TCONS_00012132 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012132
Unique NameTCONS_00012132
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2481

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012132 ID=TCONS_00012132|Name=TCONS_00012132|organism=Clytia hemisphaerica|type=transcript|length=2481bp
CAGACATTTAATGGAAAATTAGTTAACTATGAGCGAAGGAAAACAGAGTC
AATTTCGCCGCGAAGAAGAGGAGATTGCCAAAGGTGCCAGAGCCATGGAG
GATCctaaaagatgttcaatttgtTTACAACCAAAAACTCCGAATTCTTC
ATCCAACAAGTGTGATCAATGTTTggataaaataaacaaagttcCAACAG
GATTCGCTTTCAGGGCGGTGGAAGGCCAGGGAGataaagaattcgaatgt
cccATTTGTTTGTGTTTAATCAAAGGAGCAACTGAGCTCCCTTGTGAACA
TTTGATGTGTGGGGGATGTTTGCTTCACTATGAGAAAGGACAAACTGAGA
AAGCGGAAAAGGAAGAGCCGAAGAAAAATCCAGAATTTCTTTGCAGTGTA
TGCATGACACCTTACAAAGTTCAAGACaaaaagtcgGTAAAGTCCACTGA
TCGTTTTATACAAAACACGATCAGGGTTCATTGCATGCAAAAAGATTGTC
CGTGGATTGGTTCCATCAAGGATTACGAGgttCATGTTAAGAAATGTGAC
TATAATGGCAAAATAAAATGCCCATATTTCGAGTTGGGTTGTCTCAATAC
GTTCGAGGTGCAAAATTTACCAAAACACAACGCAATGAATCGACAAATCC
ACGAAGCTTTGCTTTTGAACGTCGTAAATGTGTTGGCAAAAGAGAGACTA
GAAAATCGAACACTCTtcgaaaaccaaaacaaaacaatcgaaCGTTTAGA
AGAAAGAATGGACAAAATTGAAGTAGAAAACAAGGATCTGCTGGACAAAT
ATGAGACCCAATCCAATCTTCTCATAAAAAATACTAAGGAAATCGAAtcg
ttgaaaaatgaaaatgcaaacTTAAACCAAATGCTTCAACAACAAAATGA
CAATGTTTTGAATATTCATCAAAAACTTCAATTATTAGAAAAGGAAAATC
CTAAAGACATTGAAAAGACTTTAAAGGGACAGagaaaagatgttgaaaat
ttgaaaacatttgcAAAGACCGTCGGTAAATTACATGGAACATTGAGTGA
CGTTAATGTAAGAgagaattttcgaataaaaaagtACCTTTACGATAAAG
ATTATATAAAAAATGGAGAtgcaaaacaatggaatgatTTTGTCCAACAA
ATCAATACAAACGAAGATTTCAATGGAGATTGTAATTACCTTCAACAAAT
GAAAAACGATGTGAATCGTTATCAAGATCACAACACCTACGATAATTTTA
ACAGGACAACTCGAGACATGAAATGGACAAAACATTCACATGATATAGCA
AGTTATTCGAGTGGACATCAAGGTTCATGGTGTCTCAATGTTGCTGTCAT
CTTACCACCTTGGTGTAAAAACGTTTACATTCTTCATTGGAACAAAGaag
acaaaaagttgaaaattccaCTCAATGGGACAGTTGTATCTTTGAAAGGA
GATGATCAGTATTGCAGTGCTTTTGTCATGTTACAAATTGAAGagtaaaa
caaaaaactttggatgtaAAATATTTATGCTCGTGGTGTCTCAATGTTGC
TGTCGTCATGCCACCTTGGTATAAAGGGAGATAAATGGTATCGCAGTCCT
TTTGTCATGTTACAATTGGAatagtgaaataaaaaaactttccaTGAAAA
AGGCATACGGTGTCTCAATGTTGCTGTCATGTTTCCagattatttcaaaa
tatttctagaggaaaagaggttttacaaaaatttttgctgcataaaaaac
tttaacatctctactttttttccaggaagttctttttcaaaattttcaat
ttcaacaatatttttcaatcgcttaaagataggtagcttttttaaatggc
ccccaaaacggaggtttgcaattttagtgatttctcgagatatctttaag
atatgaatacaaaattttgaccatagtttggaaatgtgatttagagagTT
TTGGGCATaagtttgtttgataaaatttttacagtatacccctggttgtc
aaaatgcaggtttggggcccccaaaacgtaggtgtagttaaaatcaaatt
attaagcccagtggtaataggggggaaaactatgaacatatttgtgttta
cccttaaatttacgacccgatggatgtaaaatttatgatttttatgaaat
atttcaagattttcgatattgggctcttccagaaaaaatccgttcatggg
gggtggaggatatattaattttttcatgaattacccctggacattttgat
ttttaACCCCCTGGACATGGGTTATccccctggacattgcaattttttgg
tattttttcaatacccctggacaattcatcctccaccccccatgaacgga
ttttttctggaagagcccattgcaaagtccaaactgaaattttagaaatt
ttcaaaatgacaattttgatttaacaacgtcttaatcaagtttctgaaaa
ccaatctcttttgaaaacaGTTCCATTCATG
Run BLAST on NCBI

protein sequence of TCONS_00012132-protein

>TCONS_00012132-protein ID=TCONS_00012132-protein|Name=TCONS_00012132-protein|organism=Clytia hemisphaerica|type=polypeptide|length=489bp
MSEGKQSQFRREEEEIAKGARAMEDPKRCSICLQPKTPNSSSNKCDQCLD
KINKVPTGFAFRAVEGQGDKEFECPICLCLIKGATELPCEHLMCGGCLLH
YEKGQTEKAEKEEPKKNPEFLCSVCMTPYKVQDKKSVKSTDRFIQNTIRV
HCMQKDCPWIGSIKDYEVHVKKCDYNGKIKCPYFELGCLNTFEVQNLPKH
NAMNRQIHEALLLNVVNVLAKERLENRTLFENQNKTIERLEERMDKIEVE
NKDLLDKYETQSNLLIKNTKEIESLKNENANLNQMLQQQNDNVLNIHQKL
QLLEKENPKDIEKTLKGQRKDVENLKTFAKTVGKLHGTLSDVNVRENFRI
KKYLYDKDYIKNGDAKQWNDFVQQINTNEDFNGDCNYLQQMKNDVNRYQD
HNTYDNFNRTTRDMKWTKHSHDIASYSSGHQGSWCLNVAVILPPWCKNVY
ILHWNKEDKKLKIPLNGTVVSLKGDDQYCSAFVMLQIEE
Run BLAST on NCBI

transcript from alignment at sc0000137:512037..517917-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012132 ID=TCONS_00012132|Name=TCONS_00012132|organism=Clytia hemisphaerica|type=transcript|length=5881bp|location=Sequence derived from alignment at sc0000137:512037..517917- (Clytia hemisphaerica)
CAGACATTTAATGGAAAATTAGTTAACTATGAGCGAAGGAAAACAGAGTC AATTTCGCCGCGAAGAAGAGGAGATTGCCAAAGGTGCCAGAGCCATGGAG GATCCTAAAAGATGTTCAATTTGTTTACAACCAAAAACTCCGAATTCTTC ATCCAACAAGTGTGATCAATGTTTGGATAAAATAAACAAAGTTCCAACAG GATTCGCTTTCAGGGCGGTGGAAGGCCAGGGAGATAAAGAATTCGAATGT CCCATTTGTTTGTGTTTAATCAAAGGAGCAACTGAGCTCCCTTGTGAACA TTTGATGTGTGGGGGATGTTTGCTTCACTATGAGAAAGGACAAACTGAGA AAGCGGAAAAGTAAGTTCAAACTTTTTTTTTATTTAGAAAAATCATAATC TTTTCTAGATGTCAAGTTGACCCAGAATTGATTTTTCAAGTTAAAAAAGC TTTTATATTTTTCTCAGATGCCATCAAAACTTTAGTAGAAGATGAAAATA GTGATAATTTGAAACTTAAATTGGGTTGAGAGAAGACATAGAATTCAGTC TTAATTTACTTCTAGTTTTCATCCTTTAAAATAAAGAGCAGTGTTTTGAT TTTTGAAATGAACAGATACACGCTTTTTTTTATAAGAATATCTTCTATAA GAATATCAGGGTGAAAATTGGCCAAATCGTAAGAATACCCTAAGAATGCC ATCGAGGGTGAATTTCATAAGAATACAGTCATTTTGTATATTTGGTTAAC AGAAAAATCTGCTTCCTTTGTTAGAGATGAAGCTTCGTGGAAGAAATGTA ATTTTAACCCAAATGCAAAACTCTCAATTTGATCATTTCTCATGTTTGTA AAAAAGTCAAGTCTGAAAAAGTAAGAATGCGTTAAGAATATTTCACCCTC AATTTTGGCACTTTCTTAAGAATACTTGACCCTTATCCAAAGTAAACTAT TCTTATAAAAAGAAGCGTGTAATATTGGACAAATTTAAGAAGAAATTAAT CTTTCTTTTCAGGGAAGAGCCGAAGAAAAATCCAGAATTTCTTTGCAGTG TATGCATGACACCTTACAAAGTTCAAGACGTGAGTTATCTATTTCAGTAT TTTTTATTGCGTGCAGAAGGACTGGTATAACTCATATAGATTTCGATACA CTCCTGGGTGCCTTGATTTGAAAAATTGCAAATTTAGAGATCTTTCAAAT TCAAAACGCTTCTACGAAAGGGTCGGCGAGGTAGTTAGACTGTGTGATGA TAATTTTCTTTCTTTGTCGGTATTTGAAGAAAAGTGACGATGTTTAGGTG TCAAACGTGTCATGTGTTGACAAAATAATAATTTCTGCAATTCTTCACAT CTAAAGTTGATAAGAGTAAGAGTTGCTACCCACCTAAAAAAGTTCTTTAT TTTCACTTTTTCAGAAAAAGTCGGTAAAGTCCACTGATCGTTTTATACAA AACACGATCAGGGTTCATTGCATGCAAAAAGATTGTCCGTGGATTGGTTC CATCAAGGATTACGAGGTAAATTCACAAACACATTCTTTTTTATTTTACT AGCCATAACTTTCATTAATGTGCCACCGCAGCAAAACGAACACATAGAGT TGAATTTGCGTTCAAAAGGAATGATCTTAGCCCTACAGTAATTTTTGTTA AGAGCGACCTCTCATCTGAGACAAAACTCTTTCAAATGCTAACAAATGTG TCAAGGGAGTGATTTACAGTCTACTTAGAGTGACATCCGTGCCTTGNCTC ATCTGAGACAAAATTCTTTCAAATGCTAACAAATGTGTCAAGGGAGTGAT TTACAGTCTACTTAGAGTGACATCCGTGCCTTGTCTTACACGTTTTTTAT AAGAGCAATTTCATAAGAATACGAGGTTGAAATTTGGCCAAAACCTTAGA ACAAATTAAGAAGAATCTGAGCCTCAGATTTCAGAAATTACTGAGAAGTA CAGGTTTCCATTCTCATTAATATTGACATTTAAGCCTGAAAAACTCATAT AAAATTAAGAGCAGCCCAGCCCGAATCATATGACTTACTGGTTTTTCCTT TAAAAAGCGTATATCTGAAGATACTGCTCTTCATATGTTATTTTACTCTA ATGTACACGTTTAACAACATAACTGTTCGAGTACTTTGAGTAGAAGAGTT ATATTTTTAACCTATGAAGAGCGCTTAATAACTACTTGTGGTATAAAAAG GGAACTTCCCAGAAAAGAGAATTTCCTTAGATTCCTTAACTTTCCAGGGA TAAGAAAAAGACAAACTGAGATTTCAAAATGAGTAATCAGATGAAAATAA CTCCGAAAAGTCTTTTTGATAATGATAAAACTATAGAGAGACCGTAAGAT AAGAATGCTACCGTTAAGCGGAACTTATATACTGAAAAACGCGCGCAAAA ACAAACGCAAAATTATGAGATGTTTGCCCAACTTCCTTATGCGTAAAGCT ATTAATGCCATCCTCGGGAGCTTTAGGCTCCCTGCGGTGGCAATAAGAAC CATTTTGTAGAGGCTCGGCTGTTCTTAAACTCGAAAAACTGTTTATCTTC TCTGCCCTTTGTTCCTTTTGCTATGACACAAACGAATTAAGACTAAGGGC TCTGACCATAGTGAATTTTTCATAATTACCATGTTTAAAATGTGTTTTCT GACTGATGTAACCAACAAAACTATGGCATGTTATACATTTTCTGTTAGAC AAACTATTCCTGAATCTGAAAATTCAAAAATTGCATTGAAGAAATTTGAT GAAGAAGAAAATAGTGGTTTTTCATCAATTCTTCATCTGTATTTTCCTTA AAAAAACAGTCATAACTTTTGACACATCTTTTTAGAAAAACTTTCCGCAA AATTTAAAATAATTCAATTCTTTGCGGACAGTTTGAAAAAAATTCCAAAC AAAAAGGTTAATTACCCATTAAAACTTAGCACTTTTTATAAAAGAAGGTG ATGCAACATATTATTAACGTCTTTTTAAAGTTCATAACGTCATTTTTGCA ATTAAGTTCTTAATTACTCTTGAGGGGTTTGACTAAAAAGTAATTTATAA AGACAATTCTTTGTGAAAAGTGTTAAAGAATCTAAAACATAACTTTTATG TTCAGATACTAAAATCAATTTTCTGACTATGGTCAGAGCCCTTAAGGCCG GTCTCCACTTTCGCGCGACATAAGCGAAAACTTTTTGACGTTTTTGTAAG ATCATTGGTCGGTTGAAAAATGAAGCAATTCCATTGGTAGAAATTGACGT TACGGATGAAAAAAGTAGAACTTCCTTCATTTTTTTTTTGATCGCGTCAA ACTTTTTTATGACGTAATCTTTTCTTCAGGCAAAAAATGCTAGTAAAAAA AACGGTCGCCCATTCCGCGCGAAAGTCCGGCCTTTATATCCTTTTTTATT TTTTTAGGTTCATGTTAAGAAATGTGACTATAATGGCAAAATAAAATGCC CATATTTCGAGTTGGGTTGTCTCAATACGGTAAGTTTTCTTTCATCGATG AAAAGAAAATCTTTTCAAAGAAGATTCTCGGAACAAATTGGTTTTATTTA TACATTTTTATTTTCAGAATTACAATTTCAGCAATTTTATTAATAAAGAA ATTAGAAATCGCATTTTTAGTAAAAATGGCCTCCTTGCTAATTTGAACTT CTGTTAATCGAATTTCTCTATAAATCGAACTAATTTTCCCTGTCAAGGCG AGACCTTCCTAAATTGCTTTCCATTCGAGTCTCTGACAAATTAGATTCTT TGAGTTTGAATTAGCGAAAGTCAATTGTATAAAGAACACAAGATTTGAAT AAGTTGTTTTCACTTCAATTTCTCCAGTTTCTATCATGTTCGTCATCTCT TATACATTCCGTTTGTTTTTAGTTCGAGGTGCAAAATTTACCAAAACACA ACGCAATGAATCGACAAATCCACGAAGCTTTGCTTTTGAACGTCGTAAAT GTGTTGGCAAAAGAGAGACTAGAAAATCGAACACTCTTCGAAAACCAAAA CAAAACAATCGAACGTTTAGAAGAAAGAATGGACAAAATTGAAGTAGAAA ACAAGGATCTGCTGGACAAATATGAGACCCAATCCAATCTTCTCATAAAA AATACTAAGGAAATCGAATCGTTGAAAAATGAAAATGCAAACTTAAACCA AATGCTTCAACAACAAAATGACAATGTTTTGAATATTCATCAAAAACTTC AATTATTAGAAAAGGAAAATCCTAAAGACATTGAAAAGACTTTAAAGGGA CAGAGAAAAGATGTTGAAAATTTGAAAACATTTGCAAAGACCGTCGGTAA ATTACATGGAACATTGAGTGACGTTAATGTAAGAGAGAATTTTCGAATAA AAAAGTACCTTTACGATAAAGATTATATAAAAAATGGAGATGCAAAACAA TGGAATGATTTTGTCCAACAAATCAATACAAACGAAGATTTCAATGGAGA TTGTAATTACCTTCAACAAATGAAAAACGATGTGAATCGTTATCAAGGTA CTGTATACTCAAAGTCTTGGAATACAAGGTTATATCAGTTTGCAAATGCA ATTGATCGAGGAGTGATGATAAACAACCATATAAAACTTTGTTCACCTTA CATAGTGAAATACATCTCCGTTATAGATCACAACACCTACGATAATTTTA ACAGGACAACTCGAGACATGAAATGGACAAAACATTCACATGATATAGCA AGTTATTCGAGTGGACATCAAGGTTCATGGTGTCTCAATGTTGCTGTCAT CTTACCACCTTGGTGTAAAAACGTTTACATTCTTCATTGGAACAAAGAAG ACAAAAAGTTGAAAATTCCACTCAATGGGACAGTTGTATCTTTGAAAGGA GATGATCAGTATTGCAGTGCTTTTGTCATGTTACAAATTGAAGAGTAAAA CAAAAAACTTTGGATGTAAAATATTTATGCTCGTGGTGTCTCAATGTTGC TGTCGTCATGCCACCTTGGTATAAAGGGAGATAAATGGTATCGCAGTCCT TTTGTCATGTTACAATTGGAATAGTGAAATAAAAAAACTTTCCATGAAAA AGGCATACGGTGTCTCAATGTTGCTGTCATGTTTCCAGATTATTTCAAAA TATTTCTAGAGGAAAAGAGGTTTTACAAAAATTTTTGCTGCATAAAAAAC TTTAACATCTCTACTTTTTTTCCAGGAAGTTCTTTTTCAAAATTTTCAAT TTCAACAATATTTTTCAATCGCTTAAAGATAGGTAGCTTTTTTAAATGGC CCCCAAAACGGAGGTTTGCAATTTTAGTGATTTCTCGAGATATCTTTAAG ATATGAATACAAAATTTTGACCATAGTTTGGAAATGTGATTTAGAGAGTT TTGGGCATAAGTTTGTTTGATAAAATTTTTACAGTATACCCCTGGTTGTC AAAATGCAGGTTTGGGGCCCCCAAAACGTAGGTGTAGTTAAAATCAAATT ATTAAGCCCAGTGGTAATAGGGGGGAAAACTATGAACATATTTGTGTTTA CCCTTAAATTTACGACCCGATGGATGTAAAATTTATGATTTTTATGAAAT ATTTCAAGATTTTCGATATTGGGCTCTTCCAGAAAAAATCCGTTCATGGG GGGTGGAGGATATATTAATTTTTTCATGAATTACCCCTGGACATTTTGAT TTTTAACCCCCTGGACATGGGTTATCCCCCTGGACATTGCAATTTTTTGG TATTTTTTCAATACCCCTGGACAATTCATCCTCCACCCCCCATGAACGGA TTTTTTCTGGAAGAGCCCATTGCAAAGTCCAAACTGAAATTTTAGAAATT TTCAAAATGACAATTTTGATTTAACAACGTCTTAATCAAGTTTCTGAAAA CCAATCTCTTTTGAAAACAGTTCCATTCATG

Coding sequence (CDS) from alignment at sc0000137:512037..517917-

>TCONS_00012132 ID=TCONS_00012132|Name=TCONS_00012132|organism=Clytia hemisphaerica|type=CDS|length=8820bp|location=Sequence derived from alignment at sc0000137:512037..517917- (Clytia hemisphaerica)
ATCACAACACCTACGATAATTTTAACAGGACAACTCGAGACATGAAATGG
ACAAAACATTCACATGATATAGCAAGTTATTCGAGTGGACATCAAGGTTC
ATGGTGTCTCAATGTTGCTGTCATCTTACCACCTTGGTGTAAAAACGTTT
ACATTCTTCATTGGAACAAAGAAGACAAAAAGTTGAAAATTCCACTCAAT
GGGACAGTTGTATCTTTGAAAGGAGATGATCAGTATTGCAGTGCTTTTGT
CATGTTACAAATTGAAGAGTAATTCGAGGTGCAAAATTTACCAAAACACA
ACGCAATGAATCGACAAATCCACGAAGCTTTGCTTTTGAACGTCGTAAAT
GTGTTGGCAAAAGAGAGACTAGAAAATCGAACACTCTTCGAAAACCAAAA
CAAAACAATCGAACGTTTAGAAGAAAGAATGGACAAAATTGAAGTAGAAA
ACAAGGATCTGCTGGACAAATATGAGACCCAATCCAATCTTCTCATAAAA
AATACTAAGGAAATCGAATCGTTGAAAAATGAAAATGCAAACTTAAACCA
AATGCTTCAACAACAAAATGACAATGTTTTGAATATTCATCAAAAACTTC
AATTATTAGAAAAGGAAAATCCTAAAGACATTGAAAAGACTTTAAAGGGA
CAGAGAAAAGATGTTGAAAATTTGAAAACATTTGCAAAGACCGTCGGTAA
ATTACATGGAACATTGAGTGACGTTAATGTAAGAGAGAATTTTCGAATAA
AAAAGTACCTTTACGATAAAGATTATATAAAAAATGGAGATGCAAAACAA
TGGAATGATTTTGTCCAACAAATCAATACAAACGAAGATTTCAATGGAGA
TTGTAATTACCTTCAACAAATGAAAAACGATGTGAATCGTTATCAAGGTT
CATGTTAAGAAATGTGACTATAATGGCAAAATAAAATGCCCATATTTCGA
GTTGGGTTGTCTCAATACGAAAAAGTCGGTAAAGTCCACTGATCGTTTTA
TACAAAACACGATCAGGGTTCATTGCATGCAAAAAGATTGTCCGTGGATT
GGTTCCATCAAGGATTACGAGGGAAGAGCCGAAGAAAAATCCAGAATTTC
TTTGCAGTGTATGCATGACACCTTACAAAGTTCAAGACATGAGCGAAGGA
AAACAGAGTCAATTTCGCCGCGAAGAAGAGGAGATTGCCAAAGGTGCCAG
AGCCATGGAGGATCCTAAAAGATGTTCAATTTGTTTACAACCAAAAACTC
CGAATTCTTCATCCAACAAGTGTGATCAATGTTTGGATAAAATAAACAAA
GTTCCAACAGGATTCGCTTTCAGGGCGGTGGAAGGCCAGGGAGATAAAGA
ATTCGAATGTCCCATTTGTTTGTGTTTAATCAAAGGAGCAACTGAGCTCC
CTTGTGAACATTTGATGTGTGGGGGATGTTTGCTTCACTATGAGAAAGGA
CAAACTGAGAAAGCGGAAAAATCACAACACCTACGATAATTTTAACAGGA
CAACTCGAGACATGAAATGGACAAAACATTCACATGATATAGCAAGTTAT
TCGAGTGGACATCAAGGTTCATGGTGTCTCAATGTTGCTGTCATCTTACC
ACCTTGGTGTAAAAACGTTTACATTCTTCATTGGAACAAAGAAGACAAAA
AGTTGAAAATTCCACTCAATGGGACAGTTGTATCTTTGAAAGGAGATGAT
CAGTATTGCAGTGCTTTTGTCATGTTACAAATTGAAGAGTAATTCGAGGT
GCAAAATTTACCAAAACACAACGCAATGAATCGACAAATCCACGAAGCTT
TGCTTTTGAACGTCGTAAATGTGTTGGCAAAAGAGAGACTAGAAAATCGA
ACACTCTTCGAAAACCAAAACAAAACAATCGAACGTTTAGAAGAAAGAAT
GGACAAAATTGAAGTAGAAAACAAGGATCTGCTGGACAAATATGAGACCC
AATCCAATCTTCTCATAAAAAATACTAAGGAAATCGAATCGTTGAAAAAT
GAAAATGCAAACTTAAACCAAATGCTTCAACAACAAAATGACAATGTTTT
GAATATTCATCAAAAACTTCAATTATTAGAAAAGGAAAATCCTAAAGACA
TTGAAAAGACTTTAAAGGGACAGAGAAAAGATGTTGAAAATTTGAAAACA
TTTGCAAAGACCGTCGGTAAATTACATGGAACATTGAGTGACGTTAATGT
AAGAGAGAATTTTCGAATAAAAAAGTACCTTTACGATAAAGATTATATAA
AAAATGGAGATGCAAAACAATGGAATGATTTTGTCCAACAAATCAATACA
AACGAAGATTTCAATGGAGATTGTAATTACCTTCAACAAATGAAAAACGA
TGTGAATCGTTATCAAGGTTCATGTTAAGAAATGTGACTATAATGGCAAA
ATAAAATGCCCATATTTCGAGTTGGGTTGTCTCAATACGAAAAAGTCGGT
AAAGTCCACTGATCGTTTTATACAAAACACGATCAGGGTTCATTGCATGC
AAAAAGATTGTCCGTGGATTGGTTCCATCAAGGATTACGAGGGAAGAGCC
GAAGAAAAATCCAGAATTTCTTTGCAGTGTATGCATGACACCTTACAAAG
TTCAAGACATGAGCGAAGGAAAACAGAGTCAATTTCGCCGCGAAGAAGAG
GAGATTGCCAAAGGTGCCAGAGCCATGGAGGATCCTAAAAGATGTTCAAT
TTGTTTACAACCAAAAACTCCGAATTCTTCATCCAACAAGTGTGATCAAT
GTTTGGATAAAATAAACAAAGTTCCAACAGGATTCGCTTTCAGGGCGGTG
GAAGGCCAGGGAGATAAAGAATTCGAATGTCCCATTTGTTTGTGTTTAAT
CAAAGGAGCAACTGAGCTCCCTTGTGAACATTTGATGTGTGGGGGATGTT
TGCTTCACTATGAGAAAGGACAAACTGAGAAAGCGGAAAAATCACAACAC
CTACGATAATTTTAACAGGACAACTCGAGACATGAAATGGACAAAACATT
CACATGATATAGCAAGTTATTCGAGTGGACATCAAGGTTCATGGTGTCTC
AATGTTGCTGTCATCTTACCACCTTGGTGTAAAAACGTTTACATTCTTCA
TTGGAACAAAGAAGACAAAAAGTTGAAAATTCCACTCAATGGGACAGTTG
TATCTTTGAAAGGAGATGATCAGTATTGCAGTGCTTTTGTCATGTTACAA
ATTGAAGAGTAATTCGAGGTGCAAAATTTACCAAAACACAACGCAATGAA
TCGACAAATCCACGAAGCTTTGCTTTTGAACGTCGTAAATGTGTTGGCAA
AAGAGAGACTAGAAAATCGAACACTCTTCGAAAACCAAAACAAAACAATC
GAACGTTTAGAAGAAAGAATGGACAAAATTGAAGTAGAAAACAAGGATCT
GCTGGACAAATATGAGACCCAATCCAATCTTCTCATAAAAAATACTAAGG
AAATCGAATCGTTGAAAAATGAAAATGCAAACTTAAACCAAATGCTTCAA
CAACAAAATGACAATGTTTTGAATATTCATCAAAAACTTCAATTATTAGA
AAAGGAAAATCCTAAAGACATTGAAAAGACTTTAAAGGGACAGAGAAAAG
ATGTTGAAAATTTGAAAACATTTGCAAAGACCGTCGGTAAATTACATGGA
ACATTGAGTGACGTTAATGTAAGAGAGAATTTTCGAATAAAAAAGTACCT
TTACGATAAAGATTATATAAAAAATGGAGATGCAAAACAATGGAATGATT
TTGTCCAACAAATCAATACAAACGAAGATTTCAATGGAGATTGTAATTAC
CTTCAACAAATGAAAAACGATGTGAATCGTTATCAAGGTTCATGTTAAGA
AATGTGACTATAATGGCAAAATAAAATGCCCATATTTCGAGTTGGGTTGT
CTCAATACGAAAAAGTCGGTAAAGTCCACTGATCGTTTTATACAAAACAC
GATCAGGGTTCATTGCATGCAAAAAGATTGTCCGTGGATTGGTTCCATCA
AGGATTACGAGGGAAGAGCCGAAGAAAAATCCAGAATTTCTTTGCAGTGT
ATGCATGACACCTTACAAAGTTCAAGACATGAGCGAAGGAAAACAGAGTC
AATTTCGCCGCGAAGAAGAGGAGATTGCCAAAGGTGCCAGAGCCATGGAG
GATCCTAAAAGATGTTCAATTTGTTTACAACCAAAAACTCCGAATTCTTC
ATCCAACAAGTGTGATCAATGTTTGGATAAAATAAACAAAGTTCCAACAG
GATTCGCTTTCAGGGCGGTGGAAGGCCAGGGAGATAAAGAATTCGAATGT
CCCATTTGTTTGTGTTTAATCAAAGGAGCAACTGAGCTCCCTTGTGAACA
TTTGATGTGTGGGGGATGTTTGCTTCACTATGAGAAAGGACAAACTGAGA
AAGCGGAAAAATCACAACACCTACGATAATTTTAACAGGACAACTCGAGA
CATGAAATGGACAAAACATTCACATGATATAGCAAGTTATTCGAGTGGAC
ATCAAGGTTCATGGTGTCTCAATGTTGCTGTCATCTTACCACCTTGGTGT
AAAAACGTTTACATTCTTCATTGGAACAAAGAAGACAAAAAGTTGAAAAT
TCCACTCAATGGGACAGTTGTATCTTTGAAAGGAGATGATCAGTATTGCA
GTGCTTTTGTCATGTTACAAATTGAAGAGTAATTCGAGGTGCAAAATTTA
CCAAAACACAACGCAATGAATCGACAAATCCACGAAGCTTTGCTTTTGAA
CGTCGTAAATGTGTTGGCAAAAGAGAGACTAGAAAATCGAACACTCTTCG
AAAACCAAAACAAAACAATCGAACGTTTAGAAGAAAGAATGGACAAAATT
GAAGTAGAAAACAAGGATCTGCTGGACAAATATGAGACCCAATCCAATCT
TCTCATAAAAAATACTAAGGAAATCGAATCGTTGAAAAATGAAAATGCAA
ACTTAAACCAAATGCTTCAACAACAAAATGACAATGTTTTGAATATTCAT
CAAAAACTTCAATTATTAGAAAAGGAAAATCCTAAAGACATTGAAAAGAC
TTTAAAGGGACAGAGAAAAGATGTTGAAAATTTGAAAACATTTGCAAAGA
CCGTCGGTAAATTACATGGAACATTGAGTGACGTTAATGTAAGAGAGAAT
TTTCGAATAAAAAAGTACCTTTACGATAAAGATTATATAAAAAATGGAGA
TGCAAAACAATGGAATGATTTTGTCCAACAAATCAATACAAACGAAGATT
TCAATGGAGATTGTAATTACCTTCAACAAATGAAAAACGATGTGAATCGT
TATCAAGGTTCATGTTAAGAAATGTGACTATAATGGCAAAATAAAATGCC
CATATTTCGAGTTGGGTTGTCTCAATACGAAAAAGTCGGTAAAGTCCACT
GATCGTTTTATACAAAACACGATCAGGGTTCATTGCATGCAAAAAGATTG
TCCGTGGATTGGTTCCATCAAGGATTACGAGGGAAGAGCCGAAGAAAAAT
CCAGAATTTCTTTGCAGTGTATGCATGACACCTTACAAAGTTCAAGACAT
GAGCGAAGGAAAACAGAGTCAATTTCGCCGCGAAGAAGAGGAGATTGCCA
AAGGTGCCAGAGCCATGGAGGATCCTAAAAGATGTTCAATTTGTTTACAA
CCAAAAACTCCGAATTCTTCATCCAACAAGTGTGATCAATGTTTGGATAA
AATAAACAAAGTTCCAACAGGATTCGCTTTCAGGGCGGTGGAAGGCCAGG
GAGATAAAGAATTCGAATGTCCCATTTGTTTGTGTTTAATCAAAGGAGCA
ACTGAGCTCCCTTGTGAACATTTGATGTGTGGGGGATGTTTGCTTCACTA
TGAGAAAGGACAAACTGAGAAAGCGGAAAAATCACAACACCTACGATAAT
TTTAACAGGACAACTCGAGACATGAAATGGACAAAACATTCACATGATAT
AGCAAGTTATTCGAGTGGACATCAAGGTTCATGGTGTCTCAATGTTGCTG
TCATCTTACCACCTTGGTGTAAAAACGTTTACATTCTTCATTGGAACAAA
GAAGACAAAAAGTTGAAAATTCCACTCAATGGGACAGTTGTATCTTTGAA
AGGAGATGATCAGTATTGCAGTGCTTTTGTCATGTTACAAATTGAAGAGT
AATTCGAGGTGCAAAATTTACCAAAACACAACGCAATGAATCGACAAATC
CACGAAGCTTTGCTTTTGAACGTCGTAAATGTGTTGGCAAAAGAGAGACT
AGAAAATCGAACACTCTTCGAAAACCAAAACAAAACAATCGAACGTTTAG
AAGAAAGAATGGACAAAATTGAAGTAGAAAACAAGGATCTGCTGGACAAA
TATGAGACCCAATCCAATCTTCTCATAAAAAATACTAAGGAAATCGAATC
GTTGAAAAATGAAAATGCAAACTTAAACCAAATGCTTCAACAACAAAATG
ACAATGTTTTGAATATTCATCAAAAACTTCAATTATTAGAAAAGGAAAAT
CCTAAAGACATTGAAAAGACTTTAAAGGGACAGAGAAAAGATGTTGAAAA
TTTGAAAACATTTGCAAAGACCGTCGGTAAATTACATGGAACATTGAGTG
ACGTTAATGTAAGAGAGAATTTTCGAATAAAAAAGTACCTTTACGATAAA
GATTATATAAAAAATGGAGATGCAAAACAATGGAATGATTTTGTCCAACA
AATCAATACAAACGAAGATTTCAATGGAGATTGTAATTACCTTCAACAAA
TGAAAAACGATGTGAATCGTTATCAAGGTTCATGTTAAGAAATGTGACTA
TAATGGCAAAATAAAATGCCCATATTTCGAGTTGGGTTGTCTCAATACGA
AAAAGTCGGTAAAGTCCACTGATCGTTTTATACAAAACACGATCAGGGTT
CATTGCATGCAAAAAGATTGTCCGTGGATTGGTTCCATCAAGGATTACGA
GGGAAGAGCCGAAGAAAAATCCAGAATTTCTTTGCAGTGTATGCATGACA
CCTTACAAAGTTCAAGACATGAGCGAAGGAAAACAGAGTCAATTTCGCCG
CGAAGAAGAGGAGATTGCCAAAGGTGCCAGAGCCATGGAGGATCCTAAAA
GATGTTCAATTTGTTTACAACCAAAAACTCCGAATTCTTCATCCAACAAG
TGTGATCAATGTTTGGATAAAATAAACAAAGTTCCAACAGGATTCGCTTT
CAGGGCGGTGGAAGGCCAGGGAGATAAAGAATTCGAATGTCCCATTTGTT
TGTGTTTAATCAAAGGAGCAACTGAGCTCCCTTGTGAACATTTGATGTGT
GGGGGATGTTTGCTTCACTATGAGAAAGGACAAACTGAGAAAGCGGAAAA
ATCACAACACCTACGATAATTTTAACAGGACAACTCGAGACATGAAATGG
ACAAAACATTCACATGATATAGCAAGTTATTCGAGTGGACATCAAGGTTC
ATGGTGTCTCAATGTTGCTGTCATCTTACCACCTTGGTGTAAAAACGTTT
ACATTCTTCATTGGAACAAAGAAGACAAAAAGTTGAAAATTCCACTCAAT
GGGACAGTTGTATCTTTGAAAGGAGATGATCAGTATTGCAGTGCTTTTGT
CATGTTACAAATTGAAGAGTAATTCGAGGTGCAAAATTTACCAAAACACA
ACGCAATGAATCGACAAATCCACGAAGCTTTGCTTTTGAACGTCGTAAAT
GTGTTGGCAAAAGAGAGACTAGAAAATCGAACACTCTTCGAAAACCAAAA
CAAAACAATCGAACGTTTAGAAGAAAGAATGGACAAAATTGAAGTAGAAA
ACAAGGATCTGCTGGACAAATATGAGACCCAATCCAATCTTCTCATAAAA
AATACTAAGGAAATCGAATCGTTGAAAAATGAAAATGCAAACTTAAACCA
AATGCTTCAACAACAAAATGACAATGTTTTGAATATTCATCAAAAACTTC
AATTATTAGAAAAGGAAAATCCTAAAGACATTGAAAAGACTTTAAAGGGA
CAGAGAAAAGATGTTGAAAATTTGAAAACATTTGCAAAGACCGTCGGTAA
ATTACATGGAACATTGAGTGACGTTAATGTAAGAGAGAATTTTCGAATAA
AAAAGTACCTTTACGATAAAGATTATATAAAAAATGGAGATGCAAAACAA
TGGAATGATTTTGTCCAACAAATCAATACAAACGAAGATTTCAATGGAGA
TTGTAATTACCTTCAACAAATGAAAAACGATGTGAATCGTTATCAAGGTT
CATGTTAAGAAATGTGACTATAATGGCAAAATAAAATGCCCATATTTCGA
GTTGGGTTGTCTCAATACGAAAAAGTCGGTAAAGTCCACTGATCGTTTTA
TACAAAACACGATCAGGGTTCATTGCATGCAAAAAGATTGTCCGTGGATT
GGTTCCATCAAGGATTACGAGGGAAGAGCCGAAGAAAAATCCAGAATTTC
TTTGCAGTGTATGCATGACACCTTACAAAGTTCAAGACATGAGCGAAGGA
AAACAGAGTCAATTTCGCCGCGAAGAAGAGGAGATTGCCAAAGGTGCCAG
AGCCATGGAGGATCCTAAAAGATGTTCAATTTGTTTACAACCAAAAACTC
CGAATTCTTCATCCAACAAGTGTGATCAATGTTTGGATAAAATAAACAAA
GTTCCAACAGGATTCGCTTTCAGGGCGGTGGAAGGCCAGGGAGATAAAGA
ATTCGAATGTCCCATTTGTTTGTGTTTAATCAAAGGAGCAACTGAGCTCC
CTTGTGAACATTTGATGTGTGGGGGATGTTTGCTTCACTATGAGAAAGGA
CAAACTGAGAAAGCGGAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006820XLOC_006820Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012132-proteinTCONS_00012132-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012132-exon-sc0000137-1575043694:517558..517917TCONS_00012132-exon-sc0000137-1575043694:517558..517917Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1575043694:516839..516905TCONS_00012132-exon-sc0000137-1575043694:516839..516905Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1575043694:516402..516503TCONS_00012132-exon-sc0000137-1575043694:516402..516503Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1575043694:514439..514510TCONS_00012132-exon-sc0000137-1575043694:514439..514510Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1575043694:513421..514045TCONS_00012132-exon-sc0000137-1575043694:513421..514045Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1575043694:512037..513291TCONS_00012132-exon-sc0000137-1575043694:512037..513291Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1510915933:517558..517917TCONS_00012132-exon-sc0000137-1510915933:517558..517917Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1510915933:516839..516905TCONS_00012132-exon-sc0000137-1510915933:516839..516905Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1510915933:516402..516503TCONS_00012132-exon-sc0000137-1510915933:516402..516503Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1510915933:514439..514510TCONS_00012132-exon-sc0000137-1510915933:514439..514510Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1510915933:513421..514045TCONS_00012132-exon-sc0000137-1510915933:513421..514045Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1510915933:512037..513291TCONS_00012132-exon-sc0000137-1510915933:512037..513291Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1491911889:517558..517917TCONS_00012132-exon-sc0000137-1491911889:517558..517917Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1491911889:516839..516905TCONS_00012132-exon-sc0000137-1491911889:516839..516905Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1491911889:516402..516503TCONS_00012132-exon-sc0000137-1491911889:516402..516503Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1491911889:514439..514510TCONS_00012132-exon-sc0000137-1491911889:514439..514510Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1491911889:513421..514045TCONS_00012132-exon-sc0000137-1491911889:513421..514045Clytia hemisphaericaexon
TCONS_00012132-exon-sc0000137-1491911889:512037..513291TCONS_00012132-exon-sc0000137-1491911889:512037..513291Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:512037..517917 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.32506 1.68428 2.33714 2.84487 2.48862 2.70851 3.5528 3.98431 1.94775 2.74318 3.42637 3.02742 6.68508 5.73604 9.00646 8.93105 3.35302 3.91863 8.36296 7.32063 3.83811 4.53108 2.58661 5.84609 4.37054 2.26496 1.427 0.631373 16.5661 15.0349
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR018957Znf_C3HC4_RING-type
IPR017907Znf_RING_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012132 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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