TCONS_00012085 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012085
Unique NameTCONS_00012085
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012085 ID=TCONS_00012085|Name=TCONS_00012085|organism=Clytia hemisphaerica|type=transcript|length=159bp
CTCGAACGAAGAAAACAATAAGATTAAGTAATGTATAGATTGCTGTGAGG
TTACcgattgtagaaaaaaaaaattagatataaCGTGTATAAAATATTGC
CAGACTACGATctaataaatacttttttaaaatattgcgaAATTTTTTGT
GATCAGGTT
Run BLAST on NCBI

transcript from alignment at sc0000136:550726..550884

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012085 ID=TCONS_00012085|Name=TCONS_00012085|organism=Clytia hemisphaerica|type=transcript|length=159bp|location=Sequence derived from alignment at sc0000136:550726..550884 (Clytia hemisphaerica)
AACCTGATCACAAAAAATTtcgcaatattttaaaaaagtatttattagAT
CGTAGTCTGGCAATATTTTATACACGttatatctaattttttttttctac
aatcgGTAACCTCACAGCAATCTATACATTACTTAATCTTATTGTTTTCT
TCGTTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_006796XLOC_006796Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012085-exon-sc0000136-1491911889:550726..550884TCONS_00012085-exon-sc0000136-1491911889:550726..550884Clytia hemisphaericaexon
TCONS_00012085-exon-sc0000136-1510915933:550726..550884TCONS_00012085-exon-sc0000136-1510915933:550726..550884Clytia hemisphaericaexon
TCONS_00012085-exon-sc0000136-1575043694:550726..550884TCONS_00012085-exon-sc0000136-1575043694:550726..550884Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000136supercontigsc0000136:550726..550884 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00012085 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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