TCONS_00012087 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012087
Unique NameTCONS_00012087
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1669

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012087 ID=TCONS_00012087|Name=TCONS_00012087|organism=Clytia hemisphaerica|type=transcript|length=1669bp
AAAAAAAGAATGCAATATATCCTTCTAAAGATGAGAAGATTGACAGGAAA
TCGTCATTGGTGCAGGAATATCTTCTTATTCACAGCCTTCTGTTCGTTGT
CCATGTACCTATTGTACTTGACTGTGGGCGTGGGCGGAGAATCACAGGCG
GAGACTTATCACATGGAAAAGAAGGCCGGTGATGTAAAGATTGCTATCGT
GGATCAACACCAAGAAgTCATCCCGCATTGGTATCAAGCGATCAAGGATG
GTAAAATCGCATCCAGTACAAACACATTGATCCATTTCGACGGACACTCC
GACATGGCAACTCCTGAGAATTATGAAATCATCGAACAAACACTAATGCA
ACCAAACGAAAAAAGACACAAAAGTAAATCATACCTTCTCCCGCTCATGC
AAGCAAATGACCGTTTCATTACTTCCGCTGTTTTAACCGGTCTTATTGAC
CGTGTCATATGGGTTCAACCGGATTGGCTTCGTAAAGATACGGTCGAGAT
ACAAGTCGGATACATCGGTGAGACGACCAATGTCCAGGATCCTGAGAAAT
CCAAAACAGCGTGCATGTGTGTTAAGGAaattagaaaattgaaaaagcaa
aGGGAACACAAAGAAACACACAGGAAAGAAGAGCTAGCATGTTTCTATCT
GACTGAGGCACTTCACAATCAAACACAAATGGTCCCTCAGAAGTCATGCC
ACAAGGTTCACCCGTTGAAATATTTCGTTTTCAGTGAACGCAACTTCATG
CGCTACTTTCGCTCGCGGTCGCTGAAACCAGGTCACGTGTTCATCGATAT
CGATGAAGATTATTTTGGGGTGGAGGGCGGCGTCCAAAAAATGATCGATG
GCGGGATTCCTATGGATGTGATTTATATCACTGATGAAGTCATCCCGCAA
ATATATTGTCcgaattccataatggcggaaaaaGGATTGAACACAGCTCT
ACAAAACATGTTTCATGAGTTATATCTCTCAGACAAAAGAAGTGAATCGC
TCATTGAAGATGTTGTTATGAAACAtacgaaaaaatatttctgtGAAAAA
CAAGATAACACGTTTGTCCATCTCTTCATCAGCTATATACAAACACAGTC
CACAAAACAAGTACTGAAAGCCCTTTCTTCTACCAAGTACTGTTTATTCA
ATAGTTTACAACTCAGAGATGAATTACTTGGTACTAAAAATGATTTTGCG
CTTTGCCATGGCACTATATTCCCTAACGATACTCTTAATAAGATATACGT
CGATTCCAAAACTGGAATTGAGACCCGTCGTGATAATTTGTCTAAAATGT
TGGACTTCATATACGCGAGCACGCAACCACGTTTGATCACGATTGCACGT
TCTTTACGTGACGGTTACGTGCCCCGTGAGCAACAAAGATTCATTGAACG
TAACGTACGTAAAGCCGTTGACCAAACTTTGAGGAAAGTGAAAATGACTT
CAGAAACTATTTTTGATGAGAATctagtttttggtgaaaaaggCTGGGTg
taaatatatataatataattacTTTTCATAGgacatattttgaaattttt
atagaATTTTATTTAGAATTGAAATTTAGAAAGTTGTAAATATTTCTTCC
ATTTATGTTAGCATTtatattcattcattatatttACAGTTTTAGGACAG
TGCCTGAGCTTGCTGAAAC
Run BLAST on NCBI

protein sequence of TCONS_00012087-protein

>TCONS_00012087-protein ID=TCONS_00012087-protein|Name=TCONS_00012087-protein|organism=Clytia hemisphaerica|type=polypeptide|length=500bp
KKRMQYILLKMRRLTGNRHWCRNIFLFTAFCSLSMYLLYLTVGVGGESQA
ETYHMEKKAGDVKIAIVDQHQEVIPHWYQAIKDGKIASSTNTLIHFDGHS
DMATPENYEIIEQTLMQPNEKRHKSKSYLLPLMQANDRFITSAVLTGLID
RVIWVQPDWLRKDTVEIQVGYIGETTNVQDPEKSKTACMCVKEIRKLKKQ
REHKETHRKEELACFYLTEALHNQTQMVPQKSCHKVHPLKYFVFSERNFM
RYFRSRSLKPGHVFIDIDEDYFGVEGGVQKMIDGGIPMDVIYITDEVIPQ
IYCPNSIMAEKGLNTALQNMFHELYLSDKRSESLIEDVVMKHTKKYFCEK
QDNTFVHLFISYIQTQSTKQVLKALSSTKYCLFNSLQLRDELLGTKNDFA
LCHGTIFPNDTLNKIYVDSKTGIETRRDNLSKMLDFIYASTQPRLITIAR
SLRDGYVPREQQRFIERNVRKAVDQTLRKVKMTSETIFDENLVFGEKGWV
Run BLAST on NCBI

transcript from alignment at sc0000137:42481..49146+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012087 ID=TCONS_00012087|Name=TCONS_00012087|organism=Clytia hemisphaerica|type=transcript|length=6666bp|location=Sequence derived from alignment at sc0000137:42481..49146+ (Clytia hemisphaerica)
AAAAAAAGAATGCAATATATCCTTCTAAAGATGAGAAGATTGACAGGAAA TCGTCATTGGTGCAGGAATATCTTCTTATTCACAGCCTTCTGTTCGTTGT CCATGTACCTATTGTACTTGACTGTGGGCGTGGGCGGAGAATCACAGGCG GAGACTTATCACATGGAAAAGAAGGCCGGTGATGTAAAGATTGCTATCGT GGATCAACACCAAGAAggtactaaagtctgtctcaaaataatttgcagct gagacaaaaatgactgtgacttttgatagaatttgaatcaagttgcgatt ttgtgctcgttgaaaagatatttgtgagtggaatattatcaagcaaaaac atttgaaaaataaagaaaaatgaaaatgaaaaatgaagaagaaaaatatc aacttcttgtagaaatgtggtataattaccattttcacaggagtggttct tcaatctttgatcatcatcactgtcgaaaaaactttcaaaaatgctcatt caatcaaaagatatcaaacaaagtttattgctggttgactctataaagta gtaaaaaacgacaaaaaaacagccagGCTGCTAAGGCTCGAGCGCTGAAA TCAGCTAGATTTTTTTCGCTATCTTGCAAagtaaaacatttttagaaTGT CTAAGCATGGTAAACGACAGCCCTTGACCCACTGAGCATAAAAATGGTAT AATATCAGTGGTGCGGGTTTACgaacaattttcagaaaatgagctagaat gctaagcaaccccagccctgacctGAAAATTGGAGTTGTACGGTCAATAT TAAActacttttttatgattttactGATGGCGGACATGATACAATCATGA GGGCTATCAGAACCATATAAAATTGCACTAATAAGTGTTTACGATTTAGT ATCAAGGTATATTTGCATTAACATGCATAACATGTatataaataaaatac aaaatcacTGAAACGCTAAGCTACGCTTAATAAATGCGTCACccgtttgt taatttttcgattttttctaaAACATCTCTCCGACCTAATTAGAGCCTCT TAGCTTTTTAACTCATGAGCTGTCAAAAGCAAAGACCGCTAAACAGTCTG GTAGTAGGTAGAGTACTATTTATTCCCTTGCACCGGCAATAAGTTCCCAT CTGTTCACCCATGCTTGGTAGCTTCTTCCAAACGTACTCCTTAATACCAA AATCTGTAGAGGTCTTAGCTAAAACAATAATATGGTATGTATGGCCCATA CTTAAGCACCATCTAAAGCCATATTCATCCTCATTCACAAAATCTATTTG TTCCCATTTCAGTCATCCCGCATTGGTATCAAGCGATCAAGGATGGTAAA ATCGCATCCAGTACAAACACATTGGTAAGTTGAAAGGCTTAAGATTGAAT GGATGATtgttggtccagcgcgcagcagaatggacctttaaaaagcaact gatcgaaaagattttgtctttgtctgggcttgtgcgcgcaataaattaac aagtccaggctaaaccaaccgccgatctaaaatttttgccccgtctaccc gcgcgatgtttgacctatgttttggattgaattggtagtagagtcaaatt tcccggttagattaaagggttgtttcatgtagggtcaggtagggttaggg ctagggttggggatgggagttaacccctggttagggcTTTAGCCCCCGGg cagagtttggagtaaataccatgtttatgaGGAACTTTAAACTCCTCaat gcagttgtgactcgatggccgagtggttaaggcgctagCGTTTTAATCAT AGGTGCattgtatatagtgggttcgaatcccatcagcggcaaaagtttcg aaatttcaggaaatgcatcaaaaactttcaaaacttagcaatacaaagaa agtgtcaaagaatagaagctcagagtggaggatgggaaggaaattctttt gcgtcacttaaggaacccggtacaaacgacattcggttattgccatgtca gctggaccttcacgccgctccggcttcttgtgTTAATAGTTATTAGGCGT CTTCCATTAGGGAGGGgacttagaaaaaaacaattagtggcatatgtaca aaagctgccaaattatataaaaagaagaaaaaaatcaaaaattttgaccg ggGACCCTNGacttagaaaaagaaaattagaaagaaTTTAGTGGCATATG TATAAAAGctgccaaattatataaaaagaagaaaaaaataaaaaattttg acctGGGACCCTTTTCAGGGTCCCCCCGGGCCCCATTTCTGTGGGGTACT CAGTGCGACCCCGGACCAAAAATAGCCTAACACCAACTTTCTCAAAACAT AGTCATGTGGCATatcaaattatcagaaattttatgctgattccaAAAAA CATAGTACTAGGGGTCAGaaataaagctaaaaaaagTTATGACCATATCT TGAACCAGATTTTGAGTAAGTTGCATAATTCGCAAGAAATTCGAATAGAA TCTTGATTATGACTAACTATCATGTAGTTAGTAGTTAAACTTTGACATAA TTCTGGTTAATTGAATGTAACTGTTTTCATGATATGAAGacattttcagg tttatttaagttttctttGGAGAGAAGGATTATGAATGTAGACAAAGATG GTGAAGCTGAGGTACTTCGAACAAGAGcaaaagatattttatcaagCCAG AGATTGccaagtaaaaaatcaaaacaaacacataggaataaaaagttttc aattgCAAAGAGCATCACAAACTGCTACACGATTGGACAGATGAATGTAA AGATTGTAATACCTGTGTAAATTTTGAGATGTTGGAAAGATAACCTTTGG ATGTTCTATCAAATGCCAAGAAAGCGTTAGAATATCTATTCACCACTAAG ATAAGGTCAATACAGGAAAgaataagaattttgaaaaaactgttgCAAAG GGTGTTGTATTGCAATGGattttttgcaatgtttatccaaAGAACTATTG AACAGTGGAGCACAATATCAAAAGATTATTattacaattttataaataat taaaataatatataaatagTTATGAATCATTGAAAAAAGAAGCACTTCGA AAAAACCAGATGATTACTGGCCTAAGTTTGAGAAATACAGCAAATAGGTT AAAGAATTGTTTGACATTATTGGTAAGATTTCTCTTTGATTATTGACTAG TCCTTTGCTAGGGCAAATTCTCTCCGAACTGACAGTGATATCCAATtcga tttttttgtaatttttgtttaggTATACAAGTTGAGTTTAATCCATAGAC CATGATTTATGGCACCTTTAAAGTTTACATTTGCAGGATGCAGAATGAGG AGGCAGAATGGCAAGAGGTTGAGTTCAAGGGGGTGGGTTATCAAAATGGG TTAACAATATATTTTGAAGGCACCAGATCAGCTACCAGTATCTCAATGGC AAGTCTTAAGAGCATCCTCAGGGAATTGGAAAGTTAAAAAGAGAGAGAGT CTATCAGTGAAACTGGTACGAAACCCTTCTACTGGCATTTGTTTCTGGTT ATTGTAAAATGTCCAGTCATTTTGCCACATTTTTACACCCAGGTTGTTTC TTGTAGCCTTACCCTttcttttgaacttttaaattaaatttagcaCCAAT CAATGACTGTACCCTACAATGccttttcaaatgaaatgtAAACTTTAAAG GTGCCATCATGATCTATGGATTGAACTCAACTTGTATACCTaaacgaaaa ttgcaaagaatTGAATTGGATATCACTGTCAGTCCTAGGAGTGAATTTGC CCTAGCAATGGACTATTCAATAATCAAAGAGAAATCTCTCCAACAATGTC AAACAATTCTTTAACTTATTTGCTTAAAATCATCTGTATTTTTGAAgtgc ttctttttttcaataattcataATTATTTAATAATGTTTTAATATCGTGC TCCAATGTTCCATAGTTCTTTGGATAAACATCCAAAAAATCCATTGCAAT ACAACACCCTTTTCAACagctttttcaaaattctcattctttcctGTATT GACCATCTTAGTGGCGTGAATAGATATTCCAACACTTTCTTGGCATTTGG TAAGGACATCCAAAGGTTATCTTTACATTCATTCTGTCCACTCATGTGGC AGTTTGTGATGCTCATtacaattgaaaaactttttattccttgatttttt actttgcaatttctggcttgataaaatatattttgcttTTGTTCGAAGTA CCTCAGCTTCACCATCTTTGTCTACATTCATAATCCTTCTCTCCaaagaa aacttaaataaacctgaaaatgtCTTCATATCATGAAAACAGTTACATCC AATAAACCagaattttgtcaaagtttAACTACTAACTACATGAAATGTCA GTCATAATCAAGATTCCATTCAAATTTCTTGCGAATTATGCAATTTACTC AAAATCTGGTCCAAGATATGGTCATAActttttttagctttatttctgac ccctactactaatgttttttggaatcagcatagaatttctgataatttga tACGCCACATGACTGTGTTTTAAGAAAGTTGGTGTTAGGCTATTTTTGGT TCGGGGTCGCGCTGAGTACCCCGCAGAAATGGGGCCCGGGGGGACCCTGA AAAGGGTCcccggtcaaaatttttgatttttttcttctttttatataatt tggcagcttttgtacatatgccactaaattctttctaattttcttttttt aagtccCCTCCCTACTTCCATGATTCGAATTTTTCGAACTATAGAGATAC TAATTGGATATTAGACAGGAGACTCTTCCtgcattttcataatctgataT ATAAAGCATACAGTGTTAGCATAACTGGTAAAACGTTAGTGGAACTTTCG ATCAAGCTCAGTTACAATCTCGCAACCAGAGTCCACGTCCAGGGGCGGAT TTAATATATTTTCGGACCATATGAAAGATCCAATTTTCCCGATTCGGATA ACGAAAACCCCGATAATTTCcccgaaaaaataagaaaaagagcAGGGGGT TTGGGGGGCGCTCTATGGCCCTGGTGGGGGTTCAGGGGGCGAAGCGGAGA GCCATTTGCACAAATtcttttactgatggacgtaaTACAATAGTGACCAC TATCAGTGtcataaaattcaaaagtaaactatgtaagggactgggttcga atTTTCTCAGTTAGGAAAGTCTGATAAATGGAATGCAGCCtacaaatgaa aattaattacCTTAATTTTTCACTAGATCCATTTCGACGGACACTCCGAC ATGGCAACTCCTGAGAATTATGAAATCATCGAACAAACACTAATGCAACC AAACGAAAAAAGACACAAAAGTAAATCATACCTTCTCCCGCTCATGCAAG CAAATGACCGTTTCATTACTTCCGCTGTTTTAACCGGTCTTATTGACCGT GTCATATGGGTTCAACCGGATTGGCTTCGTAAAGATACGGTCGAGATACA AGTCGGATACATCGGTGAGACGACCAATGTCCAGGATCCTGAGAAATCCA AAACAGCGTGCATGTGTGTTAAGGAaattagaaaattgaaaaagcaaaGG GAACACAAAGAAACACACAGGAAAGAAGAGCTAGCATGTTTCTATCTGAC TGAGGCACTTCACAATCAAACACAAATGGTCCCTCAGAAGTCATGCCACA AGGTTCACCCGTTGAAATATTTCGTTTTCAGTGAACGCAACTTCATGCGC TACTTTCGCTCGCGGTCGCTGAAACCAGGTCACGTGTTCATCGATATCGA TGAAGATTATTTTGGGGTGGAGGGCGGCGTCCAAAAAATGATCGATGGCG GGATTCCTATGGATGTGATTTATATCACTGATGAAGTCATCCCGCAAATA TATTGTCcgaattccataatggcggaaaaaGGATTGAACACAGCTCTACA AAACATGTTTCATGAGTTATATCTCTCAGACAAAAGAAGTGAATCGCTCA TTGAAGATGTTGTTATGAAACAtacgaaaaaatatttctgtGAAAAACAA GATAACACGTTTGTCCATCTCTTCATCAGCTATATACAAACACAGTCCAC AAAACAAGTACTGAAAGCCCTTTCTTCTACCAAGTACTGTTTATTCAATA GTTTACAACTCAGAGATGAATTACTTGGTACTAAAAATGATTTTGCGCTT TGCCATGGCACTATATTCCCTAACGATACTCTTAATAAGATATACGTCGA TTCCAAAACTGGAATTGAGACCCGTCGTGATAATTTGTCTAAAATGTTGG ACTTCATATACGCGAGCACGCAACCACGTTTGATCACGATTGCACGTTCT TTACGTGACGGTTACGTGCCCCGTGAGCAACAAAGATTCATTGAACGTAA CGTACGTAAAGCCGTTGACCAAACTTTGAGGAAAGTGAAAATGACTTCAG AAACTATTTTTGATGAGAATctagtttttggtgaaaaaggCTGGGTgtaa atatatataatataattacTTTTCATAGgacatattttgaaatttttata gaATTTTATTTAGAATTGAAATTTAGAAAGTTGTAAATATTTCTTCCATT TATGTTAGCATTtatattcattcattatatttACAGTTTTAGGACAGTGC CTGAGCTTGCTGAAAC

Coding sequence (CDS) from alignment at sc0000137:42481..49146+

>TCONS_00012087 ID=TCONS_00012087|Name=TCONS_00012087|organism=Clytia hemisphaerica|type=CDS|length=4509bp|location=Sequence derived from alignment at sc0000137:42481..49146+ (Clytia hemisphaerica)
AAAAAAAGAATGCAATATATCCTTCTAAAGATGAGAAGATTGACAGGAAA
TCGTCATTGGTGCAGGAATATCTTCTTATTCACAGCCTTCTGTTCGTTGT
CCATGTACCTATTGTACTTGACTGTGGGCGTGGGCGGAGAATCACAGGCG
GAGACTTATCACATGGAAAAGAAGGCCGGTGATGTAAAGATTGCTATCGT
GGATCAACACCAAGAAgTCATCCCGCATTGGTATCAAGCGATCAAGGATG
GTAAAATCGCATCCAGTACAAACACATTGATCCATTTCGACGGACACTCC
GACATGGCAACTCCTGAGAATTATGAAATCATCGAACAAACACTAATGCA
ACCAAACGAAAAAAGACACAAAAGTAAATCATACCTTCTCCCGCTCATGC
AAGCAAATGACCGTTTCATTACTTCCGCTGTTTTAACCGGTCTTATTGAC
CGTGTCATATGGGTTCAACCGGATTGGCTTCGTAAAGATACGGTCGAGAT
ACAAGTCGGATACATCGGTGAGACGACCAATGTCCAGGATCCTGAGAAAT
CCAAAACAGCGTGCATGTGTGTTAAGGAaattagaaaattgaaaaagcaa
aGGGAACACAAAGAAACACACAGGAAAGAAGAGCTAGCATGTTTCTATCT
GACTGAGGCACTTCACAATCAAACACAAATGGTCCCTCAGAAGTCATGCC
ACAAGGTTCACCCGTTGAAATATTTCGTTTTCAGTGAACGCAACTTCATG
CGCTACTTTCGCTCGCGGTCGCTGAAACCAGGTCACGTGTTCATCGATAT
CGATGAAGATTATTTTGGGGTGGAGGGCGGCGTCCAAAAAATGATCGATG
GCGGGATTCCTATGGATGTGATTTATATCACTGATGAAGTCATCCCGCAA
ATATATTGTCcgaattccataatggcggaaaaaGGATTGAACACAGCTCT
ACAAAACATGTTTCATGAGTTATATCTCTCAGACAAAAGAAGTGAATCGC
TCATTGAAGATGTTGTTATGAAACAtacgaaaaaatatttctgtGAAAAA
CAAGATAACACGTTTGTCCATCTCTTCATCAGCTATATACAAACACAGTC
CACAAAACAAGTACTGAAAGCCCTTTCTTCTACCAAGTACTGTTTATTCA
ATAGTTTACAACTCAGAGATGAATTACTTGGTACTAAAAATGATTTTGCG
CTTTGCCATGGCACTATATTCCCTAACGATACTCTTAATAAGATATACGT
CGATTCCAAAACTGGAATTGAGACCCGTCGTGATAATTTGTCTAAAATGT
TGGACTTCATATACGCGAGCACGCAACCACGTTTGATCACGATTGCACGT
TCTTTACGTGACGGTTACGTGCCCCGTGAGCAACAAAGATTCATTGAACG
TAACGTACGTAAAGCCGTTGACCAAACTTTGAGGAAAGTGAAAATGACTT
CAGAAACTATTTTTGATGAGAATctagtttttggtgaaaaaggCTGGGTg
taaAAAAAAAGAATGCAATATATCCTTCTAAAGATGAGAAGATTGACAGG
AAATCGTCATTGGTGCAGGAATATCTTCTTATTCACAGCCTTCTGTTCGT
TGTCCATGTACCTATTGTACTTGACTGTGGGCGTGGGCGGAGAATCACAG
GCGGAGACTTATCACATGGAAAAGAAGGCCGGTGATGTAAAGATTGCTAT
CGTGGATCAACACCAAGAAgTCATCCCGCATTGGTATCAAGCGATCAAGG
ATGGTAAAATCGCATCCAGTACAAACACATTGATCCATTTCGACGGACAC
TCCGACATGGCAACTCCTGAGAATTATGAAATCATCGAACAAACACTAAT
GCAACCAAACGAAAAAAGACACAAAAGTAAATCATACCTTCTCCCGCTCA
TGCAAGCAAATGACCGTTTCATTACTTCCGCTGTTTTAACCGGTCTTATT
GACCGTGTCATATGGGTTCAACCGGATTGGCTTCGTAAAGATACGGTCGA
GATACAAGTCGGATACATCGGTGAGACGACCAATGTCCAGGATCCTGAGA
AATCCAAAACAGCGTGCATGTGTGTTAAGGAaattagaaaattgaaaaag
caaaGGGAACACAAAGAAACACACAGGAAAGAAGAGCTAGCATGTTTCTA
TCTGACTGAGGCACTTCACAATCAAACACAAATGGTCCCTCAGAAGTCAT
GCCACAAGGTTCACCCGTTGAAATATTTCGTTTTCAGTGAACGCAACTTC
ATGCGCTACTTTCGCTCGCGGTCGCTGAAACCAGGTCACGTGTTCATCGA
TATCGATGAAGATTATTTTGGGGTGGAGGGCGGCGTCCAAAAAATGATCG
ATGGCGGGATTCCTATGGATGTGATTTATATCACTGATGAAGTCATCCCG
CAAATATATTGTCcgaattccataatggcggaaaaaGGATTGAACACAGC
TCTACAAAACATGTTTCATGAGTTATATCTCTCAGACAAAAGAAGTGAAT
CGCTCATTGAAGATGTTGTTATGAAACAtacgaaaaaatatttctgtGAA
AAACAAGATAACACGTTTGTCCATCTCTTCATCAGCTATATACAAACACA
GTCCACAAAACAAGTACTGAAAGCCCTTTCTTCTACCAAGTACTGTTTAT
TCAATAGTTTACAACTCAGAGATGAATTACTTGGTACTAAAAATGATTTT
GCGCTTTGCCATGGCACTATATTCCCTAACGATACTCTTAATAAGATATA
CGTCGATTCCAAAACTGGAATTGAGACCCGTCGTGATAATTTGTCTAAAA
TGTTGGACTTCATATACGCGAGCACGCAACCACGTTTGATCACGATTGCA
CGTTCTTTACGTGACGGTTACGTGCCCCGTGAGCAACAAAGATTCATTGA
ACGTAACGTACGTAAAGCCGTTGACCAAACTTTGAGGAAAGTGAAAATGA
CTTCAGAAACTATTTTTGATGAGAATctagtttttggtgaaaaaggCTGG
GTgtaaAAAAAAAGAATGCAATATATCCTTCTAAAGATGAGAAGATTGAC
AGGAAATCGTCATTGGTGCAGGAATATCTTCTTATTCACAGCCTTCTGTT
CGTTGTCCATGTACCTATTGTACTTGACTGTGGGCGTGGGCGGAGAATCA
CAGGCGGAGACTTATCACATGGAAAAGAAGGCCGGTGATGTAAAGATTGC
TATCGTGGATCAACACCAAGAAgTCATCCCGCATTGGTATCAAGCGATCA
AGGATGGTAAAATCGCATCCAGTACAAACACATTGATCCATTTCGACGGA
CACTCCGACATGGCAACTCCTGAGAATTATGAAATCATCGAACAAACACT
AATGCAACCAAACGAAAAAAGACACAAAAGTAAATCATACCTTCTCCCGC
TCATGCAAGCAAATGACCGTTTCATTACTTCCGCTGTTTTAACCGGTCTT
ATTGACCGTGTCATATGGGTTCAACCGGATTGGCTTCGTAAAGATACGGT
CGAGATACAAGTCGGATACATCGGTGAGACGACCAATGTCCAGGATCCTG
AGAAATCCAAAACAGCGTGCATGTGTGTTAAGGAaattagaaaattgaaa
aagcaaaGGGAACACAAAGAAACACACAGGAAAGAAGAGCTAGCATGTTT
CTATCTGACTGAGGCACTTCACAATCAAACACAAATGGTCCCTCAGAAGT
CATGCCACAAGGTTCACCCGTTGAAATATTTCGTTTTCAGTGAACGCAAC
TTCATGCGCTACTTTCGCTCGCGGTCGCTGAAACCAGGTCACGTGTTCAT
CGATATCGATGAAGATTATTTTGGGGTGGAGGGCGGCGTCCAAAAAATGA
TCGATGGCGGGATTCCTATGGATGTGATTTATATCACTGATGAAGTCATC
CCGCAAATATATTGTCcgaattccataatggcggaaaaaGGATTGAACAC
AGCTCTACAAAACATGTTTCATGAGTTATATCTCTCAGACAAAAGAAGTG
AATCGCTCATTGAAGATGTTGTTATGAAACAtacgaaaaaatatttctgt
GAAAAACAAGATAACACGTTTGTCCATCTCTTCATCAGCTATATACAAAC
ACAGTCCACAAAACAAGTACTGAAAGCCCTTTCTTCTACCAAGTACTGTT
TATTCAATAGTTTACAACTCAGAGATGAATTACTTGGTACTAAAAATGAT
TTTGCGCTTTGCCATGGCACTATATTCCCTAACGATACTCTTAATAAGAT
ATACGTCGATTCCAAAACTGGAATTGAGACCCGTCGTGATAATTTGTCTA
AAATGTTGGACTTCATATACGCGAGCACGCAACCACGTTTGATCACGATT
GCACGTTCTTTACGTGACGGTTACGTGCCCCGTGAGCAACAAAGATTCAT
TGAACGTAACGTACGTAAAGCCGTTGACCAAACTTTGAGGAAAGTGAAAA
TGACTTCAGAAACTATTTTTGATGAGAATctagtttttggtgaaaaaggC
TGGGTgtaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006798XLOC_006798Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012087-proteinTCONS_00012087-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012087-exon-sc0000137-1491911889:42481..42697TCONS_00012087-exon-sc0000137-1491911889:42481..42697Clytia hemisphaericaexon
TCONS_00012087-exon-sc0000137-1510915933:42481..42697TCONS_00012087-exon-sc0000137-1510915933:42481..42697Clytia hemisphaericaexon
TCONS_00012087-exon-sc0000137-1575043694:42481..42697TCONS_00012087-exon-sc0000137-1575043694:42481..42697Clytia hemisphaericaexon
TCONS_00012087-exon-sc0000137-1491911889:43793..43854TCONS_00012087-exon-sc0000137-1491911889:43793..43854Clytia hemisphaericaexon
TCONS_00012087-exon-sc0000137-1510915933:43793..43854TCONS_00012087-exon-sc0000137-1510915933:43793..43854Clytia hemisphaericaexon
TCONS_00012087-exon-sc0000137-1575043694:43793..43854TCONS_00012087-exon-sc0000137-1575043694:43793..43854Clytia hemisphaericaexon
TCONS_00012087-exon-sc0000137-1491911889:47757..49146TCONS_00012087-exon-sc0000137-1491911889:47757..49146Clytia hemisphaericaexon
TCONS_00012087-exon-sc0000137-1510915933:47757..49146TCONS_00012087-exon-sc0000137-1510915933:47757..49146Clytia hemisphaericaexon
TCONS_00012087-exon-sc0000137-1575043694:47757..49146TCONS_00012087-exon-sc0000137-1575043694:47757..49146Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000137supercontigsc0000137:42481..49146 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.354017 0.470755 0.282617 0.188424 0.753702 1.0993 14.2952 17.1919 11.783 11.0625 8.74514 4.14156 3.61821 3.4732 5.65191 6.14282 5.74023 2.89619 1.70486 1.43155 2.49041 2.68159 3.5696 5.77871 4.57045 4.92624 0.6138 0.284479 3.16223 2.23124
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR024131UPF0489
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012087 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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