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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012348 ID=TCONS_00012348|Name=TCONS_00012348|organism=Clytia hemisphaerica|type=transcript|length=1079bp
AAGTGATTGATATTTTATGGATTTCAATCCAAAGTTGAGTGTTTTTGCCT
TGGGGCGCTCTAAAAGTTTCAGGTAACTATTTCTTGTGTGATAAATGTGT
GTCAGGGTTTTGTAGTTTAGCACGTTTGTAACGGCTTCAGGGGAAAGATT
AGATAGAGTTTGATGTACAAGttgaatattgaatttgatAACAGTATTTG
GTAAAATTGGAATTTCTAGGTTTTGAAAAAGAGGGGAAGTCTCGgcatta
aaatctgaaaaagttagaATACGCAAAcatcttttttgtaattttcctaT
TCGAGAGTTTTGAGTAAGGCCTTGTCCCCAGATAATTGTTGCGTAAGACA
TATGAGAGTGGAATATAGCACAGAATAAAGTTTTGAGAACTAGTTGTGGA
ACAAAGTGGCGTAGTTTGGACAAAATACCATTAGATCTTCTAAGCTTTGT
GGATAAATGATCAAAGTAAAAATTCCAGGCTAGAAATTCATCTAGAATGA
GACCAAGATATTTGACATGCTTTGTGAATTTTAAGACGTGTCCTTCAAGG
TAAAGATTCATAGAGTAAGGTACAGATTTATGTTTGCTTCTGAACAAAAT
GACCCCTGTTTTCGCAGTGTTAAGAGAAATTTTATTCGCACGAAGCCAAG
AAGAAAGTTTAACTAGATCAGAGTTCACTTTGGTTTCGAGTGAATTCAAA
TTTGAGTCGGACGAAAGAAGGCAGGTATCATCAGCAAAGAGGTTGGTTTC
GCTATTCAATATAGCTTGAGGAAGGTCATTTATGTAAATTAGAAAGAGTA
GTGGTCCTAATACAGAGCCCTGCAGAACTCCATGTTTAACAGTTCGTTTT
GAAGAATCGTGTCCAGAAATTGACACATATTGTTTCCTATTAGTTAAGTA
AGATCGAAACCAGAGATTTGCAATGCCTCGTATTCCATAATGCTGTAGTT
TAGATAAGAAAGTTTCATGGTCAACAGTatttgaaattgatcaaactatt
tttcacgcagttccggacgcagattgtgtttttctaaccttttctaacct
tggcacacattttgactgaatgatggaat Run BLAST on NCBI transcript from alignment at sc0000143:603084..604162 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012348 ID=TCONS_00012348|Name=TCONS_00012348|organism=Clytia hemisphaerica|type=transcript|length=1079bp|location=Sequence derived from alignment at sc0000143:603084..604162 (Clytia hemisphaerica)
attccatcattcagtcaaaatgtgtgccaaggttagaaaaggttagaaaa
acacaatctgcgtccggaactgcgtgaaaaatagtttgatcaatttcaaa
tACTGTTGACCATGAAACTTTCTTATCTAAACTACAGCATTATGGAATAC
GAGGCATTGCAAATCTCTGGTTTCGATCTTACTTAACTAATAGGAAACAA
TATGTGTCAATTTCTGGACACGATTCTTCAAAACGAACTGTTAAACATGG
AGTTCTGCAGGGCTCTGTATTAGGACCACTACTCTTTCTAATTTACATAA
ATGACCTTCCTCAAGCTATATTGAATAGCGAAACCAACCTCTTTGCTGAT
GATACCTGCCTTCTTTCGTCCGACTCAAATTTGAATTCACTCGAAACCAA
AGTGAACTCTGATCTAGTTAAACTTTCTTCTTGGCTTCGTGCGAATAAAA
TTTCTCTTAACACTGCGAAAACAGGGGTCATTTTGTTCAGAAGCAAACAT
AAATCTGTACCTTACTCTATGAATCTTTACCTTGAAGGACACGTCTTAAA
ATTCACAAAGCATGTCAAATATCTTGGTCTCATTCTAGATGAATTTCTAG
CCTGGAATTTTTACTTTGATCATTTATCCACAAAGCTTAGAAGATCTAAT
GGTATTTTGTCCAAACTACGCCACTTTGTTCCACAACTAGTTCTCAAAAC
TTTATTCTGTGCTATATTCCACTCTCATATGTCTTACGCAACAATTATCT
GGGGACAAGGCCTTACTCAAAACTCTCGAAtaggaaaattacaaaaaaga
tgTTTGCGTATtctaactttttcagattttaatgcCGAGACTTCCCCTCT
TTTTCAAAACCTAGAAATTCCAATTTTACCAAATACTGTTatcaaattca
atattcaaCTTGTACATCAAACTCTATCTAATCTTTCCCCTGAAGCCGTT
ACAAACGTGCTAAACTACAAAACCCTGACACACATTTATCACACAAGAAA
TAGTTACCTGAAACTTTTAGAGCGCCCCAAGGCAAAAACACTCAACTTTG
GATTGAAATCCATAAAATATCAATCACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012348-exon-sc0000143-1491911889:603084..604162 | TCONS_00012348-exon-sc0000143-1491911889:603084..604162 | Clytia hemisphaerica | exon |
| TCONS_00012348-exon-sc0000143-1510915933:603084..604162 | TCONS_00012348-exon-sc0000143-1510915933:603084..604162 | Clytia hemisphaerica | exon |
| TCONS_00012348-exon-sc0000143-1575043694:603084..604162 | TCONS_00012348-exon-sc0000143-1575043694:603084..604162 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000143 | supercontig | sc0000143:603084..604162 . |
Blast
The following BLAST results are available for this feature:
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