTAGTCTTGAATTATTAAATTATTTCTTTCTACCTTCGCTTGCAT
TCTGCTTTAGACAGTTTTAAAGTTTTGCAACATATCTCGTTAGTAAAAAA
TACCTCACGAAATTACCCCTACCACCTTGAAAGTGGTGAAATATATCCAA
TCACATGGCTCGCACCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTTTCGCAAAATT
GGCAAAACCTAAATTTAAGTAACACCGATTTTCATGTTTTACATCGTAAT
GCGCTTCTTTAAAGGTATAATTTATTATGCTAGGAGGGGTGATGATAGGT
GCAAAAAATTAACGAAAATTTGGACACGCATTAATTTACCAGAGTTCATT
TCTTTGAGAAATACAGTGAACATACTACATTTTCCTGGGAAAAAGCAGTT
AACATGCTTAATTTCCCTTGGAAAATACAGTGNAACCTAAATTTAAGTAA
CACCGATTTTCATGTTCTACATCGTAATGCGCTTCTTTAAAGGTATAATT
TATTATGCTAGGAGGGGTGATGATAGGTGCAAAAAATTAACGAAAATTTG
GACACGCATTAATTTACCTGAGTTCATTTCTTTGAGAAATACAGTGAACA
TACTACATTTTCCTGGGAAAAAGCAGTTAACATGCTTAATTTCCCTTGGA
AAATACAGTGAATACATTTCTTTTTCCTTGAAAAATACAGTGAACATATT
TAATCTTCCTTGGGAAATACAGTGAACATGCTTCATTTTCCTTGAGAAAT
ACAATGAACACATTTCATTTTCCTTGGGAAATACAGTTTAACCTGAGGAT
GAGTTAGTAAAGACTCGAAAAGCTTTGTTTAATAAAATCAAAATTTTGGT
GTTTTTTATTTATTGGAAATACAGTGAACACATTTCATTTTTCTTGAGAA
ATACAGTGAACATACTTAATTCACTTGGAAAGTACAGTGAAAGTATTTCA
TTTTCCTTTGAAAATATATAGTGAACATATTTCAATTTCCTTTGAAAATA
CGTTGCATACTTCATTTTCTGTGATGAATATAGTGAACACATTTCATTTT
CCTTGAAAAATACAGTGAACATGCTTAATTTGCCTTAGAAGGTACAGTGA
ACATTCTTCATTTTCCTTGGGAAATACAGTGAACATACTTTACTTCATTT
TCCTTGGGAAATACAGTGAATATGTTTCATTTTCCTAGGGAAATACAGTG
GACGCATTTCATCCCTTTGATAAATACAGTGAACATACTTCATTTTTCTT
GAGAAATACAGTGAGATACTTAATTTAATTGGGAAATACTGTTAACACAT
TTAATCTTCCTTGAGAAGAAAAATACAGTGAACATGCTCAATTTACTTGG
GAAATACTTTACTTTACATTTGATTTCTACTGGGGATGAAATCTAAGTCA
ATTTCCCAGAGGGGCTGATATTCCAGTGTATTTTCCCACCGGGGGCGAAA
ATTTTGTTAAATTTTTCAGTGGGGCCAGCGGGTCAGTGACACAGGGGTGT
TTTATATTAAGGTTGAAAAGGCTTAATCGCCTTCATATTATTTTCTAGAT
TGGGGTGATACAGAAAATCACTACACTCGAAAGAAGTATGACGTAGCACT
AGCTGATTATCCATCAGTTTTATTGTTCACTCGAAAAAGACCACCAATCA
AATACCGAGGGGAAATAACGAAGTCCAATATTGTTTCATGGCTCATGGAA
AAAACAGGAGTGCTTTTAGGTTTGTTGAGACTACTTCTGAGTTGATTTGG
TTTTATAAAAAGACTGGCATTCAACTAAACGAAAACCTAACACCATTATT
GAAAGAATTTTCTATAGAGTCATTAATCACAAAGAAATACTTCATCATAT
GTCTATACTTAAGTTTTAGCAGAATTATGATTATAAAACGTCGTTAGAGT
CAAGGGAATGGAATTTTAAAACCTTCAAGATTTGTGACGGATTTTTCGAA
AAGTATTCGTCGTCCTTTTTGTAAATGATTCTCATAGATTTATACTTTTG
CCGTCTCAAGGGTCTGAAAAATGTTTGATTAACGGGCCTCGAAATCGGAC
TGTGTGGTCGTTGTAATTTTGTCTGATCATTCAAGAGGACAGAACCAAAA
TTAGTTTTTAAGAATGGCTTTTCAAAATGAAAAAATATATTTACTTCATT
CATTCTCACCAGCCACAAAGCCTCTGCCATTCAAATTCGGGAATATCTTG
TAAAAAACGTATTGCTTTCTCTAATTAGAGAATGAGACGTCCCTGGCACA
AATTCAACATCAAGCTAGACGATTCATGAAGATTTATTTAGACCAATCAG
AAGACGACAAACAAACTGAAGTTGAGAAGATGATCACAAAAACTGAAGAT
ATGATTGGAAATATTCGAACGGACTCTGACAAAGCCCTGTGTAACGTCTA
CATTCAGGTTATGAAAAAAGTCTTAGCAAAGGGTCGGGACTATATTTCAA
ATGAACCTTTGAGACTGCGGAATTTGATCAGAAGGGGACAAGTAAGCGAA
GAAAAGAAAATAGTTTTTCAACAGAAAATAGATGTTTTGAAAAGTTTTAA
AAAATATATGGAAGAAGAAAATCACTGAAATCAAGAACGGTATGTTATTT
TTTCCCTCTATTTTGAAAGATTCCTCGAAATCGGTGTCACTTTGTGTAAC
TGAAATAGAATTGAAATAAAAACAAAATATTTTATTGACGCTAGTGGGAA
AAGATGTGAAAAACCTCGTGAAAAACAACGGTACTTGCCAACATTGACAA
ATTCGACCCAAATCCACTCAAAAGTGTAAAGTATCAAAAGTTTGATTTAT
GAAAAAAAAGTAACAAGAGGAAATAAAACTATTGCCCGGTAAGTCATAAA
ATAACAAAGAATTTTTTTATTGCTTTGTAGCCCTTCGTAATAAAAATAGT
TTTGCTTTCAAATTACACAAGAGCGATCACTTGTATTCCTGAATCCTATT
TGCAGGGTTTTTGTCATTGTCAATCACTTTCTTTGTACTTTCTCCGCTTC
GATGGTCACATTTTTTAATCGAATTCAAATTAATATGATGTTGTTCCTTA
CTCTCTAGAGTGGCCCCACACGAAGAAGCAGATTATTAAAAACTGTCTAT
TTTTCATGAATGATTTTGGTTTACACAATACGTAACACGCCACTTAGACG
ACTGGATTTTTTGATTTTTTGGGTGCATTCTTCTTCGGTAGTGTGAAGAT
GATTTTCCAACGAATAAATAACATTTTTCCCGGAAAGGTAAGTTCCATGC
CGTACGGCTAACTTTCCAAAAGTTTGATCAACATTCAAAGCGTTTTTCTG
AGAGCTCATTTGTCTACTTGGATCAATTACATAATAATTTTACCAGTCAG
ATTGATTAGAATGTTGATGAGAGAACTTTTTGAAAGATGTGGTAAGTACT
GGTCAATTTTTCTCCATGGCAGACAGTATTCATCCCAAGGGTCTAAAATT
TAGAACTGTATTGCTTGTAGACTTGTAGAGGAAGTTGCAGGCACGACGGA
AGCTTTTTATATCTGGTACGGCGAATGAGGAAATTTAAGCGATTTTATAG
CGATTTGACGGACGAAGAGGAAAACTTCGGGTATTTTTGTGAAAATCTGG
TACGGCGGCCGCCGTACCTGCTGTACCCGTTGCGTCGTGCCTGAGTTGTG
AGCTTGAATTCAAGTTCTGGTAGTAAGCTGCTGCTATAGGGTTTCAGGGT
CTGGATTAAAAACAATTATATTGTTTGAAAGAGTAGATTGACGAAAAAAA
CCTCAACGTCATCAAAGTACACATTATGCTTTTAAAAGAGCGTAATTTGT
TTTAAAACAAAAAACAGTTCCTTCTCCAAAACGTCTACTAAATCCACTTT
CTACCATTTTTTCATTTTGTTTTTCAGCGTGTTATGGCTTTGGGAACTTT
TCTAACGATAGCAATTGGTTGCTCAAATAACAAAGGTCCGAACAACAGTT
TAACACACGACTTAACGAAAATGGTTTGTCCGATGACGCCTGAAAACCAT
GGGTGAGTTTAAATGAAATATGCAAAATATACATAATCGTACATAATGGA
GTTTCTTGAGAGAGACTTGTTTTCAGTTATAAGAAAAATTCAATCAAGAT
CCATGTCTGTTGACATTAGCTCATAACTTGACAAGTATTTAGCAAATTTA
GAAAAGTTTGCCTTAACAAAAATATCTGACTCTTTCAAATAAAAGTATAT
CAGAGGCCAATAATACTTTTTTACTCAATCGATATCAGCGAATTACATCA
TAGTATCAAATCGTAAAACACCCTCCTAACGCGTTTTCTACTCTTTTCAT
TCCCACACAGCTAAGAACTGTCAGTTGGACATTTCCAATTGGATTATCGA
TAATAAGTAATAGTAAAATCATTATGACATTGAGGGAAATTAGGGATTAA
TACCCCGAGTTTCATTTTAAAATACTTTGAAATAGCACCAACGAAGTGAG
GACTTTTTCAAAGTATTTCAAATGATTCGAGGGGTATTAATCTTAATTTC
GTCTTATTTGTAAACTGCGTCTTGTTTGTGGCGGGACGGCGGAAAAGAGG
GCGTATTATCAGAAATTTTTGATGGGAGCGGGGTATTACAAATCAAGCGG
GTATTACAAAATAATACTCCTCCGTAGGATAAGAGCGCTCAACCTAAATA
AAATCAGTCATATAATTATTAAGGAAATAGCATCAGACAACTGTTTCTAT
GCACGTTAAGACGTCCGATCAGTCATTCCAGTCAATCCCTACCATAATTC
TTCCTCTAAAATTCTGAAACCTTCGAATATACTCGCTAATAAATAGAATT
TTCGTGGGACTGTGTTTTTCAATTTTATCACAGTGACTGTTTTTGGCACA
CTCACATTTAATCTCTCGATTTCTTTTCTCTCTTTCTTTTTTTCAGAGCA
CACAGAGGCAGCAAAGTTTACAAGCAAGTTTGTTCAACGTGTCATTCTTG
ATCATTCATGTCATTTTGTTTATTTATGACCGGGAAAATTTACCGATGGC
CTAAAATCAGCGAAAACTGCCCCCGCCCCCCGCCAAGGATTTATGTTCTT
GAAAACTAGGCTCCACTATTTTAAATGTATATTTAATCAAGGTTCTTTTA
TTATTTAATAAATATTTATTTTCATTAAATTTCTTTAACTTCAATTTTGT
GCAACGGCCAACTAACCAAGTGAAAGATCTCTAAAACAATTTTTCTAATC
GCTAGAAAGGTTACAAACCGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006989XLOC_006989Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012447-exon-sc0000144-1575043694:106539..107257TCONS_00012447-exon-sc0000144-1575043694:106539..107257Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1575043694:104341..104479TCONS_00012447-exon-sc0000144-1575043694:104341..104479Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1575043694:99789..99959TCONS_00012447-exon-sc0000144-1575043694:99789..99959Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1575043694:98919..99279TCONS_00012447-exon-sc0000144-1575043694:98919..99279Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1575043694:98271..98449TCONS_00012447-exon-sc0000144-1575043694:98271..98449Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1575043694:97506..97630TCONS_00012447-exon-sc0000144-1575043694:97506..97630Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1575043694:96287..96611TCONS_00012447-exon-sc0000144-1575043694:96287..96611Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1510915933:106539..107257TCONS_00012447-exon-sc0000144-1510915933:106539..107257Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1510915933:104341..104479TCONS_00012447-exon-sc0000144-1510915933:104341..104479Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1510915933:99789..99959TCONS_00012447-exon-sc0000144-1510915933:99789..99959Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1510915933:98919..99279TCONS_00012447-exon-sc0000144-1510915933:98919..99279Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1510915933:98271..98449TCONS_00012447-exon-sc0000144-1510915933:98271..98449Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1510915933:97506..97630TCONS_00012447-exon-sc0000144-1510915933:97506..97630Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1510915933:96287..96611TCONS_00012447-exon-sc0000144-1510915933:96287..96611Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1491911889:106539..107257TCONS_00012447-exon-sc0000144-1491911889:106539..107257Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1491911889:104341..104479TCONS_00012447-exon-sc0000144-1491911889:104341..104479Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1491911889:99789..99959TCONS_00012447-exon-sc0000144-1491911889:99789..99959Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1491911889:98919..99279TCONS_00012447-exon-sc0000144-1491911889:98919..99279Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1491911889:98271..98449TCONS_00012447-exon-sc0000144-1491911889:98271..98449Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1491911889:97506..97630TCONS_00012447-exon-sc0000144-1491911889:97506..97630Clytia hemisphaericaexon
TCONS_00012447-exon-sc0000144-1491911889:96287..96611TCONS_00012447-exon-sc0000144-1491911889:96287..96611Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:96287..107257 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.50841	1.89657	1.52872	0.332279	0.547758	0.381986	0.820931	0.852598	0.505643	0.905956	0.402655	1.11691	1.20492	2.22503	0.843181	0.554096	0.841205	0.860873	0.775459	1.17472	1.36589	0.870401	1.77539	1.98234	0.603888	1.95522	0.144715	1.26675	0.72801	1.92877
Blast
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BLAST of TCONS_00012447 vs. Swiss-Prot (Human)
Match: ERP29 (Endoplasmic reticulum resident protein 29 OS=Homo sapiens GN=ERP29 PE=1 SV=4)

HSP 1 Score: 102.064 bits (253), Expect = 1.099e-23
Identity = 66/232 (28.45%), Postives = 120/232 (51.72%), Query Frame = 3 
Query:  666 SYITCKGIVPLDDTTVDKVICHHSACLVLFHHKYGYGMPEKEFEQLGELAAANSEVLIAEIGTTDWGDTENHYTRKKYDVALADYPSVLLFTRK--RPPIKYRGEITKSNIVSWLMEKTGVLLENETSLAQIQHQARRFMKIYLDQSEDDKQTEVEKMITKTEDMIGNIRTDSDKALCNVYIQVMKKVLAKGRDYISNEPLRLRNLIRRGQVSEEKKIVFQQKIDVLKSFKK 1355
            S +  KG +PLD  T  KVI      LV F  +Y YG  + EF++L E +A++ ++L+AE+G +D+GD  N    +KY +    YP   LF       P+ Y G +    I  WL +  GV L     L      A  F++    ++        + ++ + +D + +++ ++ K     Y+++M K+L +G D+ ++E  R+  LI + ++S+ KK   Q+ +++L +F+K
Sbjct:   31 SGLHTKGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGEKQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWL-KGQGVYLGMPGCLPVYDALAGEFIRASGVEAR-------QALLKQGQDNLSSVK-ETQKKWAEQYLKIMGKILDQGEDFPASEMTRIARLIEKNKMSDGKKEELQKSLNILTAFQK 253
The following BLAST results are available for this feature:
BLAST of TCONS_00012447 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ERP291.099e-2328.45Endoplasmic reticulum resident protein 29 OS=Homo ... [more]
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