TCONS_00012380 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012380
Unique NameTCONS_00012380
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2751

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012380 ID=TCONS_00012380|Name=TCONS_00012380|organism=Clytia hemisphaerica|type=transcript|length=2751bp
ATTCACTATGTTTCATTCCTATGATCACTTTCCCCAAAAGAAAATGGCTT
TTGAAAGTCTATATTTGGATCAAAGGCCATCAATAGGATTGGTTCATCCA
CAACCGCAACGAAAACATCGAGACGAGGAAATAGTAAAATCAAGTCAATC
GATGAATTCGCTTCATTTCTCACCACGTGACTCGGTCACAGTCCACTCGC
TATCACCCACCGAGCTTTCACGTTATGGCTCCTCTTACCCTCCTGGTAGA
GGACACGTGCATGGACCCCAGACCTCATGCCCCGTACACGGTCAAGAATC
AAGTCATCCCCACGATGAACGAAATGGCCGTCCGCCAAACCTTCCGTTCG
ATGCGCCGCACGGCTTCCATGGGTTACACGGGCCGCATCCTCGTTTTCGT
GAAGACATTTACATGAGACGACATTCATTAGATCGTAAAGAGCATTTACC
GCCCCCACCCCATCACGCCTTAGAAGAAGACTTGCGAAGAAGAGGAATGG
ATTTTAGAGGTTTTGCTGGTTTACCGCCCCATCTCTTGGATGAGCAATAC
AGGCGTCATTTGTTGAATGGAACGCATGAACACCCTCCACCCTTCAAAGA
ACCAGGACATGGACAAGTCTTTGTTCCACCGCATTTCTATTACGGTCGTG
AATATCCGCTCCCGGTTGACCCCTACCATCCGCACGCGTTATCCGCAGCG
CCGAGTGAACTTCTTCACAGATACGGAGGTGCACCTCCACCGGTCAGTCC
CAGGCTACTAGAAGCCTATCGACGTAATGAGCATGGTGTTTTGAGCTCGC
GCGAATTCGAAGCGGCCGAGCGACGATATGAAGAACGCCGGGAGAGTGCT
GACCAAAAAGAAAGTGTTATTCGACCAGCTTCTATCGATCTCTACCGCAA
GAAGAGTGCAGAAAATCATATGCACGaTCGTCGTAAACACAGTATTTCAC
TGGACAAGAAACCAGTCGTCCACGAAAAAGAGGAACCACCTCGAATGAAG
ATGCCCATTTTCAAAGGTTTGGAATGTAACAATAACAACATCAAACCACA
CCCTAAACAAAATGGTACATCACATCAAGCCAACTCCATCACCTCGCTTT
TAAACAGCAAGCTGCCGAACTCTAAAAGTGAATTAGATGCGGCCAGTATT
CTTGCCAACATGAATCGAATCAGCCAATCACCAGCTTGCTCAGATGAACA
GGAGAGTATCACCAGTAGTTCAGCCCCTGAAGTGATCCCTCCAACGCACA
TCAAACAACAACCATTGATCAAAGAAGAAGACAAAGAAAATGTCGAAATC
GAACAACCTGAAGAGAAGCTGAATTATTTGTTAAACCTCGGATTGGTCAT
GCATTCTCGAAAAAGAATTTTAGAGGAAGAATTTGAGAGAAAACGTTGGG
ATCGCAAATTTCGAAAATATCGTGGACGACCGAAGAAAAGATCAAAAAGA
GAGAACACCGAAGAAGGTAGTGTTAATGGTGACTTGAGACCTGGATCTGA
TCTTGATTTTTATAACGGGCCCATGACCAGGCACAAGCAACAACTCTTAC
AAGAACAAGAGAACTTACTGGAACAAATTCAAAAACAGAACAGTACAGAG
AACAATTCTGAGAACGTTCAGAGTCCAGGGGAAAACAGTAACCCTGAGAC
AAATAAAGATAATCAAAGACCCGCATCAAGAAGTAGCGGCAAGAGCAAAA
AATCTCCGCGAAACTCTCCCCGTAAAGACTCGATATCGAAAAGCTCTTCT
AATGGGGACGCGGCAGTTGAAAATAACGACAACCAAACGACAAATGTTCC
GACACCTACGGTTTTCATTAAATCGGAAGAAAACTTATCAACATCGTCAC
GAAAATCAACTCCGACTCCGACCAACCATCATGCGCCCAAAGAGTCGTCG
GTAATTGGCACCCACGACAATTCTCACCGCCAAGACGAACGACGTCAAAC
AAACGACCGCTCTGATCGCCTCATGACACTGATCAAAGATAAGGTTCACC
CTGTACCGGCCCCTTCGCCTTCATCGGCCTCGTCAAGCCACCACCGGCAT
CATCCACACCATCATCTGATGGATAAAAATCATCTTCTTCATCGACAGCC
CTCTCCACATCCCTCGTCGTCCTCTTCACATGAACATTTAAAAAGGCATT
CTTCTANGGCGGAACATGCAAGTGAGCATCGAAGGTGTCCATAAAGCACT
ACGTTCCATGTCTGATTTATAGGATTGACATTCGCTTATCTTTTTCAAGT
TTGTCCTTTTAGTTTAGTCTTTAGTCAAgttttcaatctttttattGCGT
GTAAAATCTGGGGAAANCCACCGGCATCATCCACACCATCATCTGATGGA
TAAAAATCATCTTCTTCATCGACAGCCCTCTCCACATCCCTCGTCGTCCT
CTTCACATGAACATTTAAAAAGGCATTCTTCTACATCAGCCAATAATAGC
GCGTTTAACGATCACGTGCCACGTCCTTCGTCCAATCATCACGCTTCATA
TGCTGAACACGTGGAGGAGATGAGGAAGTTGGACAGCAGTTTATTTGGTA
GACACATGgaACCGACACAAGACCATTTCGCTCGTTGGCCAGGAGTCAAT
TACATTCAACATGCATATACTTCGTATTTAAAAGGTAAAAGAACGTCGTT
TTCTCACAAAAAAAATGGTTTGGTTGTGCTCGGGCGCCGCGGGAGAGACC
TCTTGAATATAAATCTTCATTATTAGACAAGGtcttattgggctcttcca
g
Run BLAST on NCBI

transcript from alignment at sc0000144:138697..154669+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012380 ID=TCONS_00012380|Name=TCONS_00012380|organism=Clytia hemisphaerica|type=transcript|length=15973bp|location=Sequence derived from alignment at sc0000144:138697..154669+ (Clytia hemisphaerica)
ATTCACTATGTTTCATTCCTATGATCACTTTCCCCAAAAGAAAATGGCTT
TTGAAAGTCTATATTTGGTGAGATGTTATTACTGCGATTCTTTATTTCTC
CCTCTCAGCCAGAGTTGAAAACAATGAATGACTTTTGATCTTGCCATCAA
AACTAGTTCAACTACCCTTTAATGCATTCTACGCAATTTTACTGAAGTTG
AAATTTTAGTCTCGCTCTCACTCACTCATCCTTTTCTACTTTCCCTCata
ccaaaatttttcaaatctatgaataaataagatttttgaagccgaaattc
ttttttttaatgctAGTTTCGTCCCATGCTTCGTGATCAAAATAGCCAAG
ACTTTAATATGTTTTCTTTTGGTCTAGTTTTAATTGAtgcctttttcttt
cttcttcgtGGACAGGATCAAAGGCCATCAATAGGATTGGTTCATCCACA
ACCGCAACGAAAACATCGAGACGAGGtatgtcaagaatattttcccTTTT
CTTTAGTTTGTAGAATTTCTGCATCATGTAGANTTTCAAATCTATGAATA
AATAAGAGTTTTGAAgccgaaattcttttttttaatgctAGTTTCGTCCC
ATGCTTCGTGATCAAAATAGCCAAGACTTTAATATGTTTTCTTTTGGTCT
AGTTTTAATTGAtgcctttttctttcttcttcgtGGACAGGATCAAAGGC
CATCAATAGGATTGGTTCATCCACAACCGCAACGAAAACATCGAGACGAG
GtatgtcaagaatattttcccTTTTCTTTAGTTTGTAGAATTTCTGCATC
ATGTAGATGTGAGGCTTTTTTGTCTTATGAATTCACCAGACTTCATCGTA
GAACTTTTCACTAAAACTGTGATTACAGAAACAACAAGGATATACAAAAG
TCGAGCTTAGATGGGATACACTGCTAGTTTGACCCTGAGTTACAGTTACA
GAATATCATCATAACAGTTTATTTTTCCAAAGCGGAAATAACGCTTACTT
AATGTTTACTGCTAAACATTTCACCAGatgaaataatgaaatcatgACAT
GTTTGTTGACTTGAAAGTATCGTCTGATAACAAACTGTGTTTCATTTAAC
AAAAGAAGCAAGCACTTTATGATGGCAGAATGACTGTCAAGGTTTTTTAT
GTTACAATTGGAATCAAGAACATTGCGTGGCTAGTTCTTCAACAGAGCAT
GATCTTAGTTGTACCTAATAACGTGCCTTGTGCAGGACGTATTACTTATG
TTTCTTATACAAAATAGTCGCTAAGTGATGAAGTGTCCTTGGTGAtataa
cgttttttttattgttgCTTTTTTACATCACTGCACCACCGTAATACATT
ATTGTTTACAGAATCAACATTGAGAAACGTACAAACATACCTCTTTTCAT
TTCTCTACGTCTACTGACAACTGACAGCTGGCTTATGATGATACATTATA
TAGTGTTTGGTTACTGTTAGCAAGTGTATGtatcttaactttttgatgAC
GAAGGAGAGACTGAAGTTTGGTAAACCTGCAATATTGACACGGAAAGTAG
AGGCCGGTAAAAGCATGGGAATAGTCTTTGGTTGATCAGATTTGAGCACT
TTTTAGGTCAAAACTTTCCTCTTACGAAAGCTTTGGAGGCTTCAATTTGT
AGAACTAACAATGGAGCTATCTTTCAAatcagtggcgtggtggcaggggg
ggaccagcccccccccagcggagcccttttgagaaggggcgcccaaaaat
aagggacgccaagaaggatttttcaggcgcccatatcgaaagattgacaa
atgaaaaaacaaaaatggcgcccctcatcaactcaaaattttctggctcg
cttcgctcgaacactcccttttttgtgttcataatgagcgtatagagaga
agcgccaaaaacaaaaaatctttaaaaagggcgccatatttgccttggcc
accccagagaaattttaCCACCACGCCACTGTTTCAAATGCAAACCATAT
GAACAACGTAAATTCAGTGCGCAATATGATAAGATGATCTCTACGTTAAT
TGCAACTTAATGCTCTACGGTTTGCAGCAATATATCATGACAGACTTGTG
TATGAACAATTGTTCAGTATTGAGAAGGTTCGAACCTAACTGAAACTTAA
AAAAGTTGTCTCCTGTACCATTTGCGATTCCGTCAGGCTCTTGCTTCACC
GCAACTGATAGCATAACCAGCTTATTATGCAATGACCCCTGTTTTCAACA
ATGAACCAATCACATGGCGATTATGCGACTGTTAAGCTTTTCTAATCTCT
GACAAAATAAAGTAACCATTAAAACTTTattatgttatctttttatatGT
ATGTATATTCTTTTACAATGATTTTTATCAGCTTGCCTCTTATAAGAATC
ATGGTACTTTCGAAATGTACCAACTCGGAGATGTCTTTtgggattttgaa
atttttaaaattagtGAAGATGTTAAGAATATAATTTCAACGTGTTCTTA
CTGAAACTTGGCTTACACTTTATccattttcgcaaatttttcaGTCAAAG
AGGTCAATTCTATTGTTTGAAATTCTTATGAAAGACTTGGTGATTTGTCA
ATCAAAACGAAACACACATCGAGGTCAGGTTGTAATCAACCCTTAATGTT
ATCACATACATACATTTACATGCTAACAAAGAGAGAAAAGAAAACCATTT
ACTAATTTCTTATAAAAGGCTTATATGTCAGTCATCATCGAGTTTTGCTG
GTTTTCTCTTGAAAAGCTCttagacaaaatttgacaatGATCTTTAATCA
GAAAattgttgtgtcaacttgtagtagttaaaatttggttatgtgatgaa
agtttttcatttgtagTTTTTGGTTAAGTCTTCCGAAGATATGgttgtca
ttttttaattttgatttcatttgcTTAGCCATTAAAACTTTAGATTTGGC
ATGATATCTTCCTCCTGCAAGAATCTTCTTCTTAATCTTTTATCCTCGAA
GCTCTTATTTAATCACTCCTGATAAATGAATGTGTGTAGCTCTATATTTC
TGGCTTGATTGAGATATCACATTGTATGTCATTTTACTGTATTTCGTTTT
GAGGAGAGGTTTTGTCATCTTGGGTTCCATTTGAGGTCTTCTAATACATT
ATAACGATAAAGAAAGATTTCGTGAATTTCGTAGCACGAATCAGGAAGAA
GGAACCCTGTTCATTCTCCGATTGAGATGAGATGAGGGAAAGTGATAGTT
TATTGTATCATTATCGATAATCAAGTCATATCAATGTTACCTGTGACCCT
TtcctttctttataagaacatatattCTTTTAGCTCTCACTTTATGGTTC
TTACAATCTGAGAACAAGTTTGTACCAGAGATGCATATTCAGTGTCTTTA
CAACGGGCATTGCTTTTCCTTGACATGTTGAGTTCGGTGAAGAATAGCTG
TTATAGTTTGATACGAAGAACGAATGAATGTGAATAAATGAGTTTTTCTT
ACAACGGTCTGCTTGTTTTGCACATCCAGTGTGTTCTGTTACAAtcaatt
aatttttcaatcGCCGGGAAATTAACATTTTAATTGCTTAGTAATTATAC
GATATAAATGTGATACGTTTTCGAAATTGGTTCTGTTAATTATGTTCTAT
AGACTTGTCTTCTCTCTTCGCCTTTTCATTGTGATGAATGCAAGGTCGTT
TTCGCCATGGTGCGTTGTTTTTTCTTCGGGTGTAGCTtctcactgaaaaa
tttgaaaattcgtaATGGAGAACTATGTATGCTATCTGGATAAAAAGTTA
TAGTCAAAAcagtttcatcgattttttcaGGGTAATGAATGGATCATGTA
TTAACCACGCTAAAACGTTATTTGAAATGTCATTCTTCCTTTTCCAGTAA
GACAGGAAAGGGTTGTGATTTTAGGGTAGTGGgtccaaaatatattttgt
ctGGTCGGGAGGCTGAAAGATACATGAGATTCTTTATTTCAATTATACTA
CTTGATACAACTGCTTAACTGATTAATGAGAGATGGCAGTTCATTGTGTT
CTTCAAATTTTAGCCTTTTTTGTTTTACATAAAACNTCCTCCTGCAAGAA
TCTTCTTCTTAATCTTTTATCCTCGAAGCTCTTATTTAATCACTCCTGAT
AAATGAATGTGTGTAGCTCTATATTTCTGGCTTGATTGAGATATCACATT
GTATGTCATTTTACTGTATTTCGTTTTGAGGAGAGGTTTTGTCATCTTGG
GTTCCATTTGAGGTCTTCTAATACATTATAACGATAAAGAAAGATTTCGT
GAATTTCGTAGCACGAATCAGGAAGAAGGAACCCTGTTCATTCTCCGATT
GAGATGAGATGAGGGAAAGTGATAGTTTATTGTATCATTATCGATAATCA
AGTCATATCAATGTTACCTGTGACCCTTtcctttctttataagaacatat
attCTTTTAGCTCTCACTTTATGGTTCTTACAATCTGAGAACAAGTTTGT
ACCAGAGATGCATATTCAGTGTCTTTACAACGGGCATTGCTTTTCCTTGA
CATGTTGAGTTCGGTGAAGAATAGCTGTTATAGTTTGATACGAAGAACGA
ATGAATGTGAATAAATGAGTTTTTCTTACAACGGTCTGCTTGTTTTGCAC
ATCCAGTGTGTTCTGTTACAAtcaattaatttttcaatcGCCGGGAAATT
AACATTTTAATTGCTTAGTAATTATACGATATAAATGTGATACGTTTTCG
AAATTGTTTCTGTTAATTATCTTCTATAGACTTGTCTTCTCTCTTCACCT
TTTCATTGTGATGAATGCAAGGTCGTTTTCGCCATGGTGCGTTGTTTTTT
CTTCGGGTGTAGCTTttgactgaaaaatttgaaaattcgtaATGGAGATC
TATGTATGCTATCTGGATAAAAAGTTATAGTCAAAAcagtttcatcaatt
tttttcagggTAATGAATGGATCATGTATTAACCACGCTAAAACGTTATT
TGAAATGCCATTCTTCCATTTCCAGTAAGACAGGAAAGGGTTGTGATTTT
AGGGTAATGGgtccaaaatatattttgtctGGTCGGGGGCTGAAAGATAC
ATAAGATTCTTTGCTTCAATTATACTACTTGATACAAATGCATAACTGAT
TAATGAGAAATGATACTTCATTGTGTTCTtcattctttcaaattttagcc
TTTTTTGTTTTACATGTTATAAACATTTGATGTTTTTGTCTGGTTGCTTT
GATGATGATTTCATCCTTTAACAACACTAAAATATACATGCTTTGAAACG
TTCATTGTATGGTAATTGTATCCTTGCTTTAATAATAGTTATGTTTTTAT
CTGGAGATACGGTGCTTTTGAATTAAGATTTTTGTCGTTTCGCTTTGGTG
CTTTGTGTAGTTGAGATGCAGACCCTGTCATTGTATTTTGTCACTGCGTT
GCCTCTAGGGATTTTAGGAAGTCAAAGATAAGTAAGGATGACTTTATACG
TTTTGTTCAAGAAGTGTAAGCAATAATAGAATAAGCTTGCGTGCAAGTTT
ATGAATGGTTGCTCCCGAATGGTTACTCGTTGCTCCTTTGGATCATGGGA
TTGGTCATCTTTCCATAAAGTTACCAGCTTCAATATAAAGACAGCTAATT
ACGTCTATCGCCATatagaaatcaaaaaatagGAAACTGCATGAATCAAA
TGTTTTCCTTCCCATTTAAAACCTAACTGAATGATGTGAATGGTGTTGAA
GGATTTTCGATTGACCACAGAGCTGAATGGAACATACATCTCCTCACATT
CTTGTGCatctttttgtttcattttgattcATTTCGGGCCCATTGAAACA
CTTGTAATTATTTATCAATTGATGAATAAATCATGCAGAGTAGGAAGAAT
TTTTGTCAACTATAGAAAGGTTAGTTCAAAAagaaaacaccaaaatataG
ATTCTGGAGATTTGTGGCCCTCGTtgtttccatagaaaacaaTGGTATAT
ATTTGTGTGGTGGGAAGTTTCACTGTATTGGAAGCATTTACTTTAGAGAC
CATTGAAGGTTTGACTTCAAAGCCCCAATGTGTCTGAATTGATAGGCGTT
CTCCTTTGCGTTCGAATCGGTAGATaatgtattttgaaatttcgctATCA
AGTTTTTGGTTGTGAGGATTTTAAGAAAAGAAAGTGAATCTACTTCCTCC
CATTTCTTcgtaaaagaaaatttatttggaCATTTTCTCACATGGCAGTC
TATTCCTCCCAAATAGTCTCCAAGATTGTGAATATTACTCTTCGTCTAAG
GACAATCAAAATCACATACTTAATTGGTTATCAATGGCAACTCTCGAAAA
CAGGTCATTATGTCTAATTACTTTGAAAGCAATACTGTATGTACATCGTT
TGCTTaaatttggaaaacatttttaggcgaaaattcaaaaagttaagaac
atccgagggcttaaaaaattttggaagttgttataaaattttttggaggt
tttatattttattctttGAACCTTGTACCAATTGTGTATTGTAAGTAGTT
GGTGATTGTAATTGTTTCCAGTTTATAAAACAAGACAAGAAAAGTCTTTG
GGTATTCAGTGTACTGTATGTGGTAAATTGGTTTCCAAACTACAAACTTT
GCGCTTCTTCCCACTATCAAACAGGTCCTCGATATTCAAATGCCAAATTC
AGAAAGCCTTTTGAGTGTGAGGAGTGTGCTTTTCTTGGAGCACTGTTTTT
GAGTACCACAAACTTGACACTTCCCTTCAAACAGTTTGATATCTATCTGT
GTTATGATTTGGATAAAACGTACTTGTGATGAATACACGTGTGTTTGATG
GAACATTTATTCAAAACATTCCCTTCTCATCAATATTTACTTACTTTTTT
AAGAAGTcttaattctttattttttcatcatcacatatttacatttttga
tttcatttttttcaacaaattttttccTCCTTTACTTTACAACGTTTCAT
GTTCGTCCATTTTCTTTATTGAGTTCTtgatttatcttttcttttctttc
tttgttgttGTGTGTGTGAAGATCTTATGGTTTTCGTCTTCTTTCTTCCC
CTTTTCATCCTTCGACCTCATCGTTAGATATTATGTTTACTTGGAACAAC
CAATTTTCCACGTCCTGGGGTTATCATGGCGATTCTTGGTGACGGTTCTG
ACCAACTACAGAATAACAGGAAACTATTTGAAATAGAATTTGTATAAAAC
TATACAgagatatttttttcttctcttcttaGTTTAAAATTGACGTATTG
GTTTTAGCGAGTAAATTCCTTTTGGGGTAAATTTTGGACCCATTTTCCAT
ATATGCTGGTTGTTTACTGATTTGAATTCCTTTTGCGCATAAAAGGAGTT
CTGGAAACGATCTATTGCAAACacatcaaaattaaagtgaataaacagta
cacgcttttttttataagaatggtgtttttcatttcatcatggatattct
taactttttggcgaaaatattcttacgctattcttaggttaagatcgaaa
ttggcaatctacaggttaaaatgcattaaaaatggcattcttaggttcag
ttgctaaacttcatgatggtgatattcttatcatattcttaatttttcgg
ccattttcatcatggacattcttatgaagtttattcttataaaaaaaaaa
agcgtgtatgtggAACATGGTTTTCGTGTACTGTACTTCACACATGTAGA
ATTAGGGCTTTTAGTTCGTTTCATGTCATTTTGGTGTCAAGAAATGACGA
GCACAAAGTTCGTTCTTTATCATCGCATACAGTAGATCATGTTTATTATA
CAATGGCTCAACATCTTCTCTTGAACGTTCAGTTTTATTAGTTATGATAA
TGTAGATCATAATTGCATCAGTTTTGTTTAATTCCTTTATGTCAAATAGA
TTAATGCACTTATGTAGACACACACATCACTTGCTTTGCCTGCCCAATAG
CTCTCTTTCTCTTGTCCACAACAGCTTGTAAAGATAAGTGTATTACAAAG
TTATAATTAGGAAATTGAagctttttttctcttttcagaacattttttat
atacattttgAAGTAATTTAAACAACAGCAGAGGGGTATTATCTGATTTT
TATAGTTCCATTTCTAAAACTGGATGGATAAACTTATGGTAGgggagaaa
ataaaaattaatatcacaaagaaacattttaaagaaagagaagatatAGA
ATAGAGGTTTGGAAAAAGGGTTGACTAGCTGAGAGAAACCTTAAACACTG
TTTTTATGTCGAAGGgttttttttctatgaaatatTATTAGTAAGGGtac
aaaattgattaaaaaaagaaatgagcttaaaatgttattactagaagtga
aaaaaaatccaacaagCTGAGAATTGACTGCGAGAGACTGTTGGTTGGAG
GTGGATTCTTTTTAGTAATGATTTATGTCATGCTTAGATAGTTTATATCA
TCTTACAAGTTTGAGTGTGATGGCGATATATAcatttatcggcgatccaa
aaaatatctgcaatctgattggttaaaaagagtacaatatatcNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNg
tcaccgataaaccagttatcagacatttgctcgtacaatatggaaatatt
ttactcgttccgtattttccgtatattttcctcgcctaaaggctcggata
TGACATGACATGCTTAGATAGTTTATATCATTTTACAAGTTTGAGTGTGA
TGGCGATATATACATATATTGTAAAAAGACCTAGTGATACatgtcttaaa
ctcatttattGGCTGATGTTTGGTTTTATGAAGTTtcctttaaagaaaat
ttggGCTTCCCTTATTCGATCATATTAGTAGTATTGATGGTTCATTGACG
GAAAGAATAATATATCTAGCAATACTCTTGCAATTATACTAGTAACAAGG
CTAGTATAGCTTAAATTCACTGTAAAGTCACTTTCTCTTTGAGCAGGTTT
AGTACGTCGTTAAAAAATCGATCTAATAGTAGAACGTCCAGTGAAAGATT
TATAAACGTTGTCATCTTACATCACAAGCAAGTGATCAGGGAATGAATGA
CGTGATAACTTGAATTTACATTGCATTATTCAGTTAACTCAATCGTTGAT
CGGACTTTTCTTTGAGTGAGAATGTTTTTCGTTCTGAAAGAGTGACTCAA
AGAAATCGAGTTACGCGAAAATCTAGCTGTAAACTTCCTATCGcaatcga
atttttttttgaagttacTATGTGTTTATCTTGTTTGCATCTCGAGTCAA
AAGACAACAAACAAAGCCCTCTTTTGACTGTAATCTAAGAATGGCTAAAA
AATGTCCTATTTTCTCCCCAATGTTTATCTTTGACACTTGTATAGCGAGT
ACATAACATTTCAGGACTCTCAAAACACACTCTAAAATGATATATCCTCC
TTCATTTCAAACCTCCTATGAAAATAAATATTGCCACGACCAAGTTGCTT
TCGATATAAGAATCGAAAATGGTTGAAACTATGGTAGTCGATACACCATT
TTCAGTATATACTGTATGATCCTTTATAGAAGCTTCTTATTGTTTGCCAG
ACAAAATAACAGTACAGCACGGAATGTCAGATTGAAAtattaatattttt
tgtaaCAGTACACCATACCACATGAAAtcttatttgaaaacattaatcCA
TGTGTATTTCAAGAGATATTATGAAGTCAGaatgtgtgcttataaaaaaa
gttttattttacgTTATGTTGATTTAAGATtgagtttgttgttgtttttt
ggtttctaaaaattctcTTACTTCTTTACAAATTTTAATCGATGCGTTTC
TAAGTGGATTTTCTTGTAATTTGTGTCTCTGTGAATGGGTTTGTAGTATC
AATCGCTCTGTGACTGTGTGCTGAGTTCTATGAAAAATCAAGTCTTTCTT
TTGAGGTTCTGAAGTCTCATAAGACAGTTTTTGATTTGGTTTAGCTGACT
TTTCTGAAGTGCTTGATTTTAGGTCtgttttgtgaatattttaaTTTGNC
TGACTTTTCTGAAGTGCTTGATTTTAGGTCTGTTTTGCGAATATTTTAAT
TTAAGTAATTAAACACTCCTCGTTCGGATCTCAACGATCACTAAATCTCG
ATTCATTTCAACTCCAGCAACACTGTCTAACTTCAAGGAACTTAAACTTT
AAATTTGTCATCTTCTATTATCCATAGGAAATAGTAAAATCAAGTCAATC
GATGAATTCGCTTCATTTCTCACCACGTGACTCGGTCACAGTCCACTCGC
TATCACCCACCGAGCTTTCACGTTATGGCTCCTCTTACCCTCCTGGTAGA
GGACACGTGCATGGACCCCAGACCTCATGCCCCGTACACGGTCAAGAATC
AAGTCATCCCCACGATGAACGAAATGGCCGTCCGCCAAACCTTCCGTTCG
ATGCGCCGCACGGCTTCCATGGGTTACACGGGCCGCATCCTCGTTTTCGT
GAAGACATTTACATGAGACGACATTCATTAGATGTAAGTTTTCGTTGTTT
TCCTCACTTTTAGATCAGTCCTTCTTTCTTTTAATATAAACTTGGACATG
TATGATACTATTTTACAAGCCTTCGTATTGAGAAGATTCGATACACAAAG
GTTGCCAATATGAATAGATTACTGAAACTGTGATTAGTAAATAAACATTG
TTTCTTACTACATACTGTGATGCATCTGGCAATCCAGATGCTCCTTTATC
GATCTCAACTGAAtgtataacttttgttttcattcctTTCCAGCGTAAAG
AGCATTTACCGCCCCCACCCCATCACGCCTTAGAAGAAGACTTGCGAAGA
AGAGGAATGGATTTTAGAGGTTTTGCTGGTTTACCGCCCCATCTCTTGGA
TGAGCAATACAGGCGTCATTTGTTGAATGGAACGCATGAACACCCTCCAC
CCTTCAAAGTAAGTCtaaattactttttctttagaagttttgcttAACAA
AAATGAATGAACTTAATTATATAACTATTTAATAAAACAATcgaaaaagt
tatatttttccgGTTTTCTTCACTAGGAACCAGGACATGGACAAGTCTTT
GTTCCACCGCATTTCTATTACGGTCGTGAATATCCGCTCCCGGTTGACCC
CTACCATCCGCACGCGTTATCCGCAGCGCCGAGTGAACTTCTTCACAGAT
ACGGAGGTGCACCTCCACCGGTCAGTCCCAGGCTACTAGAAGCCTATCGA
CGTAATGAGCATGGTGTTTTGAGCTCGCGCGAATTCGAAGCGGCCGAGCG
ACGATATGAAGAACGCCGGGAGAGTGCTGACCAAAAAGAAAGTGTTATTC
GACCAGCTTCTATCGATCTCTACCGCAAGAAGAGTGCAGAAAATCATATG
CACGGTAAGAGAATCCTCTTTTTTTTCGAATGTCTTGTTTAGATTTCTAT
TTTCGTTTTCTCAAGTGCAAGTCAAGATGTACAATTGTTTTCAAGATGGT
TGTGAAAAACCTTTCGAACTATCCAATTGAAACAtggatttttatgtttt
cagaTCGTCGTAAACACAGTATTTCACTGGACAAGAAACCAGTCGTCCAC
GAAAAAGAGGAACCACCTCGAATGGTATGTTTTTTTAATCTCACTTGTAT
TGGCATCATAAAAGTATAACGAGTCTGGTTGGAAGGTTGTGGTGATGATT
GTGACTATGATTTCGAGAGCTTTTCACTGCCCAAAATGTGTTTTTACCAG
ATCTCTCACCGAGTGTTGGCATATGATGTTTGTGTCCTTTTGCGAGATTT
TGGTGAAGATTTTAAATCATGGCTCGCAGTTGATGATGAGTTCTCTCAAA
CAGGAATTGTTAAAAAAGTTCTCGTTTTCTCTATTTTTCGTAGAAGATGC
CCATTTTCAAAGGTTTGGAATGTAACAATAACAACATCAAACCACACCCT
AAACAAAATGGTAAACCACATGATTTTTATCGCAACCCTTGAGTCAAATA
ATATTTTACACAAGATAGCATATATTTAATGTGTATGTGAATTGGAACAC
TTTCTTTGTTAGTCTTTGAACGGAGTATTGACAAGATGGGTCACTATACC
TAACTACTGTATGATATTCTCTTTCCTTCTATATAGCTATTCCTTGCAAc
gattgaaattcttttttcttatcCAAGGTACATCACATCAAGCCAACTCC
ATCACCTCGCTTTTAAACAGCAAGCTGCCGAACTCTAAAAGTGAATTAGA
TGCGGCCAGTATTCTTGCCAACATGAATCGAATCAGCCAATCACCAGCTT
GCTCAGATGAACAGGAGAGTATCACCAGTAGTTCAGCCCCTGAAGTGATC
CCTCCAACGCACATCAAACAACAACCATTGATCAAAGAAGAAGACAAAGA
AAATGTCGAAATCGAACAACCTGAAGAGGTATAATTTCCTCATGTCTTCT
TATCAGAAGATTTGACATTTAATAAAGAGTCTAATACGGAAGAGCGTAGA
GAAAACTTCATATGCTAATTAAGAGAATCTGGTGGTTGCAAGGCACGCTG
TAGATACAAAGCCCTTTAAATTTCACATTGCNACGGTAAGAGAATCCTCT
TTTTTTTCGAATGTCTTGTTTAGATTTCTATTTTCGTTTTCTCAAGTGCA
AGTCAAGATGTACAATTGTTTTCAAGATGGTTGTGAAAAACCTTTCGAAC
TATCCAATTGAAACAtggatttttatgttttcagaTCGTCGTAAACACAG
TATTTCACTGGACAAGAAACCAGTCGTCCACGAAAAAGAGGAACCACCTC
GAATGGTATGTTTTTTTAATCTCACTTGTATTGGCATCATAAAAGTATAA
CGAGTCTGGTTGGAAGGTTGTGGTGATGATTGTGACTATGATTTCGAGAG
CTTTTCACTGCCCAAAATGTGTTTTTACCAGATCTCTCACCGAGTGTTGG
CATATGATGTTTGTGTCCTTTTGCGAGATTTTGGTGAAGATTTTAAATCA
TGGCTCGCAGTTGATGATGAGTTCTCTCAAACAGGAATTGTTAAAAAAGT
TCTCGTTTTCTCTATTTTTCGTAGAAGATGCCCATTTTCAAAGGTTTGGA
ATGTAACAATAACAACATCAAACCACACCCTAAACAAAATGGTAAACCAC
ATGATTTTTATCGCAACCCTTGAGTCAAATAATATTTTACACAAGATAGC
ATATATTTAATGTGTATGTGAATTGGAACACTTTCTTTGTTAGTCTTTGA
ACGGAGTATTGACAAGATGGGTCACTATACCTAACTACTGTATGATATTC
TCTTTCCTTCTATATAGCTATTCCTTGCAAcgattgaaattcttttttct
tatcCAAGGTACATCACATCAAGCCAACTCCATCACCTCGCTTTTAAACA
GCAAGCTGCCGAACTCTAAAAGTGAATTAGATGCGGCCAGTATTCTTGCC
AACATGAATCGAATCAGCCAATCACCAGCTTGCTCAGATGAACAGGAGAG
TATCACCAGTAGTTCAGCCCCTGAAGTGATCCCTCCAACGCACATCAAAC
AACAACCATTGATCAAAGAAGAAGACAAAGAAAATGTCGAAATCGAACAA
CCTGAAGAGGTATAATTTCCTCATGTCTTCTTATCAGAAGATTTGACATT
TAATAAAGAGTCTAATACGGAAGAGCGTAGAGAAAACTTCATATGCTAAT
TAAGAGAATCTGGTGGTTGCAAGGCACGCTGTAGATACAAAGCCCTTTAA
ATTTCACATTGCCATTGCTCTCCtaatcaaaaacttttgttttactTTAC
AGAAGCTGAATTATTTGTTAAACCTCGGATTGGTCATGCATTCTCGAAAA
AGAAGTAAGTTCTCTCTCCTCTTTTGTTAGATTCGTAGTCGAACTGGAAT
TTATTAGCGAATATTAACTAAGGTGGTTTCTTCTTACTTTCTTCATTTCA
ttaattttcatatttatttAGTTTTAGAGGAAGAATTTGAGAGAAAACGT
TGGGATCGCAAATTTCGAAAATATCGTGGACGACCGAAGAAAAGATCAAA
AAGAGAGGTGTGTTGTCTTTGTTGGTATTTTTAGGGATTTTGACAGCTCT
TTTGAAACGTTGCATAACACAAATTCAGAGTGAAAAGAACTAGCGATAGA
TCCATTTCAATCTCATTTTTCCTAAATCTGTAGTTATGACTTTGAAATCC
ATTTAAACaatttaatatttatgttttctAGAACACCGAAGAAGGTAGTG
TTAATGGTGACTTGAGACCTGGATCTGATCTTGATTTTTATAACGGGCCC
ATGACCAGGCACAAGCAACAACTCTTACAAGAACAAGAGAACTTACTGGA
ACAAATTCAAAAACAGAACAGTACAGAGAACAATTCTGAGAACGTTCAGA
GTCCAGGGGAAAACAGTAACCCTGAGACAAATAAAGATAATCAAAGACCC
GCATCAAGAAGTAGCGGCAAGAGCAAAAAATCTCCGCGAAACTCTCCCCG
TAAAGACTCGATATCGAAAAGCTCTTCTAATGGGGACGCGGCAGTTGAAA
ATAACGACAACCAAACGACAAATGTTCCGACACCTACGGTTTTCATTAAA
TCGGAAGAAAACTTATCAACATCGTCACGAAAATCAACTCCGACTCCGAC
CAACCATCATGCGCCCAAAGAGTCGTCGGTAATTGGCACCCACGACAATT
CTCACCGCCAAGACGAACGACGTCAAACAAACGACCGCTCTGATCGCCTC
ATGACACTGATCAAAGATAAGGTTCACCCTGTACCGGCCCCTTCGCCTTC
ATCGGCCTCGTCAAGCCACCACCGGCATCATCCACACCATCATCTGATGG
ATAAAAATCATCTTCTTCATCGACAGCCCTCTCCACATCCCTCGTCGTCC
TCTTCACATGAACATTTAAAAAGGCATTCTTCTANGGCGGAACATGCAAG
TGAGCATCGAAGGTGTCCATAAAGCACTACGTTCCATGTCTGATTTATAG
GATTGACATTCGCTTATCTTTTTCAAGTTTGTCCTTTTAGTTTAGTCTTT
AGTCAAgttttcaatctttttattGCGTGTAAAATCTGGGGAAANCCACC
GGCATCATCCACACCATCATCTGATGGATAAAAATCATCTTCTTCATCGA
CAGCCCTCTCCACATCCCTCGTCGTCCTCTTCACATGAACATTTAAAAAG
GCATTCTTCTACATCAGCCAATAATAGCGCGTTTAACGATCACGTGCCAC
GTCCTTCGTCCAATCATCACGCTTCATATGCTGAACACGTGGAGGAGATG
AGGAAGTTGGACAGCAGTTTATTTGGTAGACACATGGTAAGCCTATTCAA
TTCATAAATTCTAGTAACTGACGAGAGCCTTTTTCTGGTCAATCTGCTAG
GATTGTTTTTCACTAAGTAAAGTTTTCGTCGAGCGGTCAGTAGTTGAATG
AGTGAAATGACTCATGAATCATTGGTGATACGGTTAAAAATAAGGGTTTC
TCTCACgtgaatattttttcattttattaggaACCGACACAAGACCATTT
CGCTCGTTGGCCAGGAGTCAATTACATTCAACATGCATATACTTCGTATT
TAAAAGGTAAAAGAACGTCGTTTTCTCACAAAAAAAATGGTTTGGTTGTG
CTCGGGCGCCGCGGGAGAGACCTCTTGAATATAAATCTTCATTATTAGAC
AAGGtcttattgggctcttccag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006961XLOC_006961Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012380-exon-sc0000144-1491911889:138697..138763TCONS_00012380-exon-sc0000144-1491911889:138697..138763Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:138697..138763TCONS_00012380-exon-sc0000144-1510915933:138697..138763Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:138697..138763TCONS_00012380-exon-sc0000144-1575043694:138697..138763Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:139112..139171TCONS_00012380-exon-sc0000144-1491911889:139112..139171Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:139112..139171TCONS_00012380-exon-sc0000144-1510915933:139112..139171Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:139112..139171TCONS_00012380-exon-sc0000144-1575043694:139112..139171Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:149174..149479TCONS_00012380-exon-sc0000144-1491911889:149174..149479Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:149174..149479TCONS_00012380-exon-sc0000144-1510915933:149174..149479Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:149174..149479TCONS_00012380-exon-sc0000144-1575043694:149174..149479Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:149740..149904TCONS_00012380-exon-sc0000144-1491911889:149740..149904Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:149740..149904TCONS_00012380-exon-sc0000144-1510915933:149740..149904Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:149740..149904TCONS_00012380-exon-sc0000144-1575043694:149740..149904Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:150023..150350TCONS_00012380-exon-sc0000144-1491911889:150023..150350Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:150023..150350TCONS_00012380-exon-sc0000144-1510915933:150023..150350Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:150023..150350TCONS_00012380-exon-sc0000144-1575043694:150023..150350Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:150500..150570TCONS_00012380-exon-sc0000144-1491911889:150500..150570Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:150500..150570TCONS_00012380-exon-sc0000144-1510915933:150500..150570Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:150500..150570TCONS_00012380-exon-sc0000144-1575043694:150500..150570Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:152021..152087TCONS_00012380-exon-sc0000144-1491911889:152021..152087Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:152021..152087TCONS_00012380-exon-sc0000144-1510915933:152021..152087Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:152021..152087TCONS_00012380-exon-sc0000144-1575043694:152021..152087Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:152305..152555TCONS_00012380-exon-sc0000144-1491911889:152305..152555Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:152305..152555TCONS_00012380-exon-sc0000144-1510915933:152305..152555Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:152305..152555TCONS_00012380-exon-sc0000144-1575043694:152305..152555Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:152749..152800TCONS_00012380-exon-sc0000144-1491911889:152749..152800Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:152749..152800TCONS_00012380-exon-sc0000144-1510915933:152749..152800Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:152749..152800TCONS_00012380-exon-sc0000144-1575043694:152749..152800Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:152918..153003TCONS_00012380-exon-sc0000144-1491911889:152918..153003Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:152918..153003TCONS_00012380-exon-sc0000144-1510915933:152918..153003Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:152918..153003TCONS_00012380-exon-sc0000144-1575043694:152918..153003Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:153178..154282TCONS_00012380-exon-sc0000144-1491911889:153178..154282Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:153178..154282TCONS_00012380-exon-sc0000144-1510915933:153178..154282Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:153178..154282TCONS_00012380-exon-sc0000144-1575043694:153178..154282Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1491911889:154477..154669TCONS_00012380-exon-sc0000144-1491911889:154477..154669Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1510915933:154477..154669TCONS_00012380-exon-sc0000144-1510915933:154477..154669Clytia hemisphaericaexon
TCONS_00012380-exon-sc0000144-1575043694:154477..154669TCONS_00012380-exon-sc0000144-1575043694:154477..154669Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000144supercontigsc0000144:138697..154669 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	2.88895e-07	5.42211e-10	0	1.70014e-09	0	0	0	0	0	0	0	0	0	0	0	0	0	3.0022e-07	0	7.82014e-10	0	2.13993e-10	3.09473e-08	0	0	3.74274e-10	2.64035e-08	3.87603e-07	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012380 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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