TCONS_00012097 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012097
Unique NameTCONS_00012097
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length121

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012097 ID=TCONS_00012097|Name=TCONS_00012097|organism=Clytia hemisphaerica|type=transcript|length=121bp
GCCAGTTGTCTGTCTGCTTACGTGTTGAATCCACCTGAAAGGAGCTTGGT
GATCGACGGATGTGCAGCACCTGGTAACAAAACAACTCATTTGGCGTGCA
TCTTGAATAACAATGGGTCTG
Run BLAST on NCBI

transcript from alignment at sc0000137:302715..303101+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012097 ID=TCONS_00012097|Name=TCONS_00012097|organism=Clytia hemisphaerica|type=transcript|length=387bp|location=Sequence derived from alignment at sc0000137:302715..303101+ (Clytia hemisphaerica)
GCCAGTTGTCTGTCTGCTTACGTGTTGAATCCACCTGAAAGGAGCTTGGT
GATCGACGGATGTGCAGCACCTGGTAACAAAACAACTCATTTGGCGTGCA
TCTTGAATAACAATGGGTAACTCTAATTCTAAGAAAATATCTACAGCTGG
GCATTTGATATGTCATATCAAAACACTTTGAATAATCAAAATGCATAcca
gtttttcagaattttttcaaTACCATTGGGAAATATATTTCCCACCTCGT
CATATGAACGTTTTTGTGGAAAAGAACTGTTACCTTTCACATATTTCAAT
CCAACTCTTTTTAAGAGCAGATCTCAGTCCCCAGCAACTGCATATCTGAT
TTCACTTCTTCCTCAATCTATACATTTTGTAGGTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006803XLOC_006803Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012097-exon-sc0000137-1491911889:302715..302830TCONS_00012097-exon-sc0000137-1491911889:302715..302830Clytia hemisphaericaexon
TCONS_00012097-exon-sc0000137-1510915933:302715..302830TCONS_00012097-exon-sc0000137-1510915933:302715..302830Clytia hemisphaericaexon
TCONS_00012097-exon-sc0000137-1575043694:302715..302830TCONS_00012097-exon-sc0000137-1575043694:302715..302830Clytia hemisphaericaexon
TCONS_00012097-exon-sc0000137-1491911889:303097..303101TCONS_00012097-exon-sc0000137-1491911889:303097..303101Clytia hemisphaericaexon
TCONS_00012097-exon-sc0000137-1510915933:303097..303101TCONS_00012097-exon-sc0000137-1510915933:303097..303101Clytia hemisphaericaexon
TCONS_00012097-exon-sc0000137-1575043694:303097..303101TCONS_00012097-exon-sc0000137-1575043694:303097..303101Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:302715..303101 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012097 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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