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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012303 ID=TCONS_00012303|Name=TCONS_00012303|organism=Clytia hemisphaerica|type=transcript|length=494bp
GACCTTGCAAGGCAAAGAAAGTTCAATGCTGGTCAAATGTATGTTACTAT
GAGCAgagtgaaaaatttaaatggtttGTACTTTACTGGTCAATATCGAC
GTAGTGCTTTTGTCTGTAGTTATAAAGTTAGTGAAGAATATACACGATTG
CGTCAGAACAAAGTTGAAAGAGTTGCAGATATTATGAGGAGACTTCAACA
TGGACGGATTTGAAATGGAGCATGATCAATTGTTGACTGACATTCTTCAA
GATTATGATTTAGTTCCGAACTTTCCAACACATATCGATGGGAAAATGCT
TGATCAAATTTGGACACATAAGGAATTGGTACACGAGTATAGTATTGAAG
TTATTCGTAAATGTGTGAACTTATCCGATCATGATGGAATCAAATTATCG
CTGACTTTGCTAGCTTAGAATACCCGTCAGAGGCGATTCCCGGCGGGACa
agggggggttggaaactgGGGTGGTGGATGATCTAAACTTTCTT Run BLAST on NCBI transcript from alignment at sc0000143:614253..615306+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012303 ID=TCONS_00012303|Name=TCONS_00012303|organism=Clytia hemisphaerica|type=transcript|length=1054bp|location=Sequence derived from alignment at sc0000143:614253..615306+ (Clytia hemisphaerica)
GACCTTGCAAGGCAAAGAAAGTTCAATGCTGGTCAAATGTATGTTACTAT
GAGCAgagtgaaaaatttaaatggtttGTACTTTACTGGTCAATATCGAC
GTAGTGCTTTTGTCTGTAGTTATAAAGTTAGTGAAGAATATACACGATTG
CGTCAGAACAAAGTTGAAAGAGTTGCAGATATTATGAGGTGCAGTTCTAA
TTTAAATGTTTGCCTAAATGTTTGCCTATTGAATGTAAGATCTTTAAAAC
GACATGCAGTTGATATTCAAAaggacagatttttgtatgaaaatgatttg
ttatGTCTGACAGAGACACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GTCATTCTCCTTCTTTTATTGACATTGATGAGTATGATCATTCATCATGC
TTTTCTcttgtaaaatttagaaaagctgaatttactgaaaaggaattttg
tgttttgtttctcTATAAAAGTTCAAGAATTCAACGTGATGTGTTCTGTT
ACAATCTTGCTCAATTTATTGAAAGATATACAATTGATATCATTTTAGGA
GACTTCAACATGGACGGATTTGAAATGGAGCATGATCAATTGTTGACTGA
CATTCTTCAAGATTATGATTTAGTTCCGAACTTTCCAACACATATCGATG
GGAAAATGCTTGATCAAATTTGGACACATAAGGAATTGGTACACGAGTAT
AGTATTGAAGTTATTCGTAAATGTGTGAACTTATCCGATCATGATGGAAT
CAAATTATCGCTGACTTTGCTAGCTTAGAATACCCGTCAGAGGCGATTCC
CGGCGGGACaagggggggttggaaactgGGGTGGTGGATGATCTAAACTT
TCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012303-exon-sc0000143-1491911889:614253..614440 | TCONS_00012303-exon-sc0000143-1491911889:614253..614440 | Clytia hemisphaerica | exon |
| TCONS_00012303-exon-sc0000143-1510915933:614253..614440 | TCONS_00012303-exon-sc0000143-1510915933:614253..614440 | Clytia hemisphaerica | exon |
| TCONS_00012303-exon-sc0000143-1575043694:614253..614440 | TCONS_00012303-exon-sc0000143-1575043694:614253..614440 | Clytia hemisphaerica | exon |
| TCONS_00012303-exon-sc0000143-1491911889:615001..615306 | TCONS_00012303-exon-sc0000143-1491911889:615001..615306 | Clytia hemisphaerica | exon |
| TCONS_00012303-exon-sc0000143-1510915933:615001..615306 | TCONS_00012303-exon-sc0000143-1510915933:615001..615306 | Clytia hemisphaerica | exon |
| TCONS_00012303-exon-sc0000143-1575043694:615001..615306 | TCONS_00012303-exon-sc0000143-1575043694:615001..615306 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000143 | supercontig | sc0000143:614253..615306 + |
Blast
The following BLAST results are available for this feature:
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