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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00012151 ID=TCONS_00012151|Name=TCONS_00012151|organism=Clytia hemisphaerica|type=transcript|length=1087bp
CTCGTCTAATTTATCCAGTAAaaaacttgttcttataaatgaaAAGGATT
TCTCATCTCTAATCTCGTCTAAGCAGATAGTGTTTGAATAACAGAAGGAA
TAATCTAGCGATTTAGAATAGTCTAGCGATTTATAACAGTTAACCTATGA
TAGGGTTTGAACTGTAGAGCTCTTGTCTCCTACAGTGATTGTTGAAACTT
CTACGGTGAAAGATCTGGCTTAACATGCTGCCCCAATTTTCGTAACTGGC
ATATACCGTTTATTAGATATTGAGCAGTGGTGTGGTAGATTACCAAACAT
TTGGGGGAAAACTGGgcagaaaaatttccaaaatcgCATTGCAACCCTAT
CGTCAAAAAGTCTACACCGACCACATTTTAACTGCTGTTGTTGAAATTAA
GCTAACCTCAAGGATTCGACTATAATTCAACGCCTCACTTTAAATTCTAA
AGCTTTGAGAAAAAACGACCCAAAGGAAAACCTTAGGCTTTCaagaaatt
catgatattcatgacgtaatgttttatacggaagcaccaaAAAAAGACAG
TTTACCACTAAATTTGAACTTACAAAATAAAACTACTGCTGACGatttct
aattcgatcttcaagaggaattggatttttatcgaataagggagcgtcgt
ttatgagagtttcttgttgacgtggactttaaatttcatcgaataaggga
gcctatcgaatagaaGAACGTCAAATTAGAGCGCGTTAACTGTAGTGGCA
AGTCCCTCCGTTAAAAATATTGTGTGCTTCCgtttaaaacattacgtcat
ggttATTATGAATATAGCTTCAGGATGTCAGGGCAAGCCCTTCTCTCAGA
TATATACATCGAAGTaacattttcataaaactttaaaaacgcaaaaaata
cATATTCTCGAAATCGAGTCACTGAAGAAAAAAAGCCCATCTAAGTAAGA
ACGCgctaaaaaaggcaaaaaagttacaaaaaaaataaggaaaaaatttg
aaaaatacacaATAAAGTTGAAGCATAGATATTTAAACGTAGATTAATAT
CAATCAAACATGTTGAATAAAACACAGAACGGCAGGA Run BLAST on NCBI transcript from alignment at sc0000137:362165..363251 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00012151 ID=TCONS_00012151|Name=TCONS_00012151|organism=Clytia hemisphaerica|type=transcript|length=1087bp|location=Sequence derived from alignment at sc0000137:362165..363251 (Clytia hemisphaerica)
TCCTGCCGTTCTGTGTTTTATTCAACATGTTTGATTGATATTAATCTACG
TTTAAATATCTATGCTTCAACTTTATtgtgtatttttcaaattttttcct
tattttttttgtaacttttttgccttttttagcGCGTTCTTACTTAGATG
GGCTTTTTTTCTTCAGTGACTCGATTTCGAGAATATgtattttttgcgtt
tttaaagttttatgaaaatgttACTTCGATGTATATATCTGAGAGAAGGG
CTTGCCCTGACATCCTGAAGCTATATTCATAATaaccatgacgtaatgtt
ttaaacGGAAGCACACAATATTTTTAACGGAGGGACTTGCCACTACAGTT
AACGCGCTCTAATTTGACGTTCttctattcgataggctcccttattcgat
gaaatttaaagtccacgtcaacaagaaactctcataaacgacgctccctt
attcgataaaaatccaattcctcttgaagatcgaattagaaatCGTCAGC
AGTAGTTTTATTTTGTAAGTTCAAATTTAGTGGTAAACTGTCTTTTTttg
gtgcttccgtataaaacattacgtcatgaatatcatgaatttcttGAAAG
CCTAAGGTTTTCCTTTGGGTCGTTTTTTCTCAAAGCTTTAGAATTTAAAG
TGAGGCGTTGAATTATAGTCGAATCCTTGAGGTTAGCTTAATTTCAACAA
CAGCAGTTAAAATGTGGTCGGTGTAGACTTTTTGACGATAGGGTTGCAAT
GcgattttggaaatttttctgcCCAGTTTTCCCCCAAATGTTTGGTAATC
TACCACACCACTGCTCAATATCTAATAAACGGTATATGCCAGTTACGAAA
ATTGGGGCAGCATGTTAAGCCAGATCTTTCACCGTAGAAGTTTCAACAAT
CACTGTAGGAGACAAGAGCTCTACAGTTCAAACCCTATCATAGGTTAACT
GTTATAAATCGCTAGACTATTCTAAATCGCTAGATTATTCCTTCTGTTAT
TCAAACACTATCTGCTTAGACGAGATTAGAGATGAGAAATCCTTttcatt
tataagaacaagttttTTACTGGATAAATTAGACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00012151-exon-sc0000137-1491911889:362165..363251 | TCONS_00012151-exon-sc0000137-1491911889:362165..363251 | Clytia hemisphaerica | exon |
| TCONS_00012151-exon-sc0000137-1510915933:362165..363251 | TCONS_00012151-exon-sc0000137-1510915933:362165..363251 | Clytia hemisphaerica | exon |
| TCONS_00012151-exon-sc0000137-1575043694:362165..363251 | TCONS_00012151-exon-sc0000137-1575043694:362165..363251 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000137 | supercontig | sc0000137:362165..363251 . |
Blast
The following BLAST results are available for this feature:
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