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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012442 ID=TCONS_00012442|Name=TCONS_00012442|organism=Clytia hemisphaerica|type=transcript|length=1430bp
ACGTTGATATTTGTTCTATTCTCTTGAAGTGATGTTTACTTTGCACACTG
ATGTTGACCAAAGTATCGATGATTTTTTGACATAAACTTTTCAGTGCTCA
gatttcaatatttcaatttttatgagaTGAACTCAGCTTTAGGTCCTTTA
GCACCACTCCTGGCTTTAGAAAATActgtttgaaataaaatactTGTGAA
GGTATAAACAAAGCAGAAGTATAAAAGCAATGCCTTTTGAAATCAGATTC
TAGTTCTAATCCAATTCTCATTTTCTGttgatttttcaggaaaaatctAA
ACAATACCAAAAAGTCGAAAATGAAAATGCACTGTTTCGTCTTGTTGTTG
TTCTTTGCAACATGGGAATTGGTTGAAGCGAAAGATGTTTGTGTTGAAGG
TTTCGTCATGGACAAATACTGCATTGATCTTGGTGTCCTACTTGATAACA
GAGCTGTCAGAACTCTTGAAAACCCTGAGAAACATTCAGTTCATTGCCTG
GTGGACGTCAACTTGTGTTTAAACACTGAATTCAATGTTCTCTTACCAAA
CCCTTCAGGGTCTCCAGCCTTTGCGTTGGCCCTACGACTTGACGGAGCCG
GTAAGCAAATGGCAATCGATAAAGCTAGAGTTAGTGGAATCTGCAGAAGT
TGTGCTGGTGGTGGTACAATCGAACATGGCTTCAGAGGAACCTTTATTGG
AAGCATTGCTGAAGAAGCTACAAGTTCTAAACCAGCACTTATGGCTGTCA
AAAGAATGGAAGTTTCACCAAAAGCTTTCAATCAGAGCAGTCTTGATGAT
GGTTGTGCTGGTTTTGACAGAATGAATCTCACCTTAATCACAGATGTTGC
GGGATTCGAGAAACCAAGTATAGCGCATGGTAGCTTGATGATCGTTGGTT
GGGGATTCCTTTTACCGACTGGTGTTGCGTCTGCTCGCCTTTTGAAACAT
CGTCCAAACGCTTTATGGTTTAAGATTCATCGCATCGTTCAAGTGTTGGG
TTTGATCGTTGCTGTCTGTGGATGGGGTGTTGCTCTCCATAACTTCGATG
TGTTCAGTGGACCGGGTACCACTTCGTACAGTCATGGTGTCCTGGGTATG
ACCGTCATGGTGCTCGGTCTTCTCCAACCTTTCAATGCTCTGATTCGACC
ACATCCACCAGAGGCTGGTGAAAAGAAAGCCCTAGCGCGTCTTATTTGGG
AGATCGTTCATAAATCGTCAGGCTATATTGCAGTCGTTTTAGCAGCCGTT
ACCATTTGTTTTGGAACGTTCGTTATTTGCTGTCATAATACAGAGTTTAG
AGCAGCCTGGATCGTCACACTAGCCTGGGTGCTTTGCTTTTCGATTTACT
GTGCTTTCGATGGATATAAATANGTTAGCCTGGGTGCTTTGCTTTTCCAT
TTACTGTGCTTTCGATGGATATAGATACCG Run BLAST on NCBI transcript from alignment at sc0000144:87649..89078- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012442 ID=TCONS_00012442|Name=TCONS_00012442|organism=Clytia hemisphaerica|type=transcript|length=1430bp|location=Sequence derived from alignment at sc0000144:87649..89078- (Clytia hemisphaerica)
ACGTTGATATTTGTTCTATTCTCTTGAAGTGATGTTTACTTTGCACACTG
ATGTTGACCAAAGTATCGATGATTTTTTGACATAAACTTTTCAGTGCTCA
GATTTCAATATTTCAATTTTTATGAGATGAACTCAGCTTTAGGTCCTTTA
GCACCACTCCTGGCTTTAGAAAATACTGTTTGAAATAAAATACTTGTGAA
GGTATAAACAAAGCAGAAGTATAAAAGCAATGCCTTTTGAAATCAGATTC
TAGTTCTAATCCAATTCTCATTTTCTGTTGATTTTTCAGGAAAAATCTAA
ACAATACCAAAAAGTCGAAAATGAAAATGCACTGTTTCGTCTTGTTGTTG
TTCTTTGCAACATGGGAATTGGTTGAAGCGAAAGATGTTTGTGTTGAAGG
TTTCGTCATGGACAAATACTGCATTGATCTTGGTGTCCTACTTGATAACA
GAGCTGTCAGAACTCTTGAAAACCCTGAGAAACATTCAGTTCATTGCCTG
GTGGACGTCAACTTGTGTTTAAACACTGAATTCAATGTTCTCTTACCAAA
CCCTTCAGGGTCTCCAGCCTTTGCGTTGGCCCTACGACTTGACGGAGCCG
GTAAGCAAATGGCAATCGATAAAGCTAGAGTTAGTGGAATCTGCAGAAGT
TGTGCTGGTGGTGGTACAATCGAACATGGCTTCAGAGGAACCTTTATTGG
AAGCATTGCTGAAGAAGCTACAAGTTCTAAACCAGCACTTATGGCTGTCA
AAAGAATGGAAGTTTCACCAAAAGCTTTCAATCAGAGCAGTCTTGATGAT
GGTTGTGCTGGTTTTGACAGAATGAATCTCACCTTAATCACAGATGTTGC
GGGATTCGAGAAACCAAGTATAGCGCATGGTAGCTTGATGATCGTTGGTT
GGGGATTCCTTTTACCGACTGGTGTTGCGTCTGCTCGCCTTTTGAAACAT
CGTCCAAACGCTTTATGGTTTAAGATTCATCGCATCGTTCAAGTGTTGGG
TTTGATCGTTGCTGTCTGTGGATGGGGTGTTGCTCTCCATAACTTCGATG
TGTTCAGTGGACCGGGTACCACTTCGTACAGTCATGGTGTCCTGGGTATG
ACCGTCATGGTGCTCGGTCTTCTCCAACCTTTCAATGCTCTGATTCGACC
ACATCCACCAGAGGCTGGTGAAAAGAAAGCCCTAGCGCGTCTTATTTGGG
AGATCGTTCATAAATCGTCAGGCTATATTGCAGTCGTTTTAGCAGCCGTT
ACCATTTGTTTTGGAACGTTCGTTATTTGCTGTCATAATACAGAGTTTAG
AGCAGCCTGGATCGTCACACTAGCCTGGGTGCTTTGCTTTTCGATTTACT
GTGCTTTCGATGGATATAAATANGTTAGCCTGGGTGCTTTGCTTTTCCAT
TTACTGTGCTTTCGATGGATATAGATACCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012442-exon-sc0000144-1575043694:87649..89078 | TCONS_00012442-exon-sc0000144-1575043694:87649..89078 | Clytia hemisphaerica | exon |
| TCONS_00012442-exon-sc0000144-1510915933:87649..89078 | TCONS_00012442-exon-sc0000144-1510915933:87649..89078 | Clytia hemisphaerica | exon |
| TCONS_00012442-exon-sc0000144-1491911889:87649..89078 | TCONS_00012442-exon-sc0000144-1491911889:87649..89078 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000144 | supercontig | sc0000144:87649..89078 - |
Blast
The following BLAST results are available for this feature:
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